EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017226 (Gene tree)
Gene ID: 110305276
Gene Symbol: Rdm1
Alias: 2410008M22Rik|Rad52b
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 7339 bases
Position: chr11:97566205-97573543
Accession: 110305276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0030107	RRM_1	PF00076.22	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0030108	-	818	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030109	-	986	-	MGP_CAROLIEiJ_P0030109	126 (aa)	-	-
MGP_CAROLIEiJ_T0030110	-	463	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030106	-	435	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030107	-	1125	XM_021177177	MGP_CAROLIEiJ_P0030107	281 (aa)	XP_021032836	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.085	ENSG00000278023	RDM1	97	82.707	Homo_sapiens
MGP_CAROLIEiJ_G0017226	Rdm1	80	33.476	ENSAPOG00000021886	zgc:103564	84	33.476	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017226	Rdm1	88	33.992	ENSAPEG00000008929	zgc:103564	92	34.263	Amphiprion_percula
MGP_CAROLIEiJ_G0017226	Rdm1	90	51.362	ENSAPLG00000004384	RDM1	98	50.973	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017226	Rdm1	97	46.429	ENSACAG00000012989	-	100	46.429	Anolis_carolinensis
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.438	ENSANAG00000032752	RDM1	96	81.955	Aotus_nancymaae
MGP_CAROLIEiJ_G0017226	Rdm1	99	71.127	ENSBTAG00000000030	RDM1	99	71.127	Bos_taurus
MGP_CAROLIEiJ_G0017226	Rdm1	89	75.397	ENSCJAG00000015031	RDM1	96	84.211	Callithrix_jacchus
MGP_CAROLIEiJ_G0017226	Rdm1	88	65.625	ENSCAFG00000015160	-	99	65.490	Canis_familiaris
MGP_CAROLIEiJ_G0017226	Rdm1	99	71.886	ENSCHIG00000020607	RDM1	99	71.886	Capra_hircus
MGP_CAROLIEiJ_G0017226	Rdm1	99	68.085	ENSCPOG00000001495	-	98	68.085	Cavia_porcellus
MGP_CAROLIEiJ_G0017226	Rdm1	96	72.426	ENSCCAG00000035763	RDM1	96	82.707	Cebus_capucinus
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	ENSCATG00000044451	RDM1	96	84.211	Cercocebus_atys
MGP_CAROLIEiJ_G0017226	Rdm1	93	72.075	ENSCSAG00000006209	RDM1	99	72.075	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017226	Rdm1	80	51.528	ENSCPBG00000009105	RDM1	97	50.196	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.792	ENSCANG00000041322	RDM1	95	80.870	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017226	Rdm1	96	83.643	ENSCGRG00001015927	Rdm1	99	83.214	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017226	Rdm1	89	33.597	ENSCVAG00000001956	zgc:103564	89	33.740	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0017226	Rdm1	87	75.806	ENSDNOG00000045224	-	92	75.806	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017226	Rdm1	70	70.588	ENSEASG00005010554	RDM1	71	70.588	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017226	Rdm1	89	72.941	ENSECAG00000022182	RDM1	90	72.727	Equus_caballus
MGP_CAROLIEiJ_G0017226	Rdm1	87	70.445	ENSEEUG00000006127	RDM1	98	70.445	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017226	Rdm1	80	75.330	ENSFCAG00000043429	RDM1	96	84.211	Felis_catus
MGP_CAROLIEiJ_G0017226	Rdm1	97	52.920	ENSGALG00000000243	RDM1	97	52.920	Gallus_gallus
MGP_CAROLIEiJ_G0017226	Rdm1	90	50.769	ENSGAGG00000000293	-	82	51.154	Gopherus_agassizii
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.792	ENSGGOG00000010584	RDM1	96	82.707	Gorilla_gorilla
MGP_CAROLIEiJ_G0017226	Rdm1	98	33.574	ENSHCOG00000002518	-	89	35.341	Hippocampus_comes
MGP_CAROLIEiJ_G0017226	Rdm1	98	73.835	ENSSTOG00000022491	RDM1	98	73.835	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017226	Rdm1	99	70.213	ENSLAFG00000029300	RDM1	99	70.213	Loxodonta_africana
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.498	ENSMFAG00000032968	RDM1	96	84.211	Macaca_fascicularis
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	ENSMMUG00000006847	RDM1	95	81.739	Macaca_mulatta
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.498	ENSMNEG00000039977	RDM1	96	84.211	Macaca_nemestrina
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	ENSMLEG00000041158	RDM1	95	81.739	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017226	Rdm1	91	50.781	ENSMGAG00000008774	RDM1	96	52.893	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017226	Rdm1	100	83.986	ENSMAUG00000018559	Rdm1	100	83.986	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017226	Rdm1	99	74.558	ENSMICG00000038651	RDM1	99	74.558	Microcebus_murinus
MGP_CAROLIEiJ_G0017226	Rdm1	97	79.121	ENSMOCG00000015095	Rdm1	99	78.388	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017226	Rdm1	97	61.232	ENSMODG00000011101	RDM1	100	61.232	Monodelphis_domestica
MGP_CAROLIEiJ_G0017226	Rdm1	100	95.730	ENSMUSG00000010362	Rdm1	100	95.730	Mus_musculus
MGP_CAROLIEiJ_G0017226	Rdm1	100	93.950	MGP_PahariEiJ_G0018356	Rdm1	100	93.950	Mus_pahari
MGP_CAROLIEiJ_G0017226	Rdm1	100	96.441	MGP_SPRETEiJ_G0018069	Rdm1	100	96.441	Mus_spretus
MGP_CAROLIEiJ_G0017226	Rdm1	98	75.801	ENSMPUG00000008363	RDM1	98	75.801	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	ENSNLEG00000014173	RDM1	91	84.259	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017226	Rdm1	88	60.956	ENSMEUG00000015826	RDM1	98	61.633	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017226	Rdm1	91	70.000	ENSOCUG00000022704	RDM1	97	70.916	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017226	Rdm1	100	72.183	ENSOGAG00000011332	RDM1	100	72.183	Otolemur_garnettii
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.145	ENSPPAG00000029969	RDM1	99	73.145	Pan_paniscus
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.498	ENSPTRG00000009031	RDM1	96	83.459	Pan_troglodytes
MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	ENSPANG00000022933	RDM1	96	84.211	Papio_anubis
MGP_CAROLIEiJ_G0017226	Rdm1	96	83.271	ENSPEMG00000018985	Rdm1	100	82.206	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.085	ENSPPYG00000008198	RDM1	99	72.085	Pongo_abelii
MGP_CAROLIEiJ_G0017226	Rdm1	99	71.378	ENSPCOG00000017995	RDM1	96	79.699	Propithecus_coquereli
MGP_CAROLIEiJ_G0017226	Rdm1	88	73.307	ENSPVAG00000001116	RDM1	99	73.200	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017226	Rdm1	100	92.883	ENSRNOG00000020751	Rdm1	100	92.883	Rattus_norvegicus
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.438	ENSRBIG00000030000	RDM1	96	84.211	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017226	Rdm1	99	72.792	ENSRROG00000035242	RDM1	95	81.739	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017226	Rdm1	97	64.130	ENSSHAG00000013584	RDM1	100	64.130	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017226	Rdm1	91	50.570	ENSSPUG00000010941	RDM1	89	50.598	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017226	Rdm1	90	32.685	ENSSPAG00000011690	-	86	33.613	Stegastes_partitus
MGP_CAROLIEiJ_G0017226	Rdm1	87	61.475	ENSSSCG00000017574	-	93	66.063	Sus_scrofa
MGP_CAROLIEiJ_G0017226	Rdm1	86	59.016	ENSTBEG00000010030	RDM1	97	59.016	Tupaia_belangeri
MGP_CAROLIEiJ_G0017226	Rdm1	98	77.061	ENSUAMG00000027279	RDM1	98	77.061	Ursus_americanus
MGP_CAROLIEiJ_G0017226	Rdm1	98	77.061	ENSUMAG00000015423	RDM1	96	77.061	Ursus_maritimus