EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016896 (Gene tree)
Gene ID: 110305207
Gene Symbol: Mrm1
Alias: A530065E19Rik
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 6841 bases
Position: chr11:80059173-80066013
Accession: 110305207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0028893	SpoU_sub_bind	PF08032.12	5.8e-15	1	1
MGP_CAROLIEiJ_P0028893	SpoU_methylase	PF00588.19	2.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0028895	-	173	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028894	-	546	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0028893	-	2504	XM_021177043	MGP_CAROLIEiJ_P0028893	320 (aa)	XP_021032702	UPI000A316EFB

Gene Model

Click here to download MGP_CAROLIEiJ_G0016896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.672	ENSG00000278619	MRM1	88	81.672	Homo_sapiens
MGP_CAROLIEiJ_G0016896	Mrm1	93	44.828	ENSAPOG00000016309	mrm1	79	44.828	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016896	Mrm1	98	81.505	ENSAMEG00000008301	MRM1	89	81.505	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016896	Mrm1	84	49.135	ENSACIG00000012244	mrm1	72	49.135	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016896	Mrm1	88	48.043	ENSAOCG00000000362	mrm1	69	48.043	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016896	Mrm1	88	47.687	ENSAPEG00000004511	mrm1	69	47.687	Amphiprion_percula
MGP_CAROLIEiJ_G0016896	Mrm1	87	53.684	ENSAPLG00000006433	MRM1	90	53.684	Anas_platyrhynchos
MGP_CAROLIEiJ_G0016896	Mrm1	93	50.814	ENSACAG00000002573	MRM1	92	50.814	Anolis_carolinensis
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.731	ENSANAG00000025500	MRM1	89	81.731	Aotus_nancymaae
MGP_CAROLIEiJ_G0016896	Mrm1	80	51.163	ENSACLG00000023745	mrm1	87	51.311	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016896	Mrm1	88	42.612	ENSAMXG00000030596	mrm1	70	42.612	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016896	Mrm1	88	42.612	ENSAMXG00000007295	mrm1	70	42.612	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016896	Mrm1	98	77.429	ENSBTAG00000010311	MRM1	89	77.429	Bos_taurus
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.350	ENSCJAG00000001023	MRM1	89	81.350	Callithrix_jacchus
MGP_CAROLIEiJ_G0016896	Mrm1	97	78.481	ENSCAFG00000017849	MRM1	89	78.481	Canis_familiaris
MGP_CAROLIEiJ_G0016896	Mrm1	97	78.481	ENSCAFG00020002377	MRM1	89	78.481	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016896	Mrm1	98	78.370	ENSCHIG00000008558	MRM1	89	78.370	Capra_hircus
MGP_CAROLIEiJ_G0016896	Mrm1	97	84.615	ENSTSYG00000036380	MRM1	88	84.615	Carlito_syrichta
MGP_CAROLIEiJ_G0016896	Mrm1	98	81.270	ENSCPOG00000004283	MRM1	89	81.270	Cavia_porcellus
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.672	ENSCCAG00000020032	MRM1	89	81.672	Cebus_capucinus
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.923	ENSCATG00000041516	MRM1	88	83.923	Cercocebus_atys
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.731	ENSCLAG00000010960	MRM1	87	81.731	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016896	Mrm1	97	84.244	ENSCSAG00000006055	MRM1	88	84.244	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016896	Mrm1	83	48.921	ENSCPBG00000009581	MRM1	59	48.921	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.923	ENSCANG00000025543	MRM1	88	83.923	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016896	Mrm1	100	90.062	ENSCGRG00001001937	Mrm1	100	90.062	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016896	Mrm1	100	90.062	ENSCGRG00000009593	Mrm1	100	90.062	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016896	Mrm1	89	44.262	ENSCSEG00000014575	mrm1	78	44.781	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016896	Mrm1	84	46.996	ENSCVAG00000012104	mrm1	72	46.996	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016896	Mrm1	62	52.764	ENSDARG00000059658	mrm1	98	52.764	Danio_rerio
MGP_CAROLIEiJ_G0016896	Mrm1	99	66.465	ENSDNOG00000035159	MRM1	92	66.465	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016896	Mrm1	72	81.116	ENSDORG00000013267	Mrm1	99	81.116	Dipodomys_ordii
MGP_CAROLIEiJ_G0016896	Mrm1	77	76.285	ENSETEG00000000378	MRM1	95	76.285	Echinops_telfairi
MGP_CAROLIEiJ_G0016896	Mrm1	99	80.247	ENSEASG00005002123	MRM1	91	80.247	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016896	Mrm1	99	80.247	ENSECAG00000025139	MRM1	91	80.247	Equus_caballus
MGP_CAROLIEiJ_G0016896	Mrm1	63	77.404	ENSEEUG00000013434	-	93	77.404	Erinaceus_europaeus
MGP_CAROLIEiJ_G0016896	Mrm1	85	46.763	ENSELUG00000012392	mrm1	62	46.763	Esox_lucius
MGP_CAROLIEiJ_G0016896	Mrm1	99	77.914	ENSFCAG00000031667	MRM1	91	77.914	Felis_catus
MGP_CAROLIEiJ_G0016896	Mrm1	50	62.733	ENSFALG00000005294	MRM1	98	62.733	Ficedula_albicollis
MGP_CAROLIEiJ_G0016896	Mrm1	99	72.013	ENSFDAG00000018545	MRM1	98	72.013	Fukomys_damarensis
MGP_CAROLIEiJ_G0016896	Mrm1	83	45.788	ENSFHEG00000005529	mrm1	75	46.403	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016896	Mrm1	78	56.349	ENSGALG00000039523	MRM1	88	59.292	Gallus_gallus
MGP_CAROLIEiJ_G0016896	Mrm1	88	46.758	ENSGAFG00000012959	mrm1	79	46.758	Gambusia_affinis
MGP_CAROLIEiJ_G0016896	Mrm1	81	49.612	ENSGACG00000004024	mrm1	96	49.612	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016896	Mrm1	86	52.595	ENSGAGG00000000908	MRM1	71	52.234	Gopherus_agassizii
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.672	ENSGGOG00000007979	MRM1	88	81.672	Gorilla_gorilla
MGP_CAROLIEiJ_G0016896	Mrm1	80	50.775	ENSHBUG00000004484	mrm1	87	50.936	Haplochromis_burtoni
MGP_CAROLIEiJ_G0016896	Mrm1	99	80.615	ENSHGLG00000008701	MRM1	93	80.615	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016896	Mrm1	99	71.077	ENSHGLG00100012646	MRM1	99	72.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016896	Mrm1	86	48.454	ENSHCOG00000003665	mrm1	81	47.973	Hippocampus_comes
MGP_CAROLIEiJ_G0016896	Mrm1	83	45.221	ENSIPUG00000022357	mrm1	76	41.914	Ictalurus_punctatus
MGP_CAROLIEiJ_G0016896	Mrm1	97	82.051	ENSSTOG00000002422	MRM1	93	82.051	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016896	Mrm1	91	78.425	ENSJJAG00000010068	Mrm1	99	77.551	Jaculus_jaculus
MGP_CAROLIEiJ_G0016896	Mrm1	81	50.376	ENSLBEG00000009581	mrm1	86	50.376	Labrus_bergylta
MGP_CAROLIEiJ_G0016896	Mrm1	88	43.554	ENSLACG00000017664	MRM1	96	43.554	Latimeria_chalumnae
MGP_CAROLIEiJ_G0016896	Mrm1	83	51.685	ENSLOCG00000004945	mrm1	84	51.685	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016896	Mrm1	92	81.879	ENSLAFG00000012584	MRM1	91	81.879	Loxodonta_africana
MGP_CAROLIEiJ_G0016896	Mrm1	97	84.566	ENSMFAG00000032112	MRM1	89	84.566	Macaca_fascicularis
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.923	ENSMMUG00000000622	MRM1	91	83.923	Macaca_mulatta
MGP_CAROLIEiJ_G0016896	Mrm1	97	84.244	ENSMNEG00000044557	MRM1	89	84.244	Macaca_nemestrina
MGP_CAROLIEiJ_G0016896	Mrm1	97	84.566	ENSMLEG00000031933	MRM1	88	84.566	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016896	Mrm1	85	45.051	ENSMAMG00000007018	mrm1	99	44.884	Mastacembelus_armatus
MGP_CAROLIEiJ_G0016896	Mrm1	80	51.163	ENSMZEG00005008320	mrm1	87	51.311	Maylandia_zebra
MGP_CAROLIEiJ_G0016896	Mrm1	100	88.474	ENSMAUG00000020976	Mrm1	100	88.474	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016896	Mrm1	95	82.178	ENSMICG00000004216	MRM1	91	82.178	Microcebus_murinus
MGP_CAROLIEiJ_G0016896	Mrm1	89	47.436	ENSMMOG00000001468	mrm1	91	46.965	Mola_mola
MGP_CAROLIEiJ_G0016896	Mrm1	90	68.729	ENSMODG00000003307	MRM1	68	68.729	Monodelphis_domestica
MGP_CAROLIEiJ_G0016896	Mrm1	86	49.281	ENSMALG00000014364	mrm1	88	48.772	Monopterus_albus
MGP_CAROLIEiJ_G0016896	Mrm1	100	99.062	ENSMUSG00000018405	Mrm1	100	99.062	Mus_musculus
MGP_CAROLIEiJ_G0016896	Mrm1	100	96.562	MGP_PahariEiJ_G0018026	Mrm1	100	96.562	Mus_pahari
MGP_CAROLIEiJ_G0016896	Mrm1	100	99.062	MGP_SPRETEiJ_G0017741	Mrm1	100	99.062	Mus_spretus
MGP_CAROLIEiJ_G0016896	Mrm1	99	77.508	ENSMPUG00000015063	MRM1	91	77.508	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016896	Mrm1	97	80.573	ENSMLUG00000013208	MRM1	88	80.573	Myotis_lucifugus
MGP_CAROLIEiJ_G0016896	Mrm1	97	85.897	ENSNGAG00000019175	Mrm1	95	85.897	Nannospalax_galili
MGP_CAROLIEiJ_G0016896	Mrm1	83	48.592	ENSNBRG00000023533	mrm1	87	50.936	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016896	Mrm1	97	82.958	ENSNLEG00000002300	MRM1	88	82.958	Nomascus_leucogenys
MGP_CAROLIEiJ_G0016896	Mrm1	95	77.705	ENSOPRG00000012866	MRM1	89	77.273	Ochotona_princeps
MGP_CAROLIEiJ_G0016896	Mrm1	96	52.885	ENSODEG00000013042	-	92	52.885	Octodon_degus
MGP_CAROLIEiJ_G0016896	Mrm1	83	49.296	ENSONIG00000021236	mrm1	89	51.685	Oreochromis_niloticus
MGP_CAROLIEiJ_G0016896	Mrm1	98	75.873	ENSOCUG00000012149	MRM1	88	75.873	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0016896	Mrm1	79	51.969	ENSORLG00000025876	mrm1	82	51.969	Oryzias_latipes
MGP_CAROLIEiJ_G0016896	Mrm1	79	52.157	ENSORLG00020021701	mrm1	81	52.157	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0016896	Mrm1	79	52.941	ENSORLG00015020702	mrm1	81	52.941	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016896	Mrm1	86	47.766	ENSOMEG00000003504	mrm1	93	47.766	Oryzias_melastigma
MGP_CAROLIEiJ_G0016896	Mrm1	95	83.498	ENSOGAG00000013785	MRM1	96	83.498	Otolemur_garnettii
MGP_CAROLIEiJ_G0016896	Mrm1	98	78.370	ENSOARG00000018616	MRM1	89	78.370	Ovis_aries
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.350	ENSPPAG00000043135	MRM1	88	81.350	Pan_paniscus
MGP_CAROLIEiJ_G0016896	Mrm1	99	77.607	ENSPPRG00000023620	MRM1	91	77.607	Panthera_pardus
MGP_CAROLIEiJ_G0016896	Mrm1	84	80.669	ENSPTIG00000009829	MRM1	94	80.669	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016896	Mrm1	97	81.994	ENSPTRG00000009049	MRM1	88	81.994	Pan_troglodytes
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.601	ENSPANG00000022126	MRM1	88	83.601	Papio_anubis
MGP_CAROLIEiJ_G0016896	Mrm1	84	50.000	ENSPKIG00000007654	mrm1	76	50.000	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016896	Mrm1	81	55.725	ENSPSIG00000017622	MRM1	91	55.725	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016896	Mrm1	90	44.409	ENSPMGG00000003905	mrm1	91	44.409	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016896	Mrm1	65	40.991	ENSPMAG00000000484	mrm1	81	43.094	Petromyzon_marinus
MGP_CAROLIEiJ_G0016896	Mrm1	88	67.730	ENSPCIG00000003352	MRM1	74	67.730	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016896	Mrm1	88	43.299	ENSPFOG00000018234	mrm1	71	43.299	Poecilia_formosa
MGP_CAROLIEiJ_G0016896	Mrm1	88	48.288	ENSPLAG00000020759	mrm1	73	48.288	Poecilia_latipinna
MGP_CAROLIEiJ_G0016896	Mrm1	88	48.797	ENSPMEG00000021744	mrm1	73	48.797	Poecilia_mexicana
MGP_CAROLIEiJ_G0016896	Mrm1	91	48.173	ENSPREG00000013224	mrm1	81	48.333	Poecilia_reticulata
MGP_CAROLIEiJ_G0016896	Mrm1	98	68.750	ENSPCAG00000011756	MRM1	89	68.750	Procavia_capensis
MGP_CAROLIEiJ_G0016896	Mrm1	93	84.281	ENSPCOG00000020871	MRM1	90	84.281	Propithecus_coquereli
MGP_CAROLIEiJ_G0016896	Mrm1	98	66.875	ENSPVAG00000011626	MRM1	89	66.875	Pteropus_vampyrus
MGP_CAROLIEiJ_G0016896	Mrm1	83	49.296	ENSPNYG00000000528	mrm1	96	49.488	Pundamilia_nyererei
MGP_CAROLIEiJ_G0016896	Mrm1	87	44.816	ENSPNAG00000014551	mrm1	73	44.816	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016896	Mrm1	100	93.125	ENSRNOG00000027901	Mrm1	100	93.125	Rattus_norvegicus
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.601	ENSRBIG00000040494	MRM1	88	83.601	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0016896	Mrm1	97	83.601	ENSRROG00000041704	MRM1	89	83.601	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0016896	Mrm1	97	82.958	ENSSBOG00000024145	MRM1	89	82.958	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016896	Mrm1	91	45.513	ENSSFOG00015022117	mrm1	77	45.513	Scleropages_formosus
MGP_CAROLIEiJ_G0016896	Mrm1	82	50.000	ENSSMAG00000009657	mrm1	85	50.000	Scophthalmus_maximus
MGP_CAROLIEiJ_G0016896	Mrm1	88	50.000	ENSSDUG00000009089	mrm1	69	50.000	Seriola_dumerili
MGP_CAROLIEiJ_G0016896	Mrm1	88	50.704	ENSSLDG00000024141	mrm1	78	50.704	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016896	Mrm1	53	74.227	ENSSARG00000009937	-	51	74.227	Sorex_araneus
MGP_CAROLIEiJ_G0016896	Mrm1	87	48.311	ENSSPUG00000000265	MRM1	75	48.311	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016896	Mrm1	91	81.695	ENSSSCG00000017691	MRM1	81	81.695	Sus_scrofa
MGP_CAROLIEiJ_G0016896	Mrm1	60	60.406	ENSTGUG00000008048	MRM1	98	60.406	Taeniopygia_guttata
MGP_CAROLIEiJ_G0016896	Mrm1	91	41.534	ENSTRUG00000011737	mrm1	81	41.534	Takifugu_rubripes
MGP_CAROLIEiJ_G0016896	Mrm1	81	47.170	ENSTNIG00000010088	mrm1	70	47.170	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016896	Mrm1	64	80.383	ENSTBEG00000007237	-	96	80.383	Tupaia_belangeri
MGP_CAROLIEiJ_G0016896	Mrm1	98	76.250	ENSTTRG00000011984	MRM1	89	76.250	Tursiops_truncatus
MGP_CAROLIEiJ_G0016896	Mrm1	97	79.938	ENSUAMG00000023152	MRM1	94	82.653	Ursus_americanus
MGP_CAROLIEiJ_G0016896	Mrm1	98	80.564	ENSVVUG00000018420	MRM1	77	80.564	Vulpes_vulpes
MGP_CAROLIEiJ_G0016896	Mrm1	85	48.239	ENSXCOG00000003622	mrm1	78	48.239	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016896	Mrm1	88	47.603	ENSXMAG00000014890	mrm1	79	47.603	Xiphophorus_maculatus