EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016684 (Gene tree)
Gene ID: 110304943
Gene Symbol: Ncbp3
Alias: 1200014J11Rik
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 40047 bases
Position: chr11:67760674-67800720
Accession: 110304943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0028091	NCBP3	PF10309.9	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0028093	-	3576	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028092	-	2328	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028091	-	11771	-	MGP_CAROLIEiJ_P0028091	615 (aa)	XP_021032304	UPI000A3187C8

Gene Model

Click here to download MGP_CAROLIEiJ_G0016684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.729	ENSG00000074356	NCBP3	98	93.564	Homo_sapiens
MGP_CAROLIEiJ_G0016684	Ncbp3	99	57.746	ENSAPOG00000020809	ncbp3	98	58.214	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	88.618	ENSAMEG00000009372	NCBP3	98	88.943	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016684	Ncbp3	98	54.414	ENSACIG00000024257	ncbp3	98	56.311	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	58.372	ENSAPEG00000020857	ncbp3	98	58.162	Amphiprion_percula
MGP_CAROLIEiJ_G0016684	Ncbp3	98	56.583	ENSATEG00000010801	ncbp3	98	58.202	Anabas_testudineus
MGP_CAROLIEiJ_G0016684	Ncbp3	90	79.335	ENSAPLG00000007373	NCBP3	98	79.606	Anas_platyrhynchos
MGP_CAROLIEiJ_G0016684	Ncbp3	99	67.370	ENSANAG00000020550	-	97	67.276	Aotus_nancymaae
MGP_CAROLIEiJ_G0016684	Ncbp3	98	86.964	ENSANAG00000024918	-	98	87.500	Aotus_nancymaae
MGP_CAROLIEiJ_G0016684	Ncbp3	99	58.648	ENSACLG00000000455	ncbp3	98	58.427	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016684	Ncbp3	98	55.655	ENSAMXG00000005968	ncbp3	98	58.012	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	91.847	ENSBTAG00000016621	NCBP3	98	91.681	Bos_taurus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	91.792	ENSCAFG00000019371	NCBP3	95	91.792	Canis_familiaris
MGP_CAROLIEiJ_G0016684	Ncbp3	97	91.792	ENSCAFG00020008143	NCBP3	95	91.792	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016684	Ncbp3	100	92.520	ENSCHIG00000009002	NCBP3	98	92.013	Capra_hircus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.388	ENSTSYG00000008184	NCBP3	98	93.388	Carlito_syrichta
MGP_CAROLIEiJ_G0016684	Ncbp3	88	92.336	ENSCAPG00000016045	NCBP3	95	92.336	Cavia_aperea
MGP_CAROLIEiJ_G0016684	Ncbp3	98	92.562	ENSCPOG00000015529	NCBP3	98	92.562	Cavia_porcellus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.069	ENSCCAG00000021154	NCBP3	98	92.904	Cebus_capucinus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	93.012	ENSCATG00000013041	NCBP3	95	93.012	Cercocebus_atys
MGP_CAROLIEiJ_G0016684	Ncbp3	98	94.010	ENSCLAG00000012229	NCBP3	98	94.010	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016684	Ncbp3	98	89.934	ENSCSAG00000013543	NCBP3	98	89.439	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	89.701	ENSCHOG00000012323	NCBP3	98	89.369	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016684	Ncbp3	100	78.803	ENSCPBG00000014824	NCBP3	97	80.917	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016684	Ncbp3	98	85.124	ENSCANG00000033561	NCBP3	98	85.289	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	97.240	ENSCGRG00001018538	Ncbp3	100	97.240	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016684	Ncbp3	90	97.473	ENSCGRG00000015075	Ncbp3	100	97.473	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016684	Ncbp3	99	57.524	ENSCSEG00000006375	ncbp3	98	56.646	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016684	Ncbp3	99	48.980	ENSCVAG00000020563	ncbp3	98	52.410	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.693	ENSDARG00000044597	ncbp3	98	54.294	Danio_rerio
MGP_CAROLIEiJ_G0016684	Ncbp3	97	91.806	ENSDNOG00000006490	NCBP3	95	91.806	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	92.208	ENSDORG00000010141	Ncbp3	98	92.027	Dipodomys_ordii
MGP_CAROLIEiJ_G0016684	Ncbp3	97	93.300	ENSEASG00005013399	NCBP3	95	93.300	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	93.467	ENSECAG00000008444	NCBP3	95	93.467	Equus_caballus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	73.833	ENSEEUG00000008573	NCBP3	96	72.572	Erinaceus_europaeus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	53.934	ENSELUG00000009182	ncbp3	98	54.717	Esox_lucius
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.012	ENSFCAG00000007929	NCBP3	98	93.012	Felis_catus
MGP_CAROLIEiJ_G0016684	Ncbp3	92	81.834	ENSFALG00000006704	NCBP3	98	81.593	Ficedula_albicollis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	95.008	ENSFDAG00000013355	NCBP3	98	95.008	Fukomys_damarensis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	50.832	ENSFHEG00000005607	ncbp3	98	50.685	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016684	Ncbp3	73	59.344	ENSGMOG00000001007	ncbp3	77	59.211	Gadus_morhua
MGP_CAROLIEiJ_G0016684	Ncbp3	100	77.832	ENSGALG00000002653	NCBP3	98	79.016	Gallus_gallus
MGP_CAROLIEiJ_G0016684	Ncbp3	83	56.030	ENSGAFG00000008912	ncbp3	81	57.301	Gambusia_affinis
MGP_CAROLIEiJ_G0016684	Ncbp3	99	54.560	ENSGACG00000020902	ncbp3	97	53.943	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	79.935	ENSGAGG00000014490	NCBP3	98	78.852	Gopherus_agassizii
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.719	ENSGGOG00000007496	NCBP3	98	93.554	Gorilla_gorilla
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.844	ENSHGLG00000015839	NCBP3	98	93.844	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.844	ENSHGLG00100007256	NCBP3	98	93.844	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016684	Ncbp3	99	52.570	ENSHCOG00000004161	ncbp3	98	53.003	Hippocampus_comes
MGP_CAROLIEiJ_G0016684	Ncbp3	98	58.132	ENSIPUG00000024397	ncbp3	98	59.776	Ictalurus_punctatus
MGP_CAROLIEiJ_G0016684	Ncbp3	74	96.035	ENSSTOG00000002101	NCBP3	100	96.035	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	83.914	ENSJJAG00000000634	Ncbp3	98	83.748	Jaculus_jaculus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	53.139	ENSKMAG00000001932	ncbp3	98	53.971	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.212	ENSLBEG00000001558	-	98	51.679	Labrus_bergylta
MGP_CAROLIEiJ_G0016684	Ncbp3	98	51.823	ENSLBEG00000006036	ncbp3	98	52.351	Labrus_bergylta
MGP_CAROLIEiJ_G0016684	Ncbp3	98	62.562	ENSLACG00000018791	NCBP3	98	60.720	Latimeria_chalumnae
MGP_CAROLIEiJ_G0016684	Ncbp3	98	61.621	ENSLOCG00000006706	ncbp3	98	62.191	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	92.715	ENSLAFG00000002067	NCBP3	98	92.715	Loxodonta_africana
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.532	ENSMFAG00000024176	NCBP3	98	94.030	Macaca_fascicularis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.532	ENSMMUG00000008556	NCBP3	98	94.030	Macaca_mulatta
MGP_CAROLIEiJ_G0016684	Ncbp3	97	92.988	ENSMNEG00000041374	NCBP3	95	93.489	Macaca_nemestrina
MGP_CAROLIEiJ_G0016684	Ncbp3	88	93.934	ENSMLEG00000034703	NCBP3	97	93.934	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	53.134	ENSMAMG00000022461	ncbp3	98	53.690	Mastacembelus_armatus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	57.480	ENSMZEG00005027802	ncbp3	98	57.074	Maylandia_zebra
MGP_CAROLIEiJ_G0016684	Ncbp3	94	79.518	ENSMGAG00000004685	NCBP3	98	81.305	Meleagris_gallopavo
MGP_CAROLIEiJ_G0016684	Ncbp3	98	87.603	ENSMICG00000015798	NCBP3	98	87.603	Microcebus_murinus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	96.926	ENSMOCG00000016446	Ncbp3	100	96.926	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016684	Ncbp3	98	54.747	ENSMMOG00000012577	ncbp3	98	55.292	Mola_mola
MGP_CAROLIEiJ_G0016684	Ncbp3	98	53.752	ENSMALG00000009173	ncbp3	98	54.784	Monopterus_albus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	99.675	ENSMUSG00000020783	Ncbp3	100	99.675	Mus_musculus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	98.862	MGP_PahariEiJ_G0017817	Ncbp3	100	98.862	Mus_pahari
MGP_CAROLIEiJ_G0016684	Ncbp3	100	99.675	MGP_SPRETEiJ_G0017521	Ncbp3	100	99.675	Mus_spretus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	92.295	ENSMPUG00000012357	NCBP3	95	92.295	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016684	Ncbp3	98	91.514	ENSMLUG00000017060	NCBP3	98	90.849	Myotis_lucifugus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	95.840	ENSNGAG00000020321	Ncbp3	98	95.840	Nannospalax_galili
MGP_CAROLIEiJ_G0016684	Ncbp3	99	42.357	ENSNBRG00000017354	ncbp3	96	55.882	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016684	Ncbp3	98	87.914	ENSNLEG00000017279	NCBP3	98	88.079	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016684	Ncbp3	67	81.967	ENSMEUG00000015701	-	76	81.967	Notamacropus_eugenii
MGP_CAROLIEiJ_G0016684	Ncbp3	98	90.349	ENSOPRG00000016925	NCBP3	98	89.850	Ochotona_princeps
MGP_CAROLIEiJ_G0016684	Ncbp3	98	95.341	ENSODEG00000016617	NCBP3	98	95.341	Octodon_degus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	52.865	ENSONIG00000007434	ncbp3	98	53.947	Oreochromis_niloticus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	78.045	ENSOANG00000010109	NCBP3	98	77.541	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	92.462	ENSOCUG00000008045	NCBP3	95	92.462	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	54.338	ENSORLG00000013703	ncbp3	98	55.199	Oryzias_latipes
MGP_CAROLIEiJ_G0016684	Ncbp3	98	53.502	ENSORLG00020011764	ncbp3	98	55.115	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016684	Ncbp3	98	53.423	ENSORLG00015018733	ncbp3	98	54.726	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016684	Ncbp3	98	54.683	ENSOMEG00000017858	ncbp3	98	56.269	Oryzias_melastigma
MGP_CAROLIEiJ_G0016684	Ncbp3	98	92.409	ENSOGAG00000008803	NCBP3	98	92.409	Otolemur_garnettii
MGP_CAROLIEiJ_G0016684	Ncbp3	81	92.016	ENSOARG00000017750	NCBP3	97	92.402	Ovis_aries
MGP_CAROLIEiJ_G0016684	Ncbp3	98	94.059	ENSPPAG00000030530	NCBP3	98	94.059	Pan_paniscus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	92.359	ENSPPRG00000022474	NCBP3	98	92.359	Panthera_pardus
MGP_CAROLIEiJ_G0016684	Ncbp3	90	91.304	ENSPTIG00000009607	NCBP3	90	91.304	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.740	ENSPTRG00000008578	NCBP3	98	93.740	Pan_troglodytes
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.554	ENSPANG00000024364	NCBP3	98	93.554	Papio_anubis
MGP_CAROLIEiJ_G0016684	Ncbp3	90	59.682	ENSPKIG00000008466	ncbp3	87	60.636	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016684	Ncbp3	81	76.571	ENSPSIG00000013732	NCBP3	96	76.134	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016684	Ncbp3	99	51.502	ENSPMGG00000003344	ncbp3	98	52.550	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	96.916	ENSPEMG00000007746	Ncbp3	100	96.916	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016684	Ncbp3	100	78.515	ENSPCIG00000008605	NCBP3	98	78.491	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016684	Ncbp3	88	53.311	ENSPFOG00000000721	ncbp3	96	53.731	Poecilia_formosa
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.932	ENSPLAG00000015399	ncbp3	98	54.204	Poecilia_latipinna
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.553	ENSPMEG00000000896	ncbp3	98	53.973	Poecilia_mexicana
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.560	ENSPREG00000001681	ncbp3	98	54.135	Poecilia_reticulata
MGP_CAROLIEiJ_G0016684	Ncbp3	97	93.189	ENSPPYG00000007823	NCBP3	95	93.023	Pongo_abelii
MGP_CAROLIEiJ_G0016684	Ncbp3	100	88.130	ENSPCAG00000012614	NCBP3	98	88.353	Procavia_capensis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.223	ENSPCOG00000016793	NCBP3	98	93.223	Propithecus_coquereli
MGP_CAROLIEiJ_G0016684	Ncbp3	96	86.172	ENSPVAG00000012746	NCBP3	98	86.172	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	53.555	ENSPNYG00000022677	ncbp3	98	53.704	Pundamilia_nyererei
MGP_CAROLIEiJ_G0016684	Ncbp3	98	56.112	ENSPNAG00000003219	ncbp3	98	57.522	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016684	Ncbp3	100	97.561	ENSRNOG00000018550	Ncbp3	100	97.561	Rattus_norvegicus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.388	ENSRBIG00000033247	NCBP3	98	93.388	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.388	ENSRROG00000043833	NCBP3	99	92.988	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.046	ENSSBOG00000023178	NCBP3	98	93.212	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016684	Ncbp3	81	77.273	ENSSHAG00000003466	NCBP3	97	75.203	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016684	Ncbp3	100	57.670	ENSSFOG00015005808	ncbp3	98	57.466	Scleropages_formosus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	50.649	ENSSMAG00000010917	ncbp3	98	51.227	Scophthalmus_maximus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	58.502	ENSSDUG00000023402	ncbp3	98	58.400	Seriola_dumerili
MGP_CAROLIEiJ_G0016684	Ncbp3	99	46.293	ENSSLDG00000000742	ncbp3	98	46.769	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	83.250	ENSSARG00000006634	NCBP3	98	83.748	Sorex_araneus
MGP_CAROLIEiJ_G0016684	Ncbp3	100	75.994	ENSSPUG00000002240	NCBP3	98	74.472	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016684	Ncbp3	99	52.758	ENSSPAG00000011223	ncbp3	98	54.454	Stegastes_partitus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	93.178	ENSSSCG00000017870	NCBP3	98	93.178	Sus_scrofa
MGP_CAROLIEiJ_G0016684	Ncbp3	98	79.538	ENSTGUG00000005396	NCBP3	98	80.795	Taeniopygia_guttata
MGP_CAROLIEiJ_G0016684	Ncbp3	99	54.688	ENSTRUG00000003769	ncbp3	98	55.696	Takifugu_rubripes
MGP_CAROLIEiJ_G0016684	Ncbp3	99	55.385	ENSTNIG00000004776	ncbp3	98	56.044	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016684	Ncbp3	98	88.391	ENSTBEG00000006308	NCBP3	98	87.894	Tupaia_belangeri
MGP_CAROLIEiJ_G0016684	Ncbp3	98	86.356	ENSTTRG00000005845	NCBP3	98	86.356	Tursiops_truncatus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	89.141	ENSUAMG00000014043	NCBP3	98	89.141	Ursus_americanus
MGP_CAROLIEiJ_G0016684	Ncbp3	88	91.481	ENSUMAG00000007519	NCBP3	96	91.852	Ursus_maritimus
MGP_CAROLIEiJ_G0016684	Ncbp3	97	88.127	ENSVVUG00000026079	NCBP3	95	88.127	Vulpes_vulpes
MGP_CAROLIEiJ_G0016684	Ncbp3	100	61.551	ENSXETG00000012965	ncbp3	98	62.460	Xenopus_tropicalis
MGP_CAROLIEiJ_G0016684	Ncbp3	99	50.912	ENSXCOG00000018393	ncbp3	99	51.223	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016684	Ncbp3	98	52.102	ENSXMAG00000006849	ncbp3	98	53.073	Xiphophorus_maculatus