EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017064 (Gene tree)
Gene ID: 110305280
Gene Symbol: Cwc25
Alias: 1300013D05Rik|Ccdc49|R75228
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 22546 bases
Position: chr11:93526521-93549066
Accession: 110305280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0029565	CWC25	PF12542.8	5.5e-20	1	1
MGP_CAROLIEiJ_P0029567	CWC25	PF12542.8	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0029564	-	2433	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0029565	-	3111	-	MGP_CAROLIEiJ_P0029565	409 (aa)	XP_021032842	UPI000A319D48
MGP_CAROLIEiJ_T0029566	-	670	-	MGP_CAROLIEiJ_P0029566	124 (aa)	-	-
MGP_CAROLIEiJ_T0029567	-	1832	-	MGP_CAROLIEiJ_P0029567	206 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.647	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.568	ENSAMEG00000004292	CWC25	100	83.059	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017064	Cwc25	69	73.239	ENSAPEG00000013237	cwc25	100	53.396	Amphiprion_percula
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.030	ENSATEG00000000799	cwc25	100	54.265	Anabas_testudineus
MGP_CAROLIEiJ_G0017064	Cwc25	99	67.849	ENSAPLG00000003710	CWC25	99	65.485	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017064	Cwc25	100	70.773	ENSACAG00000013140	CWC25	100	67.797	Anolis_carolinensis
MGP_CAROLIEiJ_G0017064	Cwc25	100	70.803	ENSANAG00000033550	CWC25	91	85.714	Aotus_nancymaae
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.544	ENSACLG00000009352	cwc25	100	53.286	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017064	Cwc25	99	51.951	ENSAMXG00000035125	cwc25	99	51.707	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.176	ENSBTAG00000030591	CWC25	100	85.412	Bos_taurus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.568	ENSCJAG00000008289	CWC25	100	84.000	Callithrix_jacchus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.095	ENSCAFG00000016561	CWC25	100	84.048	Canis_familiaris
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.333	ENSCAFG00020023017	CWC25	100	83.810	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.706	ENSCHIG00000015063	CWC25	100	84.941	Capra_hircus
MGP_CAROLIEiJ_G0017064	Cwc25	100	77.230	ENSTSYG00000011332	CWC25	100	73.239	Carlito_syrichta
MGP_CAROLIEiJ_G0017064	Cwc25	99	76.429	ENSCAPG00000014542	CWC25	99	78.708	Cavia_aperea
MGP_CAROLIEiJ_G0017064	Cwc25	100	78.986	ENSCPOG00000015127	CWC25	100	79.952	Cavia_porcellus
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.742	ENSCCAG00000028719	CWC25	100	83.333	Cebus_capucinus
MGP_CAROLIEiJ_G0017064	Cwc25	100	80.562	ENSCATG00000040771	CWC25	100	80.941	Cercocebus_atys
MGP_CAROLIEiJ_G0017064	Cwc25	100	79.286	ENSCLAG00000017102	CWC25	92	94.737	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017064	Cwc25	100	86.288	ENSCSAG00000002654	CWC25	100	85.816	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017064	Cwc25	99	74.940	ENSCPBG00000027490	CWC25	88	72.289	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017064	Cwc25	100	79.859	ENSCANG00000037099	CWC25	100	80.235	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	91.169	ENSCGRG00001020785	Cwc25	100	91.408	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017064	Cwc25	100	91.169	ENSCGRG00000005085	Cwc25	100	91.408	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017064	Cwc25	100	49.661	ENSCVAG00000007828	cwc25	100	52.347	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	53.957	ENSDARG00000003382	cwc25	100	54.369	Danio_rerio
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.333	ENSDNOG00000042410	CWC25	100	83.099	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017064	Cwc25	100	86.256	ENSDORG00000003061	Cwc25	100	84.834	Dipodomys_ordii
MGP_CAROLIEiJ_G0017064	Cwc25	69	43.210	FBgn0031452	Cwc25	54	43.085	Drosophila_melanogaster
MGP_CAROLIEiJ_G0017064	Cwc25	100	50.608	ENSEBUG00000002947	cwc25	95	57.895	Eptatretus_burgeri
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.706	ENSEASG00005001871	CWC25	100	84.941	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.941	ENSECAG00000019122	CWC25	100	85.176	Equus_caballus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.059	ENSFCAG00000028119	CWC25	100	82.588	Felis_catus
MGP_CAROLIEiJ_G0017064	Cwc25	99	58.974	ENSFALG00000013293	CWC25	99	58.255	Ficedula_albicollis
MGP_CAROLIEiJ_G0017064	Cwc25	100	74.272	ENSFDAG00000007745	CWC25	100	75.895	Fukomys_damarensis
MGP_CAROLIEiJ_G0017064	Cwc25	100	54.048	ENSFHEG00000004754	cwc25	100	54.048	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017064	Cwc25	69	69.014	ENSGMOG00000013001	cwc25	67	71.084	Gadus_morhua
MGP_CAROLIEiJ_G0017064	Cwc25	100	73.141	ENSGALG00000001624	CWC25	100	71.942	Gallus_gallus
MGP_CAROLIEiJ_G0017064	Cwc25	69	72.535	ENSGAFG00000007492	cwc25	100	52.143	Gambusia_affinis
MGP_CAROLIEiJ_G0017064	Cwc25	100	75.534	ENSGAGG00000022972	CWC25	100	72.684	Gopherus_agassizii
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.176	ENSGGOG00000007083	CWC25	100	84.471	Gorilla_gorilla
MGP_CAROLIEiJ_G0017064	Cwc25	100	50.952	ENSHBUG00000001392	cwc25	100	53.271	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017064	Cwc25	100	78.795	ENSHGLG00000014785	CWC25	100	78.795	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017064	Cwc25	100	75.294	ENSHGLG00100017354	CWC25	100	76.706	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017064	Cwc25	69	73.239	ENSHCOG00000002434	cwc25	100	52.459	Hippocampus_comes
MGP_CAROLIEiJ_G0017064	Cwc25	100	53.461	ENSIPUG00000012581	CWC25	100	50.000	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.941	ENSSTOG00000014268	CWC25	100	83.294	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	49.099	ENSKMAG00000015418	cwc25	99	54.157	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017064	Cwc25	85	53.582	ENSLACG00000001743	CWC25	100	52.125	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017064	Cwc25	100	54.632	ENSLOCG00000013707	cwc25	100	53.953	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.373	ENSLAFG00000002238	CWC25	100	81.948	Loxodonta_africana
MGP_CAROLIEiJ_G0017064	Cwc25	84	83.380	ENSMFAG00000002357	CWC25	100	84.211	Macaca_fascicularis
MGP_CAROLIEiJ_G0017064	Cwc25	84	83.657	ENSMMUG00000002944	CWC25	90	84.211	Macaca_mulatta
MGP_CAROLIEiJ_G0017064	Cwc25	100	86.118	ENSMNEG00000033729	CWC25	100	86.588	Macaca_nemestrina
MGP_CAROLIEiJ_G0017064	Cwc25	91	85.271	ENSMLEG00000033355	CWC25	99	85.788	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.196	ENSMAMG00000005194	cwc25	100	52.370	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.544	ENSMZEG00005012421	cwc25	100	53.286	Maylandia_zebra
MGP_CAROLIEiJ_G0017064	Cwc25	99	72.076	ENSMGAG00000005158	CWC25	99	70.335	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017064	Cwc25	100	86.118	ENSMICG00000003004	CWC25	100	84.706	Microcebus_murinus
MGP_CAROLIEiJ_G0017064	Cwc25	100	90.692	ENSMOCG00000000224	Cwc25	100	91.408	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017064	Cwc25	100	80.383	ENSMODG00000012627	CWC25	100	81.100	Monodelphis_domestica
MGP_CAROLIEiJ_G0017064	Cwc25	100	97.087	ENSMUSG00000018541	Cwc25	100	97.087	Mus_musculus
MGP_CAROLIEiJ_G0017064	Cwc25	100	93.285	MGP_PahariEiJ_G0018193	Cwc25	100	93.046	Mus_pahari
MGP_CAROLIEiJ_G0017064	Cwc25	100	95.913	MGP_SPRETEiJ_G0017910	Cwc25	100	95.913	Mus_spretus
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.286	ENSMPUG00000015077	CWC25	100	84.286	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.941	ENSMLUG00000029653	CWC25	100	85.412	Myotis_lucifugus
MGP_CAROLIEiJ_G0017064	Cwc25	69	98.601	ENSMLUG00000029248	-	98	98.204	Myotis_lucifugus
MGP_CAROLIEiJ_G0017064	Cwc25	100	87.707	ENSNGAG00000007394	Cwc25	100	86.998	Nannospalax_galili
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.941	ENSNLEG00000000617	CWC25	100	84.235	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017064	Cwc25	99	82.282	ENSMEUG00000004156	CWC25	100	82.039	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017064	Cwc25	84	64.835	ENSOPRG00000001941	CWC25	100	66.667	Ochotona_princeps
MGP_CAROLIEiJ_G0017064	Cwc25	100	78.657	ENSODEG00000017487	CWC25	100	80.383	Octodon_degus
MGP_CAROLIEiJ_G0017064	Cwc25	69	72.727	ENSONIG00000003251	cwc25	100	54.481	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017064	Cwc25	69	92.958	ENSOANG00000001231	-	100	67.532	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.529	ENSOCUG00000013906	CWC25	100	81.412	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017064	Cwc25	100	52.758	ENSORLG00000018569	cwc25	100	52.758	Oryzias_latipes
MGP_CAROLIEiJ_G0017064	Cwc25	100	52.404	ENSORLG00020012087	cwc25	100	53.606	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.923	ENSORLG00015011062	cwc25	100	51.683	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.332	ENSOMEG00000019365	cwc25	100	50.000	Oryzias_melastigma
MGP_CAROLIEiJ_G0017064	Cwc25	100	78.795	ENSOGAG00000008785	CWC25	100	79.137	Otolemur_garnettii
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.412	ENSOARG00000009937	CWC25	100	85.176	Ovis_aries
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.647	ENSPPAG00000023487	CWC25	100	84.941	Pan_paniscus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.294	ENSPPRG00000005029	CWC25	100	82.824	Panthera_pardus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.294	ENSPTIG00000020264	CWC25	100	82.824	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.412	ENSPTRG00000009077	CWC25	100	84.706	Pan_troglodytes
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.882	ENSPANG00000022017	CWC25	100	86.353	Papio_anubis
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.566	ENSPKIG00000007116	cwc25	100	50.361	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017064	Cwc25	87	71.351	ENSPSIG00000011817	CWC25	99	67.302	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017064	Cwc25	100	88.305	ENSPEMG00000000026	Cwc25	100	89.021	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017064	Cwc25	100	81.340	ENSPCIG00000002943	CWC25	100	81.100	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.905	ENSPFOG00000017152	cwc25	100	52.619	Poecilia_formosa
MGP_CAROLIEiJ_G0017064	Cwc25	96	50.000	ENSPLAG00000004535	cwc25	100	50.743	Poecilia_latipinna
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.905	ENSPMEG00000023752	cwc25	100	52.619	Poecilia_mexicana
MGP_CAROLIEiJ_G0017064	Cwc25	100	84.941	ENSPPYG00000008503	CWC25	100	83.765	Pongo_abelii
MGP_CAROLIEiJ_G0017064	Cwc25	89	78.010	ENSPCAG00000000433	CWC25	100	78.010	Procavia_capensis
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.647	ENSPCOG00000023678	CWC25	100	84.235	Propithecus_coquereli
MGP_CAROLIEiJ_G0017064	Cwc25	99	84.487	ENSPVAG00000002273	CWC25	100	82.339	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017064	Cwc25	100	52.955	ENSPNAG00000028668	cwc25	100	51.667	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017064	Cwc25	100	91.827	ENSRNOG00000004091	Cwc25	100	91.346	Rattus_norvegicus
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.412	ENSRBIG00000033457	CWC25	100	85.647	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017064	Cwc25	100	85.647	ENSRROG00000039968	CWC25	100	85.882	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017064	Cwc25	100	82.536	ENSSHAG00000017267	CWC25	100	80.576	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017064	Cwc25	100	53.222	ENSSFOG00015003449	cwc25	100	53.207	Scleropages_formosus
MGP_CAROLIEiJ_G0017064	Cwc25	100	51.259	ENSSLDG00000005761	cwc25	100	52.955	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017064	Cwc25	84	75.070	ENSSARG00000006871	CWC25	100	73.464	Sorex_araneus
MGP_CAROLIEiJ_G0017064	Cwc25	100	74.171	ENSSPUG00000018024	CWC25	100	71.564	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.294	ENSSSCG00000021478	CWC25	100	83.529	Sus_scrofa
MGP_CAROLIEiJ_G0017064	Cwc25	99	63.121	ENSTGUG00000003011	CWC25	100	63.593	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017064	Cwc25	100	52.246	ENSTRUG00000004650	cwc25	100	52.506	Takifugu_rubripes
MGP_CAROLIEiJ_G0017064	Cwc25	99	73.270	ENSTBEG00000013187	CWC25	100	73.270	Tupaia_belangeri
MGP_CAROLIEiJ_G0017064	Cwc25	99	84.487	ENSTTRG00000006662	CWC25	100	84.726	Tursiops_truncatus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.529	ENSUAMG00000005592	CWC25	100	83.294	Ursus_americanus
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.294	ENSUMAG00000017097	CWC25	100	83.059	Ursus_maritimus
MGP_CAROLIEiJ_G0017064	Cwc25	99	75.663	ENSVPAG00000005680	CWC25	100	75.663	Vicugna_pacos
MGP_CAROLIEiJ_G0017064	Cwc25	100	83.095	ENSVVUG00000002182	CWC25	100	84.048	Vulpes_vulpes
MGP_CAROLIEiJ_G0017064	Cwc25	99	63.793	ENSXETG00000023722	cwc25	100	63.145	Xenopus_tropicalis
MGP_CAROLIEiJ_G0017064	Cwc25	69	73.239	ENSXMAG00000018113	cwc25	100	54.654	Xiphophorus_maculatus