EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017099 (Gene tree)
Gene ID: 110306260
Gene Symbol: Casc3
Alias: Btz|Mln51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 23749 bases
Position: chr11:94725599-94749347
Accession: 110306260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0029715	Btz	PF09405.10	2.6e-23	1	1
MGP_CAROLIEiJ_P0029716	Btz	PF09405.10	2.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0029717	-	368	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0029716	-	3693	-	MGP_CAROLIEiJ_P0029716	698 (aa)	-	UPI000A3195BD
MGP_CAROLIEiJ_T0029715	-	3868	XM_021178442	MGP_CAROLIEiJ_P0029715	698 (aa)	XP_021034101	UPI000A3195BD
MGP_CAROLIEiJ_T0029718	-	605	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	ENSG00000108349	CASC3	100	90.896	Homo_sapiens
MGP_CAROLIEiJ_G0017099	Casc3	100	91.323	ENSAMEG00000007764	CASC3	100	91.750	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017099	Casc3	78	51.699	ENSACIG00000000720	casc3	83	51.499	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017099	Casc3	75	54.045	ENSAOCG00000016676	casc3	61	62.712	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017099	Casc3	75	54.183	ENSAPEG00000006787	casc3	61	62.712	Amphiprion_percula
MGP_CAROLIEiJ_G0017099	Casc3	82	55.732	ENSATEG00000017196	casc3	70	55.159	Anabas_testudineus
MGP_CAROLIEiJ_G0017099	Casc3	99	65.975	ENSACAG00000002674	CASC3	99	66.805	Anolis_carolinensis
MGP_CAROLIEiJ_G0017099	Casc3	99	79.884	ENSANAG00000034820	-	99	79.399	Aotus_nancymaae
MGP_CAROLIEiJ_G0017099	Casc3	66	95.755	ENSANAG00000031954	-	100	95.755	Aotus_nancymaae
MGP_CAROLIEiJ_G0017099	Casc3	100	90.896	ENSBTAG00000006250	CASC3	100	90.896	Bos_taurus
MGP_CAROLIEiJ_G0017099	Casc3	100	89.189	ENSCJAG00000016032	CASC3	100	89.616	Callithrix_jacchus
MGP_CAROLIEiJ_G0017099	Casc3	100	90.754	ENSCAFG00000016141	CASC3	100	91.750	Canis_familiaris
MGP_CAROLIEiJ_G0017099	Casc3	100	89.915	ENSCAFG00020018882	CASC3	100	91.749	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	ENSCHIG00000006338	CASC3	100	89.900	Capra_hircus
MGP_CAROLIEiJ_G0017099	Casc3	100	82.504	ENSTSYG00000002975	CASC3	89	92.295	Carlito_syrichta
MGP_CAROLIEiJ_G0017099	Casc3	88	85.552	ENSCAPG00000010514	CASC3	100	87.338	Cavia_aperea
MGP_CAROLIEiJ_G0017099	Casc3	100	84.900	ENSCPOG00000015139	CASC3	100	86.325	Cavia_porcellus
MGP_CAROLIEiJ_G0017099	Casc3	100	86.932	ENSCCAG00000033620	CASC3	100	90.199	Cebus_capucinus
MGP_CAROLIEiJ_G0017099	Casc3	100	90.909	ENSCATG00000033593	CASC3	100	91.477	Cercocebus_atys
MGP_CAROLIEiJ_G0017099	Casc3	100	87.179	ENSCLAG00000013730	CASC3	100	87.892	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017099	Casc3	100	90.909	ENSCSAG00000002777	CASC3	100	91.477	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017099	Casc3	99	71.208	ENSCPBG00000004750	CASC3	99	72.380	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017099	Casc3	100	90.767	ENSCANG00000008814	CASC3	100	91.335	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017099	Casc3	100	94.722	ENSCGRG00001014706	Casc3	100	95.007	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017099	Casc3	100	87.161	ENSCGRG00000001952	Casc3	96	94.695	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017099	Casc3	82	52.532	ENSCSEG00000010047	casc3	79	50.755	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017099	Casc3	84	58.385	ENSDARG00000029911	casc3	72	58.607	Danio_rerio
MGP_CAROLIEiJ_G0017099	Casc3	100	90.327	ENSDNOG00000017249	CASC3	96	90.754	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017099	Casc3	100	82.788	ENSETEG00000013720	CASC3	100	82.930	Echinops_telfairi
MGP_CAROLIEiJ_G0017099	Casc3	88	37.004	ENSEBUG00000010654	casc3	88	36.103	Eptatretus_burgeri
MGP_CAROLIEiJ_G0017099	Casc3	100	89.787	ENSEASG00005002909	CASC3	100	91.830	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017099	Casc3	100	90.896	ENSECAG00000019947	CASC3	88	91.323	Equus_caballus
MGP_CAROLIEiJ_G0017099	Casc3	73	84.180	ENSEEUG00000014253	CASC3	100	84.961	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017099	Casc3	100	91.750	ENSFCAG00000014998	CASC3	100	92.176	Felis_catus
MGP_CAROLIEiJ_G0017099	Casc3	88	71.003	ENSFALG00000000412	CASC3	98	71.496	Ficedula_albicollis
MGP_CAROLIEiJ_G0017099	Casc3	93	84.018	ENSFDAG00000020696	CASC3	100	84.323	Fukomys_damarensis
MGP_CAROLIEiJ_G0017099	Casc3	74	55.947	ENSFHEG00000015793	casc3	72	56.400	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017099	Casc3	90	74.173	ENSGALG00000031813	CASC3	99	69.373	Gallus_gallus
MGP_CAROLIEiJ_G0017099	Casc3	73	52.419	ENSGAFG00000017148	casc3	54	61.850	Gambusia_affinis
MGP_CAROLIEiJ_G0017099	Casc3	89	73.927	ENSGAGG00000008432	CASC3	94	76.006	Gopherus_agassizii
MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	ENSGGOG00000005067	CASC3	100	90.754	Gorilla_gorilla
MGP_CAROLIEiJ_G0017099	Casc3	100	87.482	ENSHGLG00000012117	CASC3	100	87.767	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017099	Casc3	89	87.220	ENSHGLG00100002268	CASC3	99	87.640	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017099	Casc3	100	90.896	ENSSTOG00000006374	CASC3	100	91.465	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017099	Casc3	100	87.926	ENSJJAG00000023525	Casc3	100	89.915	Jaculus_jaculus
MGP_CAROLIEiJ_G0017099	Casc3	66	63.445	ENSKMAG00000019507	casc3	81	50.000	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017099	Casc3	54	47.475	ENSLBEG00000005435	casc3	86	48.329	Labrus_bergylta
MGP_CAROLIEiJ_G0017099	Casc3	87	59.335	ENSLACG00000013200	CASC3	89	58.986	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017099	Casc3	69	74.396	ENSLOCG00000013518	casc3	65	71.498	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017099	Casc3	100	89.189	ENSLAFG00000000606	CASC3	100	90.043	Loxodonta_africana
MGP_CAROLIEiJ_G0017099	Casc3	100	90.909	ENSMFAG00000041496	CASC3	100	91.477	Macaca_fascicularis
MGP_CAROLIEiJ_G0017099	Casc3	100	90.909	ENSMMUG00000045187	CASC3	100	91.477	Macaca_mulatta
MGP_CAROLIEiJ_G0017099	Casc3	89	90.750	ENSMLEG00000029049	CASC3	98	91.346	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017099	Casc3	82	52.548	ENSMAMG00000005235	casc3	74	57.265	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017099	Casc3	86	72.982	ENSMGAG00000013247	CASC3	99	71.661	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017099	Casc3	71	94.400	ENSMAUG00000006023	Casc3	80	94.024	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017099	Casc3	100	89.189	ENSMICG00000003321	CASC3	100	90.896	Microcebus_murinus
MGP_CAROLIEiJ_G0017099	Casc3	100	94.722	ENSMOCG00000013644	Casc3	100	94.009	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017099	Casc3	100	77.066	ENSMODG00000013044	CASC3	92	79.060	Monodelphis_domestica
MGP_CAROLIEiJ_G0017099	Casc3	100	98.997	ENSMUSG00000078676	Casc3	100	98.997	Mus_musculus
MGP_CAROLIEiJ_G0017099	Casc3	100	98.997	MGP_SPRETEiJ_G0017943	Casc3	100	98.997	Mus_spretus
MGP_CAROLIEiJ_G0017099	Casc3	100	90.612	ENSMPUG00000014903	CASC3	100	91.038	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017099	Casc3	100	87.074	ENSMLUG00000010520	CASC3	100	90.057	Myotis_lucifugus
MGP_CAROLIEiJ_G0017099	Casc3	100	91.143	ENSNGAG00000023121	Casc3	100	92.143	Nannospalax_galili
MGP_CAROLIEiJ_G0017099	Casc3	100	89.758	ENSNLEG00000001598	CASC3	100	90.612	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017099	Casc3	60	70.991	ENSMEUG00000015662	CASC3	100	72.282	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017099	Casc3	73	85.658	ENSOPRG00000007240	-	75	86.471	Ochotona_princeps
MGP_CAROLIEiJ_G0017099	Casc3	100	85.977	ENSODEG00000017858	CASC3	100	87.677	Octodon_degus
MGP_CAROLIEiJ_G0017099	Casc3	79	53.136	ENSOANG00000003499	-	95	53.940	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017099	Casc3	100	91.595	ENSOCUG00000002954	CASC3	100	91.738	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017099	Casc3	99	89.843	ENSOGAG00000034486	CASC3	98	90.844	Otolemur_garnettii
MGP_CAROLIEiJ_G0017099	Casc3	100	91.181	ENSOARG00000013239	CASC3	100	91.181	Ovis_aries
MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	ENSPPAG00000035069	CASC3	100	90.896	Pan_paniscus
MGP_CAROLIEiJ_G0017099	Casc3	100	91.607	ENSPPRG00000023670	CASC3	100	92.034	Panthera_pardus
MGP_CAROLIEiJ_G0017099	Casc3	91	91.052	ENSPTIG00000010891	CASC3	91	91.523	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017099	Casc3	100	90.625	ENSPANG00000021708	CASC3	100	91.193	Papio_anubis
MGP_CAROLIEiJ_G0017099	Casc3	99	47.727	ENSPKIG00000023186	casc3	98	46.582	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017099	Casc3	100	95.571	ENSPEMG00000009774	Casc3	100	95.571	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017099	Casc3	100	80.085	ENSPCIG00000025678	CASC3	100	81.366	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017099	Casc3	89	49.843	ENSPFOG00000017632	casc3	100	47.881	Poecilia_formosa
MGP_CAROLIEiJ_G0017099	Casc3	86	53.755	ENSPLAG00000005268	casc3	87	49.235	Poecilia_latipinna
MGP_CAROLIEiJ_G0017099	Casc3	68	47.648	ENSPMEG00000010299	casc3	73	49.119	Poecilia_mexicana
MGP_CAROLIEiJ_G0017099	Casc3	65	66.429	ENSPREG00000011856	casc3	82	51.706	Poecilia_reticulata
MGP_CAROLIEiJ_G0017099	Casc3	100	89.616	ENSPPYG00000008467	CASC3	100	91.038	Pongo_abelii
MGP_CAROLIEiJ_G0017099	Casc3	100	87.055	ENSPCOG00000008183	CASC3	100	89.331	Propithecus_coquereli
MGP_CAROLIEiJ_G0017099	Casc3	100	88.478	ENSPVAG00000008556	CASC3	100	90.754	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017099	Casc3	91	98.662	ENSRNOG00000009716	Casc3	100	98.662	Rattus_norvegicus
MGP_CAROLIEiJ_G0017099	Casc3	100	91.051	ENSRBIG00000033289	CASC3	100	90.483	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017099	Casc3	100	91.051	ENSRROG00000022337	CASC3	100	91.619	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017099	Casc3	88	88.511	ENSSBOG00000031406	CASC3	98	90.453	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017099	Casc3	89	83.254	ENSSHAG00000013338	CASC3	99	83.173	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017099	Casc3	75	68.750	ENSSMAG00000016096	casc3	67	65.806	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017099	Casc3	85	78.620	ENSSARG00000010378	CASC3	98	78.620	Sorex_araneus
MGP_CAROLIEiJ_G0017099	Casc3	89	89.617	ENSSSCG00000017477	CASC3	98	90.209	Sus_scrofa
MGP_CAROLIEiJ_G0017099	Casc3	74	72.190	ENSTGUG00000002300	CASC3	99	72.190	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017099	Casc3	66	96.698	ENSTBEG00000017459	CASC3	67	96.698	Tupaia_belangeri
MGP_CAROLIEiJ_G0017099	Casc3	86	80.066	ENSTTRG00000016896	CASC3	98	80.640	Tursiops_truncatus
MGP_CAROLIEiJ_G0017099	Casc3	100	90.341	ENSUAMG00000015116	CASC3	100	91.803	Ursus_americanus
MGP_CAROLIEiJ_G0017099	Casc3	89	90.256	ENSUMAG00000017697	CASC3	100	92.784	Ursus_maritimus
MGP_CAROLIEiJ_G0017099	Casc3	76	97.479	ENSVPAG00000000799	CASC3	75	97.479	Vicugna_pacos
MGP_CAROLIEiJ_G0017099	Casc3	100	90.754	ENSVVUG00000000997	CASC3	100	91.750	Vulpes_vulpes
MGP_CAROLIEiJ_G0017099	Casc3	89	61.356	ENSXETG00000024395	casc3	89	61.760	Xenopus_tropicalis
MGP_CAROLIEiJ_G0017099	Casc3	69	63.158	ENSXMAG00000013937	casc3	61	59.474	Xiphophorus_maculatus