EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017071 (Gene tree)
Gene ID: 110304212
Gene Symbol: Arl5c
Alias: Arl12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 6144 bases
Position: chr11:93774867-93781010
Accession: 110304212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0029599	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0029599	-	1573	XM_021175440	MGP_CAROLIEiJ_P0029599	179 (aa)	XP_021031099	UPI000A31698B
MGP_CAROLIEiJ_T0029600	-	694	-	MGP_CAROLIEiJ_P0029600	98 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0017071	Arl5c	98	45.455	MGP_CAROLIEiJ_G0016431	-	97	45.455
MGP_CAROLIEiJ_G0017071	Arl5c	84	41.509	MGP_CAROLIEiJ_G0014402	Arl4c	82	41.509
MGP_CAROLIEiJ_G0017071	Arl5c	63	31.579	MGP_CAROLIEiJ_G0018537	Arl10	55	31.579
MGP_CAROLIEiJ_G0017071	Arl5c	99	37.705	MGP_CAROLIEiJ_G0020853	Arl6	97	37.569
MGP_CAROLIEiJ_G0017071	Arl5c	99	40.782	MGP_CAROLIEiJ_G0023039	Arl3	98	40.782
MGP_CAROLIEiJ_G0017071	Arl5c	96	42.775	MGP_CAROLIEiJ_G0028156	Arf5	96	42.775
MGP_CAROLIEiJ_G0017071	Arl5c	87	39.506	MGP_CAROLIEiJ_G0017715	Arl4a	81	39.506
MGP_CAROLIEiJ_G0017071	Arl5c	88	41.139	MGP_CAROLIEiJ_G0022597	Arl2	86	41.139
MGP_CAROLIEiJ_G0017071	Arl5c	63	30.833	MGP_CAROLIEiJ_G0017386	Rab37	55	30.833
MGP_CAROLIEiJ_G0017071	Arl5c	86	35.625	MGP_CAROLIEiJ_G0017227	Arl4d	80	35.625
MGP_CAROLIEiJ_G0017071	Arl5c	98	72.571	MGP_CAROLIEiJ_G0023557	Arl5a	98	72.571
MGP_CAROLIEiJ_G0017071	Arl5c	95	36.994	MGP_CAROLIEiJ_G0025066	Arl14	89	36.994
MGP_CAROLIEiJ_G0017071	Arl5c	98	44.886	MGP_CAROLIEiJ_G0017288	Arf2	97	44.886
MGP_CAROLIEiJ_G0017071	Arl5c	87	39.103	MGP_CAROLIEiJ_G0019382	Arl11	89	39.103
MGP_CAROLIEiJ_G0017071	Arl5c	98	73.714	MGP_CAROLIEiJ_G0023197	Arl5b	97	73.714
MGP_CAROLIEiJ_G0017071	Arl5c	98	44.318	MGP_CAROLIEiJ_G0020244	Arf3	97	44.318
MGP_CAROLIEiJ_G0017071	Arl5c	89	45.283	MGP_CAROLIEiJ_G0015712	Arl1	96	43.931
MGP_CAROLIEiJ_G0017071	Arl5c	96	37.705	MGP_CAROLIEiJ_G0024805	Arfrp1	93	40.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017071	Arl5c	100	84.916	ENSAMEG00000004195	ARL5C	99	84.916	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017071	Arl5c	99	79.213	ENSACAG00000003879	-	99	79.213	Anolis_carolinensis
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.827	ENSCAFG00000016525	ARL5C	100	88.827	Canis_familiaris
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	ENSCHIG00000008208	ARL5C	100	88.268	Capra_hircus
MGP_CAROLIEiJ_G0017071	Arl5c	59	86.792	ENSCHOG00000013232	-	100	86.792	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017071	Arl5c	99	88.701	ENSCGRG00001000695	Arl5c	99	88.701	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017071	Arl5c	99	89.266	ENSCGRG00000007376	Arl5c	99	89.266	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	ENSDNOG00000019741	ARL5C	100	88.268	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017071	Arl5c	100	87.151	ENSDORG00000016304	Arl5c	100	87.151	Dipodomys_ordii
MGP_CAROLIEiJ_G0017071	Arl5c	93	87.349	ENSEASG00005001922	ARL5C	77	87.349	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.827	ENSECAG00000009024	ARL5C	100	88.827	Equus_caballus
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.827	ENSFCAG00000009962	ARL5C	100	88.827	Felis_catus
MGP_CAROLIEiJ_G0017071	Arl5c	100	91.620	ENSSTOG00000011104	ARL5C	100	91.620	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017071	Arl5c	100	78.212	ENSLACG00000015332	ARL5C	100	78.212	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017071	Arl5c	100	89.944	ENSLAFG00000018248	ARL5C	99	89.944	Loxodonta_africana
MGP_CAROLIEiJ_G0017071	Arl5c	99	84.831	ENSMAUG00000012845	Arl5c	88	84.831	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017071	Arl5c	100	89.385	ENSMICG00000002661	ARL5C	100	89.385	Microcebus_murinus
MGP_CAROLIEiJ_G0017071	Arl5c	100	84.358	ENSMOCG00000000234	Arl5c	100	84.358	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017071	Arl5c	100	98.324	ENSMUSG00000038352	Arl5c	100	98.324	Mus_musculus
MGP_CAROLIEiJ_G0017071	Arl5c	100	97.207	MGP_PahariEiJ_G0018200	Arl5c	100	97.207	Mus_pahari
MGP_CAROLIEiJ_G0017071	Arl5c	100	98.324	MGP_SPRETEiJ_G0017917	Arl5c	100	98.324	Mus_spretus
MGP_CAROLIEiJ_G0017071	Arl5c	100	87.709	ENSMLUG00000030149	ARL5C	99	87.709	Myotis_lucifugus
MGP_CAROLIEiJ_G0017071	Arl5c	100	85.475	ENSOGAG00000005894	ARL5C	100	85.475	Otolemur_garnettii
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.827	ENSOARG00000010377	ARL5C	99	88.827	Ovis_aries
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.827	ENSPPRG00000000975	ARL5C	100	88.827	Panthera_pardus
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	ENSPTIG00000017487	ARL5C	100	88.268	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017071	Arl5c	99	95.480	ENSPEMG00000008932	Arl5c	99	95.480	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017071	Arl5c	100	90.503	ENSPCOG00000028489	ARL5C	100	90.503	Propithecus_coquereli
MGP_CAROLIEiJ_G0017071	Arl5c	94	88.095	ENSPVAG00000008495	ARL5C	99	88.095	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017071	Arl5c	100	93.855	ENSRNOG00000036880	Arl5c	100	93.855	Rattus_norvegicus
MGP_CAROLIEiJ_G0017071	Arl5c	98	75.568	ENSSBOG00000021022	ARL5C	100	75.568	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017071	Arl5c	96	78.947	ENSSPUG00000007555	ARL5C	100	80.982	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017071	Arl5c	100	87.151	ENSTBEG00000007274	ARL5C	100	87.151	Tupaia_belangeri
MGP_CAROLIEiJ_G0017071	Arl5c	100	87.709	ENSUAMG00000012299	ARL5C	100	87.709	Ursus_americanus
MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	ENSUMAG00000017197	ARL5C	100	88.268	Ursus_maritimus
MGP_CAROLIEiJ_G0017071	Arl5c	100	75.978	ENSXETG00000023713	arl5c	92	75.978	Xenopus_tropicalis