EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017255 (Gene tree)
Gene ID: 110305290
Gene Symbol: Gpatch8
Alias: 5430405G24Rik|ENSMUSG00000075516|Fbm1|Gpatc8
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 78410 bases
Position: chr11:98430284-98508693
Accession: 110305290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0030278	zf-C2H2_jaz	PF12171.8	4.7e-06	1	1
MGP_CAROLIEiJ_P0030278	G-patch	PF01585.23	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0030283	-	896	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030282	-	452	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030281	-	387	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030280	-	389	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030278	-	7063	-	MGP_CAROLIEiJ_P0030278	1504 (aa)	XP_021032860	UPI000A31B02E
MGP_CAROLIEiJ_T0030279	-	5603	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.418	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0017255	Gpatch8	99	88.278	ENSAMEG00000018376	GPATCH8	99	89.007	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017255	Gpatch8	54	62.319	ENSAPLG00000003095	GPATCH8	55	62.321	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.889	ENSANAG00000032773	GPATCH8	100	89.153	Aotus_nancymaae
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.771	ENSBTAG00000038316	GPATCH8	100	89.102	Bos_taurus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.492	ENSCJAG00000009807	GPATCH8	100	88.757	Callithrix_jacchus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.492	ENSCAFG00000014136	GPATCH8	100	89.220	Canis_familiaris
MGP_CAROLIEiJ_G0017255	Gpatch8	99	88.392	ENSCAFG00020009830	GPATCH8	99	89.126	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017255	Gpatch8	99	87.649	ENSCHIG00000008962	GPATCH8	99	88.541	Capra_hircus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	82.322	ENSTSYG00000033153	GPATCH8	100	82.660	Carlito_syrichta
MGP_CAROLIEiJ_G0017255	Gpatch8	99	76.056	ENSCPOG00000039068	GPATCH8	53	68.137	Cavia_porcellus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.095	ENSCCAG00000030686	GPATCH8	100	88.955	Cebus_capucinus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.616	ENSCATG00000028156	GPATCH8	100	89.881	Cercocebus_atys
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.352	ENSCSAG00000003586	GPATCH8	100	89.616	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	67.778	ENSCPBG00000008955	GPATCH8	52	63.204	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.294	ENSCANG00000039731	GPATCH8	100	89.153	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	92.236	ENSCGRG00001020210	Gpatch8	100	90.445	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017255	Gpatch8	100	92.236	ENSCGRG00000017090	Gpatch8	100	90.445	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017255	Gpatch8	100	87.955	ENSDNOG00000005102	GPATCH8	100	87.293	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.815	ENSDORG00000027664	Gpatch8	100	89.550	Dipodomys_ordii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	83.366	ENSETEG00000001325	GPATCH8	100	83.499	Echinops_telfairi
MGP_CAROLIEiJ_G0017255	Gpatch8	67	47.403	ENSEBUG00000005749	gpatch8	70	48.590	Eptatretus_burgeri
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.742	ENSEASG00005010264	GPATCH8	92	89.536	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.675	ENSECAG00000040232	GPATCH8	99	89.470	Equus_caballus
MGP_CAROLIEiJ_G0017255	Gpatch8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017255	Gpatch8	55	86.627	ENSFCAG00000043334	GPATCH8	56	86.364	Felis_catus
MGP_CAROLIEiJ_G0017255	Gpatch8	99	65.680	ENSFALG00000009554	GPATCH8	55	61.151	Ficedula_albicollis
MGP_CAROLIEiJ_G0017255	Gpatch8	100	66.776	ENSGAGG00000008358	GPATCH8	53	63.217	Gopherus_agassizii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	86.310	ENSGGOG00000013860	GPATCH8	100	87.434	Gorilla_gorilla
MGP_CAROLIEiJ_G0017255	Gpatch8	100	74.191	ENSHGLG00000017687	GPATCH8	53	69.825	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017255	Gpatch8	74	78.061	ENSHGLG00100010738	GPATCH8	97	78.061	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.345	ENSSTOG00000025022	GPATCH8	100	89.080	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.352	ENSJJAG00000017797	Gpatch8	100	87.756	Jaculus_jaculus
MGP_CAROLIEiJ_G0017255	Gpatch8	85	86.484	ENSLAFG00000032250	GPATCH8	100	86.250	Loxodonta_africana
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.616	ENSMFAG00000039126	GPATCH8	100	89.881	Macaca_fascicularis
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.616	ENSMMUG00000012658	GPATCH8	100	89.881	Macaca_mulatta
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.550	ENSMNEG00000031426	GPATCH8	100	89.815	Macaca_nemestrina
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.616	ENSMLEG00000038860	GPATCH8	100	89.881	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	93.028	ENSMAUG00000021770	Gpatch8	100	91.235	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.286	ENSMICG00000028586	GPATCH8	100	87.359	Microcebus_murinus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	92.109	ENSMOCG00000001658	Gpatch8	100	91.844	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017255	Gpatch8	100	98.340	ENSMUSG00000034621	Gpatch8	100	98.340	Mus_musculus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	96.821	MGP_PahariEiJ_G0018385	Gpatch8	100	96.821	Mus_pahari
MGP_CAROLIEiJ_G0017255	Gpatch8	100	97.815	MGP_SPRETEiJ_G0018098	Gpatch8	100	97.815	Mus_spretus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	87.963	ENSMPUG00000009274	GPATCH8	100	88.492	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017255	Gpatch8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.270	Myotis_lucifugus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	91.120	ENSNGAG00000021860	Gpatch8	100	90.391	Nannospalax_galili
MGP_CAROLIEiJ_G0017255	Gpatch8	78	75.678	ENSMEUG00000011799	GPATCH8	100	75.063	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	79.365	ENSOPRG00000008816	GPATCH8	95	89.871	Ochotona_princeps
MGP_CAROLIEiJ_G0017255	Gpatch8	100	87.095	ENSOCUG00000003291	GPATCH8	100	87.359	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017255	Gpatch8	97	88.103	ENSOGAG00000033643	GPATCH8	100	87.152	Otolemur_garnettii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	82.563	ENSOARG00000008370	GPATCH8	100	84.412	Ovis_aries
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.087	ENSPPAG00000040523	GPATCH8	100	89.087	Pan_paniscus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.426	ENSPPRG00000023310	GPATCH8	100	89.153	Panthera_pardus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	86.640	ENSPTIG00000020001	GPATCH8	100	87.169	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.153	ENSPTRG00000009278	GPATCH8	100	89.153	Pan_troglodytes
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.550	ENSPANG00000021304	GPATCH8	100	89.550	Papio_anubis
MGP_CAROLIEiJ_G0017255	Gpatch8	100	92.961	ENSPEMG00000008337	Gpatch8	100	92.563	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.690	ENSPPYG00000008329	GPATCH8	100	88.955	Pongo_abelii
MGP_CAROLIEiJ_G0017255	Gpatch8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
MGP_CAROLIEiJ_G0017255	Gpatch8	100	87.095	ENSPCOG00000019209	GPATCH8	100	85.506	Propithecus_coquereli
MGP_CAROLIEiJ_G0017255	Gpatch8	100	87.235	ENSPVAG00000003155	GPATCH8	100	87.963	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	93.865	ENSRNOG00000021044	Gpatch8	100	92.480	Rattus_norvegicus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.624	ENSRBIG00000033713	GPATCH8	100	89.484	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.624	ENSRROG00000029623	GPATCH8	100	89.484	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.294	ENSSBOG00000023544	GPATCH8	100	89.153	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017255	Gpatch8	100	84.656	ENSSARG00000007516	GPATCH8	100	84.106	Sorex_araneus
MGP_CAROLIEiJ_G0017255	Gpatch8	100	89.352	ENSSSCG00000017357	ITGA2B	100	89.121	Sus_scrofa
MGP_CAROLIEiJ_G0017255	Gpatch8	91	95.950	ENSTBEG00000009486	GPATCH8	91	95.950	Tupaia_belangeri
MGP_CAROLIEiJ_G0017255	Gpatch8	99	84.579	ENSTTRG00000010527	GPATCH8	100	84.579	Tursiops_truncatus
MGP_CAROLIEiJ_G0017255	Gpatch8	95	85.425	ENSUMAG00000013891	GPATCH8	100	86.123	Ursus_maritimus
MGP_CAROLIEiJ_G0017255	Gpatch8	90	87.445	ENSVPAG00000006937	GPATCH8	99	87.299	Vicugna_pacos
MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.492	ENSVVUG00000017996	GPATCH8	100	89.153	Vulpes_vulpes