EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0016920 (Gene tree)
Gene ID: 110305579
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 40623 bases
Position: chr11:81968649-82009271
Accession: 110305579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0029015	DEAD	PF00270.29	1.4e-08	1	1
MGP_CAROLIEiJ_P0029016	HA2	PF04408.23	2.9e-15	1	1
MGP_CAROLIEiJ_P0029015	HA2	PF04408.23	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0029018	-	627	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0029015	-	3758	-	MGP_CAROLIEiJ_P0029015	779 (aa)	XP_021033254	UPI000A318F43
MGP_CAROLIEiJ_T0029016	-	912	-	MGP_CAROLIEiJ_P0029016	304 (aa)	-	-
MGP_CAROLIEiJ_T0029017	-	635	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0016920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0016920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0016920	Dhx40	90	35.124	MGP_CAROLIEiJ_G0024595	Dhx35	99	35.124
MGP_CAROLIEiJ_G0016920	Dhx40	83	42.041	MGP_CAROLIEiJ_G0027766	Dhx37	64	42.041
MGP_CAROLIEiJ_G0016920	Dhx40	99	37.004	MGP_CAROLIEiJ_G0021538	Dhx16	65	42.012
MGP_CAROLIEiJ_G0016920	Dhx40	99	32.340	MGP_CAROLIEiJ_G0016657	Dhx33	89	37.348
MGP_CAROLIEiJ_G0016920	Dhx40	99	34.728	MGP_CAROLIEiJ_G0027214	Dhx15	79	43.103
MGP_CAROLIEiJ_G0016920	Dhx40	97	40.088	MGP_CAROLIEiJ_G0017228	Dhx8	50	43.645
MGP_CAROLIEiJ_G0016920	Dhx40	84	40.429	MGP_CAROLIEiJ_G0031541	Dhx38	54	38.549
MGP_CAROLIEiJ_G0016920	Dhx40	66	30.755	MGP_CAROLIEiJ_G0018145	Tdrd9	89	31.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSG00000108406	DHX40	100	97.561	Homo_sapiens
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	ENSAPOG00000018707	dhx40	98	66.528	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.689	ENSAMEG00000011567	DHX40	100	97.689	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0016920	Dhx40	91	65.730	ENSACIG00000020220	dhx40	98	65.560	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0016920	Dhx40	100	65.269	ENSAOCG00000000250	dhx40	98	66.390	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0016920	Dhx40	100	65.269	ENSAPEG00000022898	dhx40	97	66.528	Amphiprion_percula
MGP_CAROLIEiJ_G0016920	Dhx40	91	66.011	ENSATEG00000023287	dhx40	98	65.837	Anabas_testudineus
MGP_CAROLIEiJ_G0016920	Dhx40	100	72.455	ENSAPLG00000013368	DHX40	100	72.549	Anas_platyrhynchos
MGP_CAROLIEiJ_G0016920	Dhx40	99	65.868	ENSACAG00000012418	DHX40	99	68.213	Anolis_carolinensis
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.689	ENSANAG00000019888	DHX40	100	97.959	Aotus_nancymaae
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSACLG00000024213	dhx40	97	66.111	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSAMXG00000002031	dhx40	95	64.942	Astyanax_mexicanus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.689	ENSBTAG00000017868	DHX40	100	97.689	Bos_taurus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.433	ENSCJAG00000001554	DHX40	100	97.433	Callithrix_jacchus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSCAFG00000017625	DHX40	100	97.055	Canis_familiaris
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.946	ENSCAFG00020026016	DHX40	91	97.946	Canis_lupus_dingo
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSCHIG00000016173	DHX40	100	97.818	Capra_hircus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSTSYG00000034797	DHX40	100	98.273	Carlito_syrichta
MGP_CAROLIEiJ_G0016920	Dhx40	87	97.727	ENSCAPG00000016034	DHX40	100	97.727	Cavia_aperea
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.697	ENSCPOG00000003432	DHX40	100	97.697	Cavia_porcellus
MGP_CAROLIEiJ_G0016920	Dhx40	100	92.814	ENSCCAG00000028712	DHX40	100	97.357	Cebus_capucinus
MGP_CAROLIEiJ_G0016920	Dhx40	100	93.231	ENSCATG00000030038	DHX40	100	93.231	Cercocebus_atys
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSCLAG00000012016	DHX40	100	99.013	Chinchilla_lanigera
MGP_CAROLIEiJ_G0016920	Dhx40	82	93.730	ENSCSAG00000005860	DHX40	99	93.730	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0016920	Dhx40	100	93.413	ENSCHOG00000004423	DHX40	100	97.841	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0016920	Dhx40	99	74.251	ENSCPBG00000006085	DHX40	97	74.623	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSCANG00000038492	DHX40	100	98.116	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.358	ENSCGRG00001000389	Dhx40	100	99.358	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.358	ENSCGRG00000009491	Dhx40	100	99.358	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0016920	Dhx40	100	65.868	ENSCSEG00000002696	dhx40	98	65.742	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.874	ENSCVAG00000018991	dhx40	97	66.806	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0016920	Dhx40	94	66.118	ENSDARG00000041586	dhx40	99	66.118	Danio_rerio
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSDNOG00000025497	DHX40	100	97.818	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0016920	Dhx40	100	94.608	ENSDORG00000006521	Dhx40	100	94.608	Dipodomys_ordii
MGP_CAROLIEiJ_G0016920	Dhx40	91	91.339	ENSETEG00000018771	DHX40	87	93.333	Echinops_telfairi
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSEASG00005002476	DHX40	100	97.818	Equus_asinus_asinus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.689	ENSECAG00000018606	DHX40	100	97.689	Equus_caballus
MGP_CAROLIEiJ_G0016920	Dhx40	100	93.453	ENSEEUG00000002531	DHX40	100	93.453	Erinaceus_europaeus
MGP_CAROLIEiJ_G0016920	Dhx40	99	64.242	ENSELUG00000008644	dhx40	97	65.422	Esox_lucius
MGP_CAROLIEiJ_G0016920	Dhx40	100	98.074	ENSFCAG00000001409	DHX40	100	98.074	Felis_catus
MGP_CAROLIEiJ_G0016920	Dhx40	100	70.060	ENSFALG00000005587	DHX40	99	69.494	Ficedula_albicollis
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSFDAG00000017214	DHX40	100	99.013	Fukomys_damarensis
MGP_CAROLIEiJ_G0016920	Dhx40	100	63.473	ENSFHEG00000001190	dhx40	99	65.068	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0016920	Dhx40	99	59.880	ENSGMOG00000001188	dhx40	99	62.937	Gadus_morhua
MGP_CAROLIEiJ_G0016920	Dhx40	98	70.060	ENSGALG00000005126	DHX40	100	70.728	Gallus_gallus
MGP_CAROLIEiJ_G0016920	Dhx40	100	63.473	ENSGAFG00000014480	dhx40	98	66.113	Gambusia_affinis
MGP_CAROLIEiJ_G0016920	Dhx40	99	65.269	ENSGACG00000006300	dhx40	99	65.007	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0016920	Dhx40	99	72.455	ENSGAGG00000024012	DHX40	97	73.865	Gopherus_agassizii
MGP_CAROLIEiJ_G0016920	Dhx40	75	88.043	ENSGGOG00000042982	-	100	89.610	Gorilla_gorilla
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSHBUG00000022398	dhx40	97	66.250	Haplochromis_burtoni
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSHGLG00000006600	DHX40	100	99.013	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016920	Dhx40	88	79.326	ENSHGLG00000006411	-	96	79.326	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0016920	Dhx40	88	79.472	ENSHGLG00100009091	-	96	79.472	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSHGLG00100009935	-	100	99.013	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0016920	Dhx40	99	63.855	ENSHCOG00000012913	dhx40	96	64.771	Hippocampus_comes
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSIPUG00000015673	dhx40	97	64.993	Ictalurus_punctatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSSTOG00000016219	DHX40	100	99.013	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	94.095	ENSJJAG00000010433	Dhx40	100	94.095	Jaculus_jaculus
MGP_CAROLIEiJ_G0016920	Dhx40	100	65.269	ENSKMAG00000003505	dhx40	98	65.837	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0016920	Dhx40	100	63.473	ENSLBEG00000018707	dhx40	98	66.944	Labrus_bergylta
MGP_CAROLIEiJ_G0016920	Dhx40	99	66.456	ENSLACG00000008892	DHX40	98	68.336	Latimeria_chalumnae
MGP_CAROLIEiJ_G0016920	Dhx40	92	62.983	ENSLOCG00000003916	dhx40	99	62.983	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSLAFG00000000087	DHX40	100	97.818	Loxodonta_africana
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSMFAG00000041526	DHX40	100	97.959	Macaca_fascicularis
MGP_CAROLIEiJ_G0016920	Dhx40	100	92.426	ENSMNEG00000043921	DHX40	100	92.426	Macaca_nemestrina
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSMLEG00000043033	DHX40	100	97.959	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0016920	Dhx40	91	65.871	ENSMAMG00000001985	dhx40	98	65.698	Mastacembelus_armatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSMZEG00005013826	dhx40	97	66.111	Maylandia_zebra
MGP_CAROLIEiJ_G0016920	Dhx40	100	72.327	ENSMGAG00000007238	DHX40	100	70.497	Meleagris_gallopavo
MGP_CAROLIEiJ_G0016920	Dhx40	100	89.859	ENSMAUG00000014047	Dhx40	100	89.859	Mesocricetus_auratus
MGP_CAROLIEiJ_G0016920	Dhx40	100	98.074	ENSMICG00000027647	DHX40	100	98.074	Microcebus_murinus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.342	ENSMOCG00000022697	Dhx40	100	99.342	Microtus_ochrogaster
MGP_CAROLIEiJ_G0016920	Dhx40	99	62.874	ENSMMOG00000005353	dhx40	97	65.139	Mola_mola
MGP_CAROLIEiJ_G0016920	Dhx40	99	75.518	ENSMODG00000014468	DHX40	99	75.518	Monodelphis_domestica
MGP_CAROLIEiJ_G0016920	Dhx40	92	65.975	ENSMALG00000012529	dhx40	98	65.975	Monopterus_albus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.872	ENSMUSG00000018425	Dhx40	100	99.872	Mus_musculus
MGP_CAROLIEiJ_G0016920	Dhx40	100	100.000	MGP_PahariEiJ_G0018050	Dhx40	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.872	MGP_SPRETEiJ_G0017766	Dhx40	100	99.872	Mus_spretus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.946	ENSMPUG00000015213	DHX40	100	97.946	Mustela_putorius_furo
MGP_CAROLIEiJ_G0016920	Dhx40	100	95.897	ENSMLUG00000003644	DHX40	100	95.897	Myotis_lucifugus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSNGAG00000014507	Dhx40	100	99.013	Nannospalax_galili
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.874	ENSNBRG00000018144	dhx40	98	65.698	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0016920	Dhx40	73	82.500	ENSMEUG00000002887	-	88	82.500	Notamacropus_eugenii
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.013	ENSODEG00000013635	DHX40	100	99.013	Octodon_degus
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.874	ENSONIG00000005195	dhx40	100	66.066	Oreochromis_niloticus
MGP_CAROLIEiJ_G0016920	Dhx40	95	76.478	ENSOANG00000008516	DHX40	99	76.478	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0016920	Dhx40	99	62.275	ENSORLG00000014185	dhx40	99	65.608	Oryzias_latipes
MGP_CAROLIEiJ_G0016920	Dhx40	99	62.275	ENSORLG00015016235	dhx40	99	65.427	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0016920	Dhx40	99	62.275	ENSOMEG00000006570	dhx40	99	66.390	Oryzias_melastigma
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.946	ENSOGAG00000007790	DHX40	100	97.946	Otolemur_garnettii
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.818	ENSOARG00000012632	DHX40	100	97.818	Ovis_aries
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.176	ENSPPAG00000032782	DHX40	100	97.176	Pan_paniscus
MGP_CAROLIEiJ_G0016920	Dhx40	100	98.074	ENSPPRG00000010073	DHX40	100	98.074	Panthera_pardus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSPTIG00000006557	DHX40	100	97.959	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.561	ENSPANG00000022266	DHX40	100	97.959	Papio_anubis
MGP_CAROLIEiJ_G0016920	Dhx40	100	58.683	ENSPKIG00000013016	dhx40	97	64.404	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0016920	Dhx40	99	73.054	ENSPSIG00000010463	DHX40	95	71.846	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSPMGG00000015257	dhx40	97	66.017	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.671	ENSPEMG00000013338	Dhx40	100	99.671	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0016920	Dhx40	93	78.650	ENSPCIG00000021874	DHX40	95	78.650	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSPFOG00000006579	dhx40	98	65.698	Poecilia_formosa
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSPLAG00000007062	dhx40	98	65.698	Poecilia_latipinna
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSPMEG00000008446	dhx40	98	65.837	Poecilia_mexicana
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSPREG00000005584	dhx40	98	65.975	Poecilia_reticulata
MGP_CAROLIEiJ_G0016920	Dhx40	100	94.480	ENSPPYG00000008812	DHX40	100	94.480	Pongo_abelii
MGP_CAROLIEiJ_G0016920	Dhx40	80	98.701	ENSPCAG00000006468	DHX40	83	98.246	Procavia_capensis
MGP_CAROLIEiJ_G0016920	Dhx40	96	93.413	ENSPCOG00000008219	DHX40	100	89.189	Propithecus_coquereli
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSPNYG00000013343	dhx40	97	66.111	Pundamilia_nyererei
MGP_CAROLIEiJ_G0016920	Dhx40	100	63.473	ENSPNAG00000024815	dhx40	97	61.506	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0016920	Dhx40	100	99.358	ENSRNOG00000004549	Dhx40	100	99.358	Rattus_norvegicus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.433	ENSSBOG00000024911	DHX40	100	97.959	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0016920	Dhx40	99	74.805	ENSSHAG00000016859	DHX40	99	74.805	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0016920	Dhx40	100	62.275	ENSSFOG00015003020	dhx40	97	66.158	Scleropages_formosus
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.072	ENSSMAG00000001178	dhx40	98	65.789	Scophthalmus_maximus
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	ENSSDUG00000012511	dhx40	98	65.837	Seriola_dumerili
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	ENSSLDG00000010146	dhx40	98	66.113	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0016920	Dhx40	88	100.000	ENSSARG00000009800	DHX40	87	97.387	Sorex_araneus
MGP_CAROLIEiJ_G0016920	Dhx40	99	71.257	ENSSPUG00000016309	DHX40	96	74.826	Sphenodon_punctatus
MGP_CAROLIEiJ_G0016920	Dhx40	92	65.374	ENSSPAG00000015901	dhx40	99	65.348	Stegastes_partitus
MGP_CAROLIEiJ_G0016920	Dhx40	100	98.074	ENSSSCG00000017665	DHX40	100	98.074	Sus_scrofa
MGP_CAROLIEiJ_G0016920	Dhx40	100	71.257	ENSTGUG00000007512	DHX40	100	70.411	Taeniopygia_guttata
MGP_CAROLIEiJ_G0016920	Dhx40	92	62.639	ENSTRUG00000010369	dhx40	97	62.639	Takifugu_rubripes
MGP_CAROLIEiJ_G0016920	Dhx40	92	61.806	ENSTNIG00000004503	dhx40	100	61.806	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0016920	Dhx40	100	96.791	ENSTBEG00000014980	DHX40	100	96.791	Tupaia_belangeri
MGP_CAROLIEiJ_G0016920	Dhx40	100	93.413	ENSTTRG00000017203	DHX40	99	93.170	Tursiops_truncatus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.946	ENSUAMG00000009734	DHX40	100	98.235	Ursus_americanus
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.689	ENSUMAG00000022721	DHX40	100	97.689	Ursus_maritimus
MGP_CAROLIEiJ_G0016920	Dhx40	96	97.995	ENSVPAG00000009355	DHX40	100	97.995	Vicugna_pacos
MGP_CAROLIEiJ_G0016920	Dhx40	100	97.946	ENSVVUG00000013502	DHX40	91	97.946	Vulpes_vulpes
MGP_CAROLIEiJ_G0016920	Dhx40	95	81.250	ENSXETG00000010939	dhx40	99	66.667	Xenopus_tropicalis
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	ENSXCOG00000001822	dhx40	96	66.008	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	ENSXMAG00000012466	dhx40	98	65.975	Xiphophorus_maculatus