EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016606 (Gene tree)
Gene ID: 110304810
Gene Symbol: Ybx2
Alias: MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5775 bases
Position: chr11:64686225-64691999
Accession: 110304810
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0027691	CSD	PF00313.22	9.3e-26	1	1
MGP_CAROLIEiJ_P0027689	CSD	PF00313.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0027690	-	1235	-	MGP_CAROLIEiJ_P0027690	164 (aa)	-	UPI000268B501
MGP_CAROLIEiJ_T0027691	-	1351	-	MGP_CAROLIEiJ_P0027691	282 (aa)	-	UPI00001E5E3C
MGP_CAROLIEiJ_T0027692	-	489	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0027693	-	679	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0027689	-	1673	XM_021176418	MGP_CAROLIEiJ_P0027689	359 (aa)	XP_021032077	UPI0000192A86

Gene Model

Click here to download MGP_CAROLIEiJ_G0016606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016606	Ybx2	96	89.493	ENSG00000006047	YBX2	99	87.654	Homo_sapiens
MGP_CAROLIEiJ_G0016606	Ybx2	57	90.000	ENSAMEG00000016564	YBX2	87	91.146	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.074	ENSANAG00000019540	YBX2	86	93.836	Aotus_nancymaae
MGP_CAROLIEiJ_G0016606	Ybx2	100	96.667	ENSBTAG00000009126	YBX2	100	96.667	Bos_taurus
MGP_CAROLIEiJ_G0016606	Ybx2	96	90.370	ENSCJAG00000016581	-	84	90.728	Callithrix_jacchus
MGP_CAROLIEiJ_G0016606	Ybx2	99	88.889	ENSCJAG00000042146	-	99	88.889	Callithrix_jacchus
MGP_CAROLIEiJ_G0016606	Ybx2	90	77.953	ENSCAFG00000005162	-	90	77.953	Canis_familiaris
MGP_CAROLIEiJ_G0016606	Ybx2	100	95.095	ENSCAFG00000016128	-	100	95.095	Canis_familiaris
MGP_CAROLIEiJ_G0016606	Ybx2	96	91.697	ENSCAFG00020008884	YBX2	84	92.557	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016606	Ybx2	96	96.667	ENSCHIG00000016407	YBX2	84	97.020	Capra_hircus
MGP_CAROLIEiJ_G0016606	Ybx2	95	91.544	ENSTSYG00000030765	YBX2	92	90.876	Carlito_syrichta
MGP_CAROLIEiJ_G0016606	Ybx2	95	96.629	ENSCAPG00000011432	YBX2	100	96.629	Cavia_aperea
MGP_CAROLIEiJ_G0016606	Ybx2	99	95.357	ENSCPOG00000009543	YBX2	99	95.357	Cavia_porcellus
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.815	ENSCCAG00000025671	YBX2	89	93.671	Cebus_capucinus
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.074	ENSCATG00000036919	YBX2	84	94.371	Cercocebus_atys
MGP_CAROLIEiJ_G0016606	Ybx2	99	95.714	ENSCLAG00000010306	YBX2	99	95.714	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.074	ENSCSAG00000011857	YBX2	84	94.371	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016606	Ybx2	97	67.754	ENSCPBG00000022288	YBX2	81	72.093	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016606	Ybx2	98	91.636	ENSCANG00000007129	YBX2	99	91.971	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016606	Ybx2	100	98.886	ENSCGRG00001000751	Ybx2	100	98.886	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016606	Ybx2	96	98.162	ENSCGRG00000007683	Ybx2	99	98.519	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016606	Ybx2	95	95.896	ENSDNOG00000013746	YBX2	87	95.896	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016606	Ybx2	100	95.035	ENSDORG00000010882	Ybx2	99	96.057	Dipodomys_ordii
MGP_CAROLIEiJ_G0016606	Ybx2	93	91.221	ENSEASG00005018928	YBX2	83	91.837	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016606	Ybx2	96	89.299	ENSECAG00000009996	YBX2	79	90.099	Equus_caballus
MGP_CAROLIEiJ_G0016606	Ybx2	96	97.407	ENSFCAG00000018097	YBX2	85	96.689	Felis_catus
MGP_CAROLIEiJ_G0016606	Ybx2	96	67.399	ENSGAGG00000016159	YBX2	94	72.161	Gopherus_agassizii
MGP_CAROLIEiJ_G0016606	Ybx2	96	91.111	ENSGGOG00000007399	YBX2	84	92.053	Gorilla_gorilla
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.444	ENSHGLG00000014186	YBX2	84	94.371	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016606	Ybx2	95	98.507	ENSSTOG00000008630	YBX2	99	97.778	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016606	Ybx2	100	95.745	ENSJJAG00000013072	Ybx2	100	95.745	Jaculus_jaculus
MGP_CAROLIEiJ_G0016606	Ybx2	100	97.222	ENSLAFG00000014006	YBX2	100	97.222	Loxodonta_africana
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.074	ENSMFAG00000039921	YBX2	84	94.371	Macaca_fascicularis
MGP_CAROLIEiJ_G0016606	Ybx2	96	94.074	ENSMNEG00000045221	YBX2	84	94.371	Macaca_nemestrina
MGP_CAROLIEiJ_G0016606	Ybx2	99	71.685	ENSMLEG00000029266	-	84	74.101	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016606	Ybx2	98	92.727	ENSMLEG00000039452	YBX2	99	93.066	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016606	Ybx2	100	98.886	ENSMAUG00000022062	Ybx2	100	98.886	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016606	Ybx2	98	95.273	ENSMICG00000012453	YBX2	99	95.620	Microcebus_murinus
MGP_CAROLIEiJ_G0016606	Ybx2	100	98.886	ENSMOCG00000013958	Ybx2	100	98.886	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016606	Ybx2	96	76.875	ENSMODG00000017596	YBX2	81	88.294	Monodelphis_domestica
MGP_CAROLIEiJ_G0016606	Ybx2	100	100.000	ENSMUSG00000018554	Ybx2	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0016606	Ybx2	100	100.000	MGP_PahariEiJ_G0017737	Ybx2	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0016606	Ybx2	100	100.000	MGP_SPRETEiJ_G0017442	Ybx2	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0016606	Ybx2	87	91.870	ENSMPUG00000010386	YBX2	93	91.870	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016606	Ybx2	96	89.630	ENSMLUG00000004686	YBX2	90	89.404	Myotis_lucifugus
MGP_CAROLIEiJ_G0016606	Ybx2	100	95.543	ENSNGAG00000011707	Ybx2	100	95.543	Nannospalax_galili
MGP_CAROLIEiJ_G0016606	Ybx2	96	92.593	ENSNLEG00000008063	-	100	93.000	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016606	Ybx2	96	87.778	ENSMEUG00000006947	YBX2	90	86.755	Notamacropus_eugenii
MGP_CAROLIEiJ_G0016606	Ybx2	96	90.000	ENSOPRG00000013773	YBX2	99	90.657	Ochotona_princeps
MGP_CAROLIEiJ_G0016606	Ybx2	100	93.972	ENSODEG00000017530	YBX2	100	93.972	Octodon_degus
MGP_CAROLIEiJ_G0016606	Ybx2	90	95.652	ENSOCUG00000015064	YBX2	95	87.248	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016606	Ybx2	95	97.015	ENSOGAG00000004392	YBX2	100	97.015	Otolemur_garnettii
MGP_CAROLIEiJ_G0016606	Ybx2	97	96.703	ENSOARG00000011562	YBX2	78	96.029	Ovis_aries
MGP_CAROLIEiJ_G0016606	Ybx2	96	89.493	ENSPPAG00000041892	YBX2	100	90.033	Pan_paniscus
MGP_CAROLIEiJ_G0016606	Ybx2	100	96.111	ENSPPRG00000000782	YBX2	100	96.111	Panthera_pardus
MGP_CAROLIEiJ_G0016606	Ybx2	94	90.977	ENSPTRG00000051288	-	85	90.977	Pan_troglodytes
MGP_CAROLIEiJ_G0016606	Ybx2	96	89.493	ENSPTRG00000008673	YBX2	89	96.104	Pan_troglodytes
MGP_CAROLIEiJ_G0016606	Ybx2	96	70.111	ENSPANG00000032747	-	74	67.230	Papio_anubis
MGP_CAROLIEiJ_G0016606	Ybx2	96	93.704	ENSPANG00000024250	YBX2	84	94.314	Papio_anubis
MGP_CAROLIEiJ_G0016606	Ybx2	95	70.652	ENSPSIG00000012364	YBX2	99	74.275	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016606	Ybx2	87	89.796	ENSPCIG00000028819	YBX2	85	91.213	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016606	Ybx2	96	95.556	ENSPCAG00000008019	YBX2	84	95.033	Procavia_capensis
MGP_CAROLIEiJ_G0016606	Ybx2	96	95.556	ENSPCOG00000006030	YBX2	84	95.033	Propithecus_coquereli
MGP_CAROLIEiJ_G0016606	Ybx2	100	86.981	ENSPVAG00000005050	YBX2	100	86.981	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016606	Ybx2	100	99.443	ENSRNOG00000017117	Ybx2	100	99.443	Rattus_norvegicus
MGP_CAROLIEiJ_G0016606	Ybx2	96	93.704	ENSRBIG00000040919	YBX2	85	94.040	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016606	Ybx2	100	83.333	ENSRROG00000041728	YBX2	99	84.229	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016606	Ybx2	100	91.844	ENSSBOG00000029566	YBX2	100	91.844	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016606	Ybx2	90	91.304	ENSSHAG00000007786	YBX2	95	86.000	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016606	Ybx2	100	96.111	ENSSARG00000000488	YBX2	100	96.111	Sorex_araneus
MGP_CAROLIEiJ_G0016606	Ybx2	94	67.897	ENSSPUG00000018250	YBX2	94	72.426	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016606	Ybx2	100	96.944	ENSSSCG00000017938	YBX2	100	96.944	Sus_scrofa
MGP_CAROLIEiJ_G0016606	Ybx2	96	93.704	ENSTBEG00000001266	YBX2	89	93.667	Tupaia_belangeri
MGP_CAROLIEiJ_G0016606	Ybx2	60	98.462	ENSTTRG00000009780	YBX2	56	98.969	Tursiops_truncatus
MGP_CAROLIEiJ_G0016606	Ybx2	92	91.353	ENSUAMG00000014725	YBX2	100	91.353	Ursus_americanus
MGP_CAROLIEiJ_G0016606	Ybx2	87	89.683	ENSUMAG00000015222	YBX2	90	89.683	Ursus_maritimus
MGP_CAROLIEiJ_G0016606	Ybx2	87	78.455	ENSVPAG00000003104	-	100	78.455	Vicugna_pacos
MGP_CAROLIEiJ_G0016606	Ybx2	93	90.672	ENSVVUG00000027830	-	100	90.672	Vulpes_vulpes
MGP_CAROLIEiJ_G0016606	Ybx2	98	80.505	ENSVVUG00000012111	-	83	80.505	Vulpes_vulpes