EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017215 (Gene tree)
Gene ID: -
Gene Symbol: Gm27029
Alias: -
Full Name: predicted gene%2C 27029
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 19452 bases
Position: chr11:97285760-97305211
Accession: 5504144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0030055	tRNA_SAD	PF07973.14	3.9e-09	1	1
MGP_CAROLIEiJ_P0030053	tRNA_SAD	PF07973.14	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0030055	-	1865	-	MGP_CAROLIEiJ_P0030055	543 (aa)	-	-
MGP_CAROLIEiJ_T0030053	-	1912	-	MGP_CAROLIEiJ_P0030053	525 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0017215	Gm27029	76	99.750	MGP_CAROLIEiJ_G0017216	Aarsd1	97	99.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.476	ENSG00000108825	PTGES3L-AARSD1	100	93.182	Homo_sapiens
MGP_CAROLIEiJ_G0017215	Gm27029	76	89.500	ENSG00000266967	AARSD1	100	90.000	Homo_sapiens
MGP_CAROLIEiJ_G0017215	Gm27029	76	66.250	ENSAPOG00000006776	aarsd1	97	66.250	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.857	ENSAMEG00000000205	-	93	90.926	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017215	Gm27029	76	66.500	ENSACIG00000001519	aarsd1	97	66.500	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.000	ENSAOCG00000014735	aarsd1	97	61.000	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.750	ENSAPEG00000004670	aarsd1	97	65.750	Amphiprion_percula
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.095	ENSATEG00000014178	aarsd1	97	61.347	Anabas_testudineus
MGP_CAROLIEiJ_G0017215	Gm27029	68	76.620	ENSAPLG00000004132	-	97	76.620	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017215	Gm27029	99	74.815	ENSACAG00000013559	-	99	74.815	Anolis_carolinensis
MGP_CAROLIEiJ_G0017215	Gm27029	76	87.750	ENSANAG00000028981	-	98	87.750	Aotus_nancymaae
MGP_CAROLIEiJ_G0017215	Gm27029	76	89.500	ENSANAG00000022313	-	97	89.500	Aotus_nancymaae
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.500	ENSACLG00000013655	aarsd1	97	58.603	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.411	ENSAMXG00000031615	aarsd1	97	64.411	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017215	Gm27029	76	84.954	ENSBTAG00000015136	AARSD1	97	84.954	Bos_taurus
MGP_CAROLIEiJ_G0017215	Gm27029	76	89.223	ENSCJAG00000013086	-	97	89.223	Callithrix_jacchus
MGP_CAROLIEiJ_G0017215	Gm27029	100	92.571	ENSCAFG00000014638	-	93	92.449	Canis_familiaris
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.750	ENSCAFG00020013016	-	80	91.750	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.750	ENSCHIG00000006766	-	97	91.750	Capra_hircus
MGP_CAROLIEiJ_G0017215	Gm27029	59	85.256	ENSTSYG00000034407	-	91	85.256	Carlito_syrichta
MGP_CAROLIEiJ_G0017215	Gm27029	95	78.643	ENSCAPG00000014195	-	99	78.643	Cavia_aperea
MGP_CAROLIEiJ_G0017215	Gm27029	76	81.203	ENSCPOG00000030193	-	97	81.203	Cavia_porcellus
MGP_CAROLIEiJ_G0017215	Gm27029	76	89.250	ENSCCAG00000033455	-	97	89.250	Cebus_capucinus
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.476	ENSCATG00000023451	-	97	89.000	Cercocebus_atys
MGP_CAROLIEiJ_G0017215	Gm27029	68	80.282	ENSCLAG00000016486	-	86	80.000	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017215	Gm27029	76	90.000	ENSCSAG00000003373	-	97	90.000	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017215	Gm27029	100	81.905	ENSCHOG00000004531	-	100	81.905	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017215	Gm27029	76	75.689	ENSCPBG00000016295	-	83	75.689	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017215	Gm27029	74	51.786	ENSCING00000008962	-	97	51.786	Ciona_intestinalis
MGP_CAROLIEiJ_G0017215	Gm27029	75	51.015	ENSCSAVG00000000488	-	96	51.015	Ciona_savignyi
MGP_CAROLIEiJ_G0017215	Gm27029	100	85.714	ENSCANG00000041605	-	97	90.250	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	96.500	ENSCGRG00001022384	-	97	96.500	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017215	Gm27029	76	96.500	ENSCGRG00000015974	-	97	96.500	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.000	ENSCSEG00000000523	aarsd1	97	65.000	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.915	ENSCVAG00000018616	aarsd1	97	65.915	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0017215	Gm27029	74	64.194	ENSDARG00000015747	aarsd1	95	64.194	Danio_rerio
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.500	ENSDNOG00000040976	-	92	91.500	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.857	ENSDORG00000016028	-	100	90.424	Dipodomys_ordii
MGP_CAROLIEiJ_G0017215	Gm27029	74	44.254	FBgn0029664	CG10802	92	44.581	Drosophila_melanogaster
MGP_CAROLIEiJ_G0017215	Gm27029	99	73.282	ENSETEG00000016031	-	100	73.282	Echinops_telfairi
MGP_CAROLIEiJ_G0017215	Gm27029	70	58.038	ENSEBUG00000010336	aarsd1	98	58.038	Eptatretus_burgeri
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.500	ENSEASG00005010061	-	97	91.500	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017215	Gm27029	74	90.513	ENSECAG00000009275	-	88	90.503	Equus_caballus
MGP_CAROLIEiJ_G0017215	Gm27029	100	86.667	ENSEEUG00000008897	-	100	86.667	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017215	Gm27029	75	65.909	ENSELUG00000007588	aarsd1	97	65.909	Esox_lucius
MGP_CAROLIEiJ_G0017215	Gm27029	99	93.443	ENSFCAG00000038399	-	78	93.056	Felis_catus
MGP_CAROLIEiJ_G0017215	Gm27029	99	69.982	ENSFALG00000000757	-	99	69.982	Ficedula_albicollis
MGP_CAROLIEiJ_G0017215	Gm27029	75	64.646	ENSFHEG00000019252	aarsd1	97	64.646	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017215	Gm27029	98	57.143	ENSGMOG00000013229	aarsd1	98	57.143	Gadus_morhua
MGP_CAROLIEiJ_G0017215	Gm27029	76	73.116	ENSGALG00000002880	AARSD1	97	73.116	Gallus_gallus
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.438	ENSGAFG00000011085	aarsd1	97	62.250	Gambusia_affinis
MGP_CAROLIEiJ_G0017215	Gm27029	98	61.240	ENSGACG00000009815	aarsd1	95	68.462	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	76.441	ENSGAGG00000008103	-	97	76.441	Gopherus_agassizii
MGP_CAROLIEiJ_G0017215	Gm27029	100	84.762	ENSGGOG00000006250	PTGES3L-AARSD1	97	89.750	Gorilla_gorilla
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.750	ENSHBUG00000022391	aarsd1	97	65.750	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017215	Gm27029	75	80.808	ENSHGLG00000010802	-	94	80.808	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017215	Gm27029	66	82.659	ENSHGLG00100000638	-	96	82.659	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017215	Gm27029	76	66.250	ENSHCOG00000013491	aarsd1	97	66.250	Hippocampus_comes
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.000	ENSIPUG00000010672	aarsd1	97	64.000	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.750	ENSSTOG00000000481	-	97	91.750	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017215	Gm27029	74	73.077	ENSSTOG00000029510	-	94	73.077	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.250	ENSJJAG00000011149	-	97	91.250	Jaculus_jaculus
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.500	ENSKMAG00000009612	aarsd1	97	65.500	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017215	Gm27029	76	66.500	ENSLBEG00000008445	aarsd1	97	66.500	Labrus_bergylta
MGP_CAROLIEiJ_G0017215	Gm27029	100	68.000	ENSLACG00000006926	aarsd1	99	68.207	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017215	Gm27029	97	65.949	ENSLOCG00000012212	aarsd1	97	69.250	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.667	ENSLAFG00000003022	-	100	90.424	Loxodonta_africana
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.667	ENSMFAG00000034389	-	97	89.250	Macaca_fascicularis
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.667	ENSMMUG00000014123	-	97	89.250	Macaca_mulatta
MGP_CAROLIEiJ_G0017215	Gm27029	100	89.905	ENSMNEG00000037015	-	97	88.500	Macaca_nemestrina
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.667	ENSMLEG00000038627	-	97	89.250	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.750	ENSMAMG00000007918	aarsd1	97	65.750	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.516	ENSMZEG00005009412	aarsd1	97	64.516	Maylandia_zebra
MGP_CAROLIEiJ_G0017215	Gm27029	99	65.000	ENSMGAG00000004245	-	99	65.000	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017215	Gm27029	76	95.750	ENSMAUG00000022119	-	97	95.750	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017215	Gm27029	76	79.000	ENSMICG00000014185	-	97	79.000	Microcebus_murinus
MGP_CAROLIEiJ_G0017215	Gm27029	100	93.002	ENSMOCG00000008732	-	100	93.002	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017215	Gm27029	75	63.520	ENSMMOG00000002681	aarsd1	95	63.520	Mola_mola
MGP_CAROLIEiJ_G0017215	Gm27029	99	90.164	ENSMODG00000015109	-	80	90.278	Monodelphis_domestica
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.000	ENSMALG00000004123	aarsd1	97	64.000	Monopterus_albus
MGP_CAROLIEiJ_G0017215	Gm27029	76	98.500	ENSMUSG00000075528	Aarsd1	97	98.500	Mus_musculus
MGP_CAROLIEiJ_G0017215	Gm27029	100	99.079	ENSMUSG00000097239	Gm27029	100	99.079	Mus_musculus
MGP_CAROLIEiJ_G0017215	Gm27029	76	96.250	MGP_PahariEiJ_G0018346	-	97	96.250	Mus_pahari
MGP_CAROLIEiJ_G0017215	Gm27029	100	96.952	MGP_PahariEiJ_G0018345	-	100	96.952	Mus_pahari
MGP_CAROLIEiJ_G0017215	Gm27029	100	98.527	MGP_SPRETEiJ_G0018058	Gm27029	100	98.527	Mus_spretus
MGP_CAROLIEiJ_G0017215	Gm27029	76	98.000	MGP_SPRETEiJ_G0018059	Aarsd1	97	98.000	Mus_spretus
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.500	ENSMPUG00000009956	-	89	91.500	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017215	Gm27029	76	87.218	ENSMLUG00000024369	-	97	87.218	Myotis_lucifugus
MGP_CAROLIEiJ_G0017215	Gm27029	76	92.500	ENSNGAG00000010786	-	97	92.500	Nannospalax_galili
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.000	ENSNBRG00000021624	aarsd1	97	62.000	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017215	Gm27029	100	83.619	ENSNLEG00000011890	-	97	89.000	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017215	Gm27029	100	71.429	ENSMEUG00000010450	-	100	71.429	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017215	Gm27029	100	85.333	ENSOPRG00000012708	-	100	85.333	Ochotona_princeps
MGP_CAROLIEiJ_G0017215	Gm27029	99	83.764	ENSODEG00000018082	-	99	83.764	Octodon_degus
MGP_CAROLIEiJ_G0017215	Gm27029	100	58.523	ENSONIG00000019893	aarsd1	97	64.750	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017215	Gm27029	54	57.367	ENSOANG00000013149	-	72	71.053	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017215	Gm27029	76	89.750	ENSOCUG00000009259	-	97	89.750	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017215	Gm27029	74	67.179	ENSORLG00000022752	aarsd1	94	67.179	Oryzias_latipes
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.750	ENSORLG00020021477	aarsd1	97	64.750	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017215	Gm27029	74	66.667	ENSORLG00015019664	aarsd1	94	66.667	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017215	Gm27029	61	67.188	ENSOMEG00000000122	aarsd1	85	67.188	Oryzias_melastigma
MGP_CAROLIEiJ_G0017215	Gm27029	76	92.750	ENSOGAG00000003934	-	97	92.750	Otolemur_garnettii
MGP_CAROLIEiJ_G0017215	Gm27029	100	92.000	ENSOARG00000004172	-	97	91.750	Ovis_aries
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.667	ENSPPAG00000032539	-	97	89.750	Pan_paniscus
MGP_CAROLIEiJ_G0017215	Gm27029	76	92.500	ENSPPRG00000013962	-	97	92.500	Panthera_pardus
MGP_CAROLIEiJ_G0017215	Gm27029	78	90.954	ENSPTIG00000012989	-	78	90.954	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.857	ENSPTRG00000009230	-	97	90.000	Pan_troglodytes
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.857	ENSPANG00000021379	-	97	89.500	Papio_anubis
MGP_CAROLIEiJ_G0017215	Gm27029	76	67.750	ENSPKIG00000001834	aarsd1	97	67.750	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017215	Gm27029	54	75.089	ENSPSIG00000004931	-	100	75.089	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017215	Gm27029	100	96.762	ENSPEMG00000018495	-	100	96.501	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.750	ENSPMAG00000002529	aarsd1	97	62.750	Petromyzon_marinus
MGP_CAROLIEiJ_G0017215	Gm27029	76	79.851	ENSPCIG00000021490	-	97	79.851	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017215	Gm27029	100	58.333	ENSPFOG00000014083	aarsd1	97	65.000	Poecilia_formosa
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.000	ENSPLAG00000023398	aarsd1	97	65.000	Poecilia_latipinna
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.843	ENSPMEG00000005191	aarsd1	97	62.843	Poecilia_mexicana
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.750	ENSPREG00000004827	aarsd1	97	64.750	Poecilia_reticulata
MGP_CAROLIEiJ_G0017215	Gm27029	51	90.262	ENSPPYG00000029909	-	100	90.262	Pongo_abelii
MGP_CAROLIEiJ_G0017215	Gm27029	91	88.125	ENSPCAG00000013129	-	100	88.125	Procavia_capensis
MGP_CAROLIEiJ_G0017215	Gm27029	76	92.250	ENSPCOG00000014853	-	97	92.250	Propithecus_coquereli
MGP_CAROLIEiJ_G0017215	Gm27029	100	88.952	ENSPVAG00000008812	-	100	88.952	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.516	ENSPNYG00000019048	aarsd1	97	64.516	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017215	Gm27029	76	63.750	ENSPNAG00000000407	aarsd1	97	63.750	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017215	Gm27029	76	96.000	ENSRNOG00000020658	Aarsd1	97	96.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0017215	Gm27029	76	90.250	ENSRBIG00000040598	-	93	90.250	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017215	Gm27029	100	90.857	ENSRROG00000030505	-	97	89.750	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017215	Gm27029	68	89.326	ENSSBOG00000025962	-	97	89.326	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017215	Gm27029	100	83.523	ENSSHAG00000012128	-	100	83.516	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017215	Gm27029	75	67.347	ENSSFOG00015008880	aarsd1	96	67.347	Scleropages_formosus
MGP_CAROLIEiJ_G0017215	Gm27029	74	66.154	ENSSMAG00000011081	aarsd1	94	66.154	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.750	ENSSDUG00000003913	aarsd1	97	65.750	Seriola_dumerili
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.500	ENSSLDG00000001645	aarsd1	97	65.500	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017215	Gm27029	76	72.525	ENSSPUG00000004592	-	97	72.525	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	66.250	ENSSPAG00000018029	aarsd1	97	66.250	Stegastes_partitus
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.250	ENSSSCG00000037979	-	97	91.250	Sus_scrofa
MGP_CAROLIEiJ_G0017215	Gm27029	75	73.990	ENSTGUG00000002837	-	99	73.990	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017215	Gm27029	76	65.000	ENSTRUG00000016572	aarsd1	97	65.000	Takifugu_rubripes
MGP_CAROLIEiJ_G0017215	Gm27029	100	58.034	ENSTNIG00000012859	aarsd1	100	58.034	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017215	Gm27029	54	79.433	ENSTBEG00000001124	-	100	78.723	Tupaia_belangeri
MGP_CAROLIEiJ_G0017215	Gm27029	94	91.278	ENSTTRG00000011737	-	100	91.278	Tursiops_truncatus
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.000	ENSUAMG00000013129	-	97	91.000	Ursus_americanus
MGP_CAROLIEiJ_G0017215	Gm27029	76	90.750	ENSUMAG00000025067	-	97	90.750	Ursus_maritimus
MGP_CAROLIEiJ_G0017215	Gm27029	87	91.489	ENSVPAG00000002571	-	87	91.489	Vicugna_pacos
MGP_CAROLIEiJ_G0017215	Gm27029	76	91.500	ENSVVUG00000023939	-	97	91.500	Vulpes_vulpes
MGP_CAROLIEiJ_G0017215	Gm27029	75	61.682	ENSXETG00000013644	aarsd1	96	61.538	Xenopus_tropicalis
MGP_CAROLIEiJ_G0017215	Gm27029	76	62.594	ENSXCOG00000017893	aarsd1	97	62.500	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0017215	Gm27029	76	64.000	ENSXMAG00000016266	aarsd1	97	64.000	Xiphophorus_maculatus