EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017050 (Gene tree)
Gene ID: 110305761
Gene Symbol: Kpnb1
Alias: Impnb
Full Name: karyopherin (importin) beta 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 28709 bases
Position: chr11:92931464-92960172
Accession: 107532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0029512	IBN_N	PF03810.19	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0029513	-	804	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0029512	-	5534	-	MGP_CAROLIEiJ_P0029512	822 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSG00000108424	KPNB1	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSAPOG00000020572	kpnb1	94	93.552	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017050	Kpnb1	96	98.987	ENSAMEG00000004613	KPNB1	94	98.987	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017050	Kpnb1	98	93.392	ENSACIG00000023130	kpnb1	94	93.392	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSAOCG00000007048	kpnb1	94	93.552	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSAPEG00000008270	kpnb1	94	93.552	Amphiprion_percula
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.066	ENSATEG00000015139	kpnb1	98	93.495	Anabas_testudineus
MGP_CAROLIEiJ_G0017050	Kpnb1	99	94.647	ENSAPLG00000010177	KPNB1	94	94.647	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017050	Kpnb1	100	97.080	ENSACAG00000007097	KPNB1	94	97.080	Anolis_carolinensis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	96.229	ENSANAG00000024932	-	94	96.229	Aotus_nancymaae
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSACLG00000015070	kpnb1	94	93.431	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.674	ENSAMXG00000041903	kpnb1	94	93.674	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSBTAG00000006586	KPNB1	94	99.270	Bos_taurus
MGP_CAROLIEiJ_G0017050	Kpnb1	99	48.916	WBGene00002075	imb-1	92	48.916	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.027	ENSCJAG00000007834	KPNB1	94	99.027	Callithrix_jacchus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSCAFG00000016678	KPNB1	94	99.270	Canis_familiaris
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSCAFG00020023205	KPNB1	94	99.270	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSCHIG00000014896	KPNB1	94	99.270	Capra_hircus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	96.837	ENSTSYG00000014472	KPNB1	94	96.837	Carlito_syrichta
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.240	ENSCAPG00000014185	KPNB1	94	99.240	Cavia_aperea
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSCPOG00000006566	KPNB1	94	99.270	Cavia_porcellus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	78.903	ENSCCAG00000018551	-	94	78.903	Cebus_capucinus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	91.748	ENSCCAG00000029263	-	94	91.748	Cebus_capucinus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSCATG00000037124	KPNB1	94	99.148	Cercocebus_atys
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSCLAG00000017091	KPNB1	94	99.148	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSCSAG00000002605	KPNB1	94	99.148	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017050	Kpnb1	72	84.550	ENSCHOG00000010604	KPNB1	67	84.550	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017050	Kpnb1	98	98.022	ENSCPBG00000027423	KPNB1	89	98.022	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017050	Kpnb1	100	65.617	ENSCING00000004639	-	93	65.617	Ciona_intestinalis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	62.545	ENSCSAVG00000008624	-	94	62.545	Ciona_savignyi
MGP_CAROLIEiJ_G0017050	Kpnb1	96	96.948	ENSCANG00000013489	KPNB1	93	96.948	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.878	ENSCGRG00001016042	Kpnb1	94	99.878	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.873	ENSCGRG00000013910	Kpnb1	94	99.873	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017050	Kpnb1	97	91.353	ENSCSEG00000007991	kpnb1	94	91.353	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	ENSDARG00000104889	kpnb1	94	92.944	Danio_rerio
MGP_CAROLIEiJ_G0017050	Kpnb1	100	62.819	FBgn0262743	Fs(2)Ket	93	62.819	Drosophila_melanogaster
MGP_CAROLIEiJ_G0017050	Kpnb1	98	82.447	ENSEBUG00000013869	kpnb1	92	82.447	Eptatretus_burgeri
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSEASG00005000805	KPNB1	94	99.270	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSECAG00000014560	KPNB1	94	99.270	Equus_caballus
MGP_CAROLIEiJ_G0017050	Kpnb1	84	98.492	ENSEEUG00000005046	KPNB1	82	98.492	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSELUG00000015847	kpnb1	94	93.552	Esox_lucius
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSFCAG00000023994	KPNB1	94	99.270	Felis_catus
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.240	ENSFDAG00000019923	KPNB1	94	99.240	Fukomys_damarensis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.066	ENSFHEG00000020199	kpnb1	94	93.066	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	88.443	ENSGMOG00000011607	kpnb1	93	88.443	Gadus_morhua
MGP_CAROLIEiJ_G0017050	Kpnb1	100	97.324	ENSGALG00000036962	KPNB1	94	97.324	Gallus_gallus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	ENSGAFG00000000783	kpnb1	94	92.944	Gambusia_affinis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	88.929	ENSGACG00000014765	kpnb1	94	88.929	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017050	Kpnb1	96	97.713	ENSGAGG00000023737	KPNB1	86	97.713	Gopherus_agassizii
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSGGOG00000008089	KPNB1	94	99.148	Gorilla_gorilla
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSHBUG00000016826	kpnb1	94	93.431	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSHGLG00000014138	KPNB1	94	99.270	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017050	Kpnb1	98	97.522	ENSHGLG00100006572	KPNB1	94	99.240	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017050	Kpnb1	100	91.727	ENSHCOG00000002084	kpnb1	94	91.727	Hippocampus_comes
MGP_CAROLIEiJ_G0017050	Kpnb1	93	93.135	ENSIPUG00000012402	kpnb1	89	93.135	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.513	ENSSTOG00000007896	KPNB1	94	99.513	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.513	ENSJJAG00000010909	Kpnb1	94	99.513	Jaculus_jaculus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.457	ENSKMAG00000001547	kpnb1	94	92.457	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSLBEG00000025794	kpnb1	94	92.768	Labrus_bergylta
MGP_CAROLIEiJ_G0017050	Kpnb1	94	94.682	ENSLACG00000017620	KPNB1	99	94.682	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.917	ENSLOCG00000013753	kpnb1	94	93.917	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSLAFG00000001328	KPNB1	94	93.431	Loxodonta_africana
MGP_CAROLIEiJ_G0017050	Kpnb1	99	96.337	ENSMFAG00000030197	KPNB1	94	99.113	Macaca_fascicularis
MGP_CAROLIEiJ_G0017050	Kpnb1	99	97.320	ENSMMUG00000019760	KPNB1	94	97.320	Macaca_mulatta
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSMNEG00000040927	KPNB1	94	99.148	Macaca_nemestrina
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.113	ENSMLEG00000038185	KPNB1	90	99.113	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSMAMG00000011036	kpnb1	94	93.552	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSMZEG00005004564	kpnb1	94	93.431	Maylandia_zebra
MGP_CAROLIEiJ_G0017050	Kpnb1	59	97.516	ENSMGAG00000002770	-	100	97.516	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.878	ENSMAUG00000006211	Kpnb1	94	99.878	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSMICG00000012059	KPNB1	79	99.270	Microcebus_murinus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.878	ENSMOCG00000003683	Kpnb1	94	99.878	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.418	ENSMODG00000012505	KPNB1	94	98.418	Monodelphis_domestica
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.674	ENSMALG00000000863	kpnb1	94	93.674	Monopterus_albus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	100.000	ENSMUSG00000001440	Kpnb1	94	100.000	Mus_musculus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.177	ENSMPUG00000015220	KPNB1	94	98.177	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.576	ENSMLUG00000014522	KPNB1	94	93.576	Myotis_lucifugus
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.620	ENSNGAG00000017610	Kpnb1	94	99.620	Nannospalax_galili
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSNBRG00000019305	kpnb1	94	93.431	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSNLEG00000001446	KPNB1	94	99.148	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.457	ENSMEUG00000014284	KPNB1	94	92.457	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.905	ENSODEG00000017287	KPNB1	94	98.905	Octodon_degus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSONIG00000009269	kpnb1	94	93.552	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSOCUG00000015425	KPNB1	94	99.270	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSORLG00000019936	kpnb1	94	93.431	Oryzias_latipes
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSORLG00020021181	kpnb1	94	93.431	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.309	ENSORLG00015012177	kpnb1	94	93.309	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSOMEG00000021022	kpnb1	94	93.552	Oryzias_melastigma
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSOGAG00000006153	KPNB1	94	99.148	Otolemur_garnettii
MGP_CAROLIEiJ_G0017050	Kpnb1	97	98.125	ENSOARG00000008469	KPNB1	92	98.125	Ovis_aries
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSPPAG00000028842	KPNB1	94	99.148	Pan_paniscus
MGP_CAROLIEiJ_G0017050	Kpnb1	99	96.450	ENSPPRG00000022879	KPNB1	93	96.450	Panthera_pardus
MGP_CAROLIEiJ_G0017050	Kpnb1	99	96.450	ENSPTIG00000006870	KPNB1	93	96.450	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSPTRG00000009333	KPNB1	94	99.148	Pan_troglodytes
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSPANG00000022099	KPNB1	94	99.148	Papio_anubis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	ENSPKIG00000017563	kpnb1	94	93.431	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017050	Kpnb1	96	98.226	ENSPSIG00000009775	KPNB1	94	98.226	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	88.943	ENSPMGG00000001041	kpnb1	87	88.943	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.878	ENSPEMG00000017783	Kpnb1	94	99.878	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017050	Kpnb1	100	85.939	ENSPMAG00000007117	kpnb1	94	85.939	Petromyzon_marinus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.418	ENSPCIG00000001034	KPNB1	94	98.418	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	ENSPFOG00000009014	kpnb1	94	92.944	Poecilia_formosa
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	ENSPLAG00000010922	kpnb1	94	92.944	Poecilia_latipinna
MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	ENSPREG00000012268	kpnb1	94	92.944	Poecilia_reticulata
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.662	ENSPPYG00000025935	KPNB1	94	98.662	Pongo_abelii
MGP_CAROLIEiJ_G0017050	Kpnb1	69	89.513	ENSPCAG00000002526	KPNB1	67	89.513	Procavia_capensis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSPCOG00000026259	KPNB1	94	99.270	Propithecus_coquereli
MGP_CAROLIEiJ_G0017050	Kpnb1	100	98.783	ENSPVAG00000004910	KPNB1	94	98.783	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	88.979	ENSPNYG00000017703	kpnb1	96	93.495	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017050	Kpnb1	98	85.104	ENSPNAG00000024047	kpnb1	92	85.104	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017050	Kpnb1	100	100.000	ENSRNOG00000009275	Kpnb1	94	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSRBIG00000002254	KPNB1	94	99.148	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017050	Kpnb1	99	98.645	ENSRROG00000030419	KPNB1	93	98.645	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017050	Kpnb1	99	35.024	YLR347C	KAP95	93	34.903	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.148	ENSSBOG00000030025	KPNB1	88	99.148	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017050	Kpnb1	96	98.108	ENSSHAG00000018214	KPNB1	94	98.108	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017050	Kpnb1	100	94.039	ENSSFOG00015020000	kpnb1	94	94.039	Scleropages_formosus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.674	ENSSDUG00000016218	kpnb1	94	93.674	Seriola_dumerili
MGP_CAROLIEiJ_G0017050	Kpnb1	98	93.657	ENSSLDG00000021549	kpnb1	91	93.657	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	97.324	ENSSPUG00000017799	KPNB1	94	97.324	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.552	ENSSPAG00000019346	kpnb1	94	93.552	Stegastes_partitus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSSSCG00000017514	KPNB1	94	99.270	Sus_scrofa
MGP_CAROLIEiJ_G0017050	Kpnb1	96	92.395	ENSTGUG00000003387	KPNB1	94	92.395	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017050	Kpnb1	100	90.876	ENSTRUG00000000542	kpnb1	94	90.876	Takifugu_rubripes
MGP_CAROLIEiJ_G0017050	Kpnb1	100	90.998	ENSTNIG00000006494	kpnb1	94	90.998	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017050	Kpnb1	96	99.113	ENSTTRG00000004682	KPNB1	94	99.113	Tursiops_truncatus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSUAMG00000025344	KPNB1	94	99.270	Ursus_americanus
MGP_CAROLIEiJ_G0017050	Kpnb1	98	97.891	ENSUMAG00000016471	KPNB1	92	97.891	Ursus_maritimus
MGP_CAROLIEiJ_G0017050	Kpnb1	100	84.185	ENSVPAG00000003675	KPNB1	94	84.185	Vicugna_pacos
MGP_CAROLIEiJ_G0017050	Kpnb1	100	99.270	ENSVVUG00000003085	KPNB1	94	99.270	Vulpes_vulpes
MGP_CAROLIEiJ_G0017050	Kpnb1	100	94.769	ENSXETG00000014717	kpnb1	94	94.769	Xenopus_tropicalis
MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.066	ENSXMAG00000018792	kpnb1	94	93.066	Xiphophorus_maculatus