EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016828 (Gene tree)
Gene ID: 110304612
Gene Symbol: Utp6
Alias: 4732497O03Rik|HCA66
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 29486 bases
Position: chr11:74881526-74911011
Accession: 110304612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0028657	U3_assoc_6	PF08640.11	3.3e-25	1	1
MGP_CAROLIEiJ_P0028658	U3_assoc_6	PF08640.11	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0028659	-	648	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028658	-	3223	XM_021176030	MGP_CAROLIEiJ_P0028658	597 (aa)	XP_021031689	UPI000A31A6B0
MGP_CAROLIEiJ_T0028660	-	559	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028657	-	2308	-	MGP_CAROLIEiJ_P0028657	597 (aa)	-	UPI000A31A6B0

Gene Model

Click here to download MGP_CAROLIEiJ_G0016828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSG00000108651	UTP6	99	85.762	Homo_sapiens
MGP_CAROLIEiJ_G0016828	Utp6	100	55.109	ENSAPOG00000000435	utp6	99	55.109	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016828	Utp6	99	85.738	ENSAMEG00000005443	UTP6	99	85.738	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016828	Utp6	100	53.936	ENSACIG00000004124	utp6	99	53.936	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.774	ENSAOCG00000016812	utp6	99	54.774	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016828	Utp6	100	54.439	ENSAPEG00000023565	utp6	99	54.439	Amphiprion_percula
MGP_CAROLIEiJ_G0016828	Utp6	100	55.611	ENSATEG00000003401	utp6	99	55.611	Anabas_testudineus
MGP_CAROLIEiJ_G0016828	Utp6	99	65.025	ENSAPLG00000005821	UTP6	98	65.025	Anas_platyrhynchos
MGP_CAROLIEiJ_G0016828	Utp6	100	64.657	ENSACAG00000009472	UTP6	99	64.657	Anolis_carolinensis
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSANAG00000034603	UTP6	99	85.972	Aotus_nancymaae
MGP_CAROLIEiJ_G0016828	Utp6	100	56.784	ENSACLG00000006728	utp6	99	56.784	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016828	Utp6	100	56.449	ENSAMXG00000009478	utp6	99	56.449	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016828	Utp6	99	74.664	ENSBTAG00000015612	UTP6	99	74.664	Bos_taurus
MGP_CAROLIEiJ_G0016828	Utp6	99	72.987	ENSBTAG00000003769	-	98	72.987	Bos_taurus
MGP_CAROLIEiJ_G0016828	Utp6	100	86.265	ENSCJAG00000014115	UTP6	99	86.265	Callithrix_jacchus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSCAFG00000018507	UTP6	99	85.930	Canis_familiaris
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSCAFG00020014678	UTP6	99	85.930	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016828	Utp6	99	74.664	ENSCHIG00000009726	-	99	74.664	Capra_hircus
MGP_CAROLIEiJ_G0016828	Utp6	99	74.832	ENSCHIG00000017954	-	99	74.832	Capra_hircus
MGP_CAROLIEiJ_G0016828	Utp6	100	76.549	ENSTSYG00000002202	UTP6	99	76.549	Carlito_syrichta
MGP_CAROLIEiJ_G0016828	Utp6	92	74.141	ENSCAPG00000017595	UTP6	99	74.141	Cavia_aperea
MGP_CAROLIEiJ_G0016828	Utp6	100	88.275	ENSCPOG00000014294	UTP6	100	88.275	Cavia_porcellus
MGP_CAROLIEiJ_G0016828	Utp6	100	79.564	ENSCCAG00000033318	-	99	79.564	Cebus_capucinus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSCATG00000034868	UTP6	99	85.762	Cercocebus_atys
MGP_CAROLIEiJ_G0016828	Utp6	100	89.280	ENSCLAG00000007274	UTP6	99	89.280	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016828	Utp6	100	85.260	ENSCSAG00000006595	UTP6	99	85.260	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016828	Utp6	88	65.217	ENSCHOG00000010940	-	88	65.217	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016828	Utp6	100	68.509	ENSCPBG00000004652	UTP6	99	68.509	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016828	Utp6	99	31.877	ENSCING00000022947	-	99	31.877	Ciona_intestinalis
MGP_CAROLIEiJ_G0016828	Utp6	53	38.390	ENSCSAVG00000011416	-	98	38.390	Ciona_savignyi
MGP_CAROLIEiJ_G0016828	Utp6	87	64.122	ENSCANG00000031141	UTP6	89	64.122	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016828	Utp6	100	93.970	ENSCGRG00001000046	Utp6	100	93.970	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016828	Utp6	95	94.170	ENSCGRG00000011543	Utp6	100	94.170	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016828	Utp6	100	51.987	ENSCSEG00000013422	utp6	99	67.213	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016828	Utp6	100	54.941	ENSCVAG00000020322	utp6	99	54.941	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.104	ENSDARG00000098433	utp6	100	64.641	Danio_rerio
MGP_CAROLIEiJ_G0016828	Utp6	100	87.437	ENSDNOG00000037018	UTP6	99	87.437	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016828	Utp6	91	87.179	ENSDORG00000003843	Utp6	100	87.179	Dipodomys_ordii
MGP_CAROLIEiJ_G0016828	Utp6	100	87.437	ENSEASG00005010870	UTP6	99	87.437	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016828	Utp6	100	87.102	ENSECAG00000022217	UTP6	99	87.102	Equus_caballus
MGP_CAROLIEiJ_G0016828	Utp6	100	55.611	ENSELUG00000006618	utp6	99	55.611	Esox_lucius
MGP_CAROLIEiJ_G0016828	Utp6	100	83.779	ENSFCAG00000015795	UTP6	99	83.779	Felis_catus
MGP_CAROLIEiJ_G0016828	Utp6	100	66.499	ENSFALG00000002282	UTP6	99	66.499	Ficedula_albicollis
MGP_CAROLIEiJ_G0016828	Utp6	100	88.107	ENSFDAG00000019506	UTP6	100	88.107	Fukomys_damarensis
MGP_CAROLIEiJ_G0016828	Utp6	100	54.849	ENSFHEG00000010373	utp6	99	54.849	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.439	ENSGMOG00000011958	utp6	99	54.439	Gadus_morhua
MGP_CAROLIEiJ_G0016828	Utp6	100	65.997	ENSGALG00000003260	UTP6	99	65.997	Gallus_gallus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.849	ENSGAFG00000008505	utp6	99	54.849	Gambusia_affinis
MGP_CAROLIEiJ_G0016828	Utp6	100	55.611	ENSGACG00000019424	utp6	99	55.611	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016828	Utp6	100	67.504	ENSGAGG00000004820	UTP6	99	67.504	Gopherus_agassizii
MGP_CAROLIEiJ_G0016828	Utp6	99	68.960	ENSGGOG00000026003	-	99	68.960	Gorilla_gorilla
MGP_CAROLIEiJ_G0016828	Utp6	100	85.595	ENSGGOG00000013569	UTP6	99	85.595	Gorilla_gorilla
MGP_CAROLIEiJ_G0016828	Utp6	100	56.784	ENSHBUG00000018668	utp6	99	56.784	Haplochromis_burtoni
MGP_CAROLIEiJ_G0016828	Utp6	99	81.650	ENSHGLG00000008642	-	99	81.650	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016828	Utp6	100	87.940	ENSHGLG00000010332	UTP6	100	87.940	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016828	Utp6	100	84.925	ENSHGLG00100014271	-	100	84.925	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016828	Utp6	95	82.601	ENSHGLG00100006047	-	99	82.601	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016828	Utp6	100	54.439	ENSHCOG00000017277	utp6	99	54.439	Hippocampus_comes
MGP_CAROLIEiJ_G0016828	Utp6	100	55.779	ENSIPUG00000022587	Utp6	99	55.779	Ictalurus_punctatus
MGP_CAROLIEiJ_G0016828	Utp6	100	87.605	ENSSTOG00000015875	UTP6	100	87.605	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016828	Utp6	100	55.444	ENSKMAG00000021631	utp6	99	55.444	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016828	Utp6	100	56.449	ENSLBEG00000002115	utp6	99	56.449	Labrus_bergylta
MGP_CAROLIEiJ_G0016828	Utp6	100	65.829	ENSLACG00000017158	UTP6	99	65.829	Latimeria_chalumnae
MGP_CAROLIEiJ_G0016828	Utp6	91	60.000	ENSLOCG00000013797	utp6	90	60.000	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.260	ENSLAFG00000013008	UTP6	99	85.260	Loxodonta_africana
MGP_CAROLIEiJ_G0016828	Utp6	99	60.702	ENSMFAG00000041904	-	99	60.702	Macaca_fascicularis
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSMFAG00000038842	UTP6	99	85.762	Macaca_fascicularis
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSMMUG00000020403	UTP6	99	85.762	Macaca_mulatta
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSMNEG00000039480	UTP6	99	85.762	Macaca_nemestrina
MGP_CAROLIEiJ_G0016828	Utp6	100	71.452	ENSMLEG00000032174	UTP6	99	71.452	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016828	Utp6	99	67.677	ENSMLEG00000039364	-	99	67.677	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.849	ENSMAMG00000002228	utp6	99	54.849	Mastacembelus_armatus
MGP_CAROLIEiJ_G0016828	Utp6	100	56.784	ENSMZEG00005023895	utp6	99	56.784	Maylandia_zebra
MGP_CAROLIEiJ_G0016828	Utp6	95	66.197	ENSMGAG00000008111	UTP6	99	66.197	Meleagris_gallopavo
MGP_CAROLIEiJ_G0016828	Utp6	100	94.305	ENSMAUG00000021895	Utp6	100	94.305	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016828	Utp6	100	80.905	ENSMICG00000002632	UTP6	99	80.905	Microcebus_murinus
MGP_CAROLIEiJ_G0016828	Utp6	100	93.300	ENSMOCG00000014163	Utp6	100	93.300	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016828	Utp6	100	54.181	ENSMMOG00000008653	utp6	99	66.102	Mola_mola
MGP_CAROLIEiJ_G0016828	Utp6	99	68.289	ENSMODG00000019206	UTP6	99	68.174	Monodelphis_domestica
MGP_CAROLIEiJ_G0016828	Utp6	100	55.351	ENSMALG00000021112	utp6	99	55.351	Monopterus_albus
MGP_CAROLIEiJ_G0016828	Utp6	100	99.330	ENSMUSG00000035575	Utp6	100	99.330	Mus_musculus
MGP_CAROLIEiJ_G0016828	Utp6	100	80.435	MGP_PahariEiJ_G0017965	Utp6	100	80.435	Mus_pahari
MGP_CAROLIEiJ_G0016828	Utp6	100	98.827	MGP_SPRETEiJ_G0017672	Utp6	100	98.827	Mus_spretus
MGP_CAROLIEiJ_G0016828	Utp6	100	83.920	ENSMPUG00000014581	UTP6	99	83.920	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016828	Utp6	100	86.600	ENSMLUG00000016422	UTP6	99	86.600	Myotis_lucifugus
MGP_CAROLIEiJ_G0016828	Utp6	100	89.950	ENSNGAG00000015482	Utp6	100	89.950	Nannospalax_galili
MGP_CAROLIEiJ_G0016828	Utp6	100	56.449	ENSNBRG00000019714	utp6	99	56.449	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016828	Utp6	100	84.757	ENSNLEG00000011009	UTP6	99	84.757	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016828	Utp6	89	71.631	ENSOPRG00000008446	-	89	71.631	Ochotona_princeps
MGP_CAROLIEiJ_G0016828	Utp6	66	85.654	ENSODEG00000011971	UTP6	100	85.654	Octodon_degus
MGP_CAROLIEiJ_G0016828	Utp6	100	56.616	ENSONIG00000018090	utp6	99	56.616	Oreochromis_niloticus
MGP_CAROLIEiJ_G0016828	Utp6	98	66.327	ENSOANG00000004279	UTP6	99	66.327	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016828	Utp6	100	84.087	ENSOCUG00000016980	UTP6	99	84.087	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016828	Utp6	100	56.355	ENSORLG00000003546	utp6	64	56.355	Oryzias_latipes
MGP_CAROLIEiJ_G0016828	Utp6	100	56.355	ENSORLG00020010377	utp6	99	56.355	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016828	Utp6	100	55.686	ENSORLG00015008893	utp6	99	55.686	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016828	Utp6	100	56.020	ENSOMEG00000017487	utp6	99	56.020	Oryzias_melastigma
MGP_CAROLIEiJ_G0016828	Utp6	87	76.381	ENSOGAG00000004511	UTP6	100	76.381	Otolemur_garnettii
MGP_CAROLIEiJ_G0016828	Utp6	99	74.664	ENSOARG00000013474	UTP6	99	74.664	Ovis_aries
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSPPAG00000038089	UTP6	99	85.930	Pan_paniscus
MGP_CAROLIEiJ_G0016828	Utp6	99	69.631	ENSPPAG00000016895	-	99	69.631	Pan_paniscus
MGP_CAROLIEiJ_G0016828	Utp6	100	87.270	ENSPPRG00000001010	UTP6	99	87.270	Panthera_pardus
MGP_CAROLIEiJ_G0016828	Utp6	100	87.270	ENSPTIG00000013913	UTP6	99	87.270	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016828	Utp6	99	69.463	ENSPTRG00000044798	-	99	69.463	Pan_troglodytes
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSPTRG00000008977	UTP6	99	85.930	Pan_troglodytes
MGP_CAROLIEiJ_G0016828	Utp6	99	67.622	ENSPANG00000034274	-	99	67.622	Papio_anubis
MGP_CAROLIEiJ_G0016828	Utp6	100	82.943	ENSPANG00000023113	UTP6	99	82.943	Papio_anubis
MGP_CAROLIEiJ_G0016828	Utp6	100	55.017	ENSPKIG00000004653	utp6	99	55.017	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016828	Utp6	100	67.504	ENSPSIG00000012435	UTP6	99	67.504	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016828	Utp6	100	55.184	ENSPMGG00000009548	utp6	99	55.184	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016828	Utp6	100	94.137	ENSPEMG00000014081	Utp6	100	94.137	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016828	Utp6	93	45.648	ENSPMAG00000009561	utp6	99	45.648	Petromyzon_marinus
MGP_CAROLIEiJ_G0016828	Utp6	100	69.514	ENSPCIG00000029968	UTP6	86	69.514	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.682	ENSPFOG00000013918	utp6	99	54.682	Poecilia_formosa
MGP_CAROLIEiJ_G0016828	Utp6	100	55.017	ENSPLAG00000017825	utp6	99	55.017	Poecilia_latipinna
MGP_CAROLIEiJ_G0016828	Utp6	100	54.682	ENSPMEG00000008133	utp6	99	54.682	Poecilia_mexicana
MGP_CAROLIEiJ_G0016828	Utp6	100	54.104	ENSPREG00000013108	utp6	99	54.104	Poecilia_reticulata
MGP_CAROLIEiJ_G0016828	Utp6	100	82.245	ENSPPYG00000008154	UTP6	99	82.245	Pongo_abelii
MGP_CAROLIEiJ_G0016828	Utp6	63	60.638	ENSPCAG00000014878	-	69	60.638	Procavia_capensis
MGP_CAROLIEiJ_G0016828	Utp6	100	80.402	ENSPCOG00000010224	UTP6	99	80.402	Propithecus_coquereli
MGP_CAROLIEiJ_G0016828	Utp6	100	82.580	ENSPVAG00000015759	UTP6	99	82.580	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016828	Utp6	100	56.449	ENSPNYG00000002290	utp6	99	56.449	Pundamilia_nyererei
MGP_CAROLIEiJ_G0016828	Utp6	100	53.434	ENSPNAG00000027370	utp6	99	53.434	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016828	Utp6	100	92.797	ENSRNOG00000014209	Utp6	100	92.797	Rattus_norvegicus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.092	ENSRBIG00000020822	UTP6	99	85.092	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016828	Utp6	100	85.092	ENSRROG00000036838	UTP6	99	85.092	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016828	Utp6	100	55.760	ENSSFOG00015005978	utp6	99	55.760	Scleropages_formosus
MGP_CAROLIEiJ_G0016828	Utp6	100	55.276	ENSSMAG00000014772	utp6	99	55.276	Scophthalmus_maximus
MGP_CAROLIEiJ_G0016828	Utp6	100	55.779	ENSSDUG00000000329	utp6	99	55.779	Seriola_dumerili
MGP_CAROLIEiJ_G0016828	Utp6	100	55.611	ENSSLDG00000016724	utp6	99	55.611	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016828	Utp6	99	75.168	ENSSARG00000010778	UTP6	99	75.168	Sorex_araneus
MGP_CAROLIEiJ_G0016828	Utp6	100	67.169	ENSSPUG00000005273	UTP6	99	67.169	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016828	Utp6	100	53.434	ENSSPAG00000011871	utp6	99	53.434	Stegastes_partitus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.930	ENSSSCG00000017745	UTP6	99	88.199	Sus_scrofa
MGP_CAROLIEiJ_G0016828	Utp6	100	66.388	ENSTGUG00000004999	UTP6	99	66.388	Taeniopygia_guttata
MGP_CAROLIEiJ_G0016828	Utp6	100	54.774	ENSTRUG00000012005	utp6	100	54.774	Takifugu_rubripes
MGP_CAROLIEiJ_G0016828	Utp6	100	55.109	ENSTNIG00000003235	utp6	100	55.109	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016828	Utp6	67	76.243	ENSTBEG00000005388	-	67	76.243	Tupaia_belangeri
MGP_CAROLIEiJ_G0016828	Utp6	100	85.427	ENSTTRG00000009911	UTP6	99	85.427	Tursiops_truncatus
MGP_CAROLIEiJ_G0016828	Utp6	99	86.242	ENSUMAG00000015139	UTP6	99	86.242	Ursus_maritimus
MGP_CAROLIEiJ_G0016828	Utp6	100	85.762	ENSVPAG00000005782	UTP6	99	85.762	Vicugna_pacos
MGP_CAROLIEiJ_G0016828	Utp6	100	86.097	ENSVVUG00000012238	UTP6	99	86.097	Vulpes_vulpes
MGP_CAROLIEiJ_G0016828	Utp6	99	51.174	ENSXETG00000020057	utp6	99	51.174	Xenopus_tropicalis
MGP_CAROLIEiJ_G0016828	Utp6	100	54.333	ENSXCOG00000013626	utp6	99	54.333	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016828	Utp6	100	54.348	ENSXMAG00000017414	utp6	99	54.348	Xiphophorus_maculatus