EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0017263 (Gene tree)
Gene ID
110304296
Gene Symbol
Eftud2
Alias
116kDa|Snrp116|U5-116kD
Full Name
elongation factor Tu GTP binding domain containing 2
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
40513 bases
Position
chr11:98807515-98848027
Accession
110304296
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0030313GTP_EFTUPF00009.275.8e-4511
MGP_CAROLIEiJ_P0030314GTP_EFTUPF00009.275.8e-4511
MGP_CAROLIEiJ_P0030316GTP_EFTUPF00009.272.1e-3711
MGP_CAROLIEiJ_P0030316GTP_EFTU_D2PF03144.251.7e-1211
MGP_CAROLIEiJ_P0030313GTP_EFTU_D2PF03144.251.7e-1211
MGP_CAROLIEiJ_P0030314GTP_EFTU_D2PF03144.251.7e-1211
MGP_CAROLIEiJ_P0030316EFG_IVPF03764.184e-2311
MGP_CAROLIEiJ_P0030313EFG_IVPF03764.184.1e-2311
MGP_CAROLIEiJ_P0030314EFG_IVPF03764.184.1e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0030319-934--- (aa)--
MGP_CAROLIEiJ_T0030318-631--- (aa)--
MGP_CAROLIEiJ_T0030313-3324XM_021175570MGP_CAROLIEiJ_P0030313972 (aa)XP_021031229UPI0000021A7B
MGP_CAROLIEiJ_T0030315-397-MGP_CAROLIEiJ_P003031598 (aa)--
MGP_CAROLIEiJ_T0030314-3342XM_021175569MGP_CAROLIEiJ_P0030314972 (aa)XP_021031228UPI0000021A7B
MGP_CAROLIEiJ_T0030317-567-MGP_CAROLIEiJ_P003031784 (aa)--
MGP_CAROLIEiJ_T0030316-2889-MGP_CAROLIEiJ_P0030316962 (aa)-UPI00021CF4FE
MGP_CAROLIEiJ_T0030324-578--- (aa)--
MGP_CAROLIEiJ_T0030325-787--- (aa)--
MGP_CAROLIEiJ_T0030320-605--- (aa)--
MGP_CAROLIEiJ_T0030321-679-MGP_CAROLIEiJ_P003032130 (aa)--
MGP_CAROLIEiJ_T0030322-1379--- (aa)--
MGP_CAROLIEiJ_T0030323-3015--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0017263's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017263's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0017263Eftud29048.052MGP_CAROLIEiJ_G0015622Eef29939.061
MGP_CAROLIEiJ_G0017263Eftud27333.803MGP_CAROLIEiJ_G0029936Efl17038.728
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSG00000108883EFTUD2100100.000Homo_sapiens
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSAPOG00000002433eftud210091.975Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSAMEG00000018390EFTUD210099.280Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017263Eftud210088.580ENSACIG00000009096eftud210088.477Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017263Eftud28788.235ENSAOCG00000023385eftud210088.235Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017263Eftud210092.181ENSAPEG00000003321eftud210092.078Amphiprion_percula
MGP_CAROLIEiJ_G0017263Eftud210092.490ENSATEG00000000457eftud210092.387Anabas_testudineus
MGP_CAROLIEiJ_G0017263Eftud29993.821ENSAPLG00000011036EFTUD29993.821Anas_platyrhynchos
MGP_CAROLIEiJ_G0017263Eftud210097.119ENSACAG00000007637EFTUD210097.119Anolis_carolinensis
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSANAG00000025320EFTUD210099.280Aotus_nancymaae
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSACLG00000001296eftud210091.975Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017263Eftud210091.607ENSAMXG00000000568eftud210091.505Astyanax_mexicanus
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSBTAG00000013526EFTUD210099.383Bos_taurus
MGP_CAROLIEiJ_G0017263Eftud29970.248WBGene00001166eftu-29969.835Caenorhabditis_elegans
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCJAG00000012349EFTUD210099.280Callithrix_jacchus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCAFG00000014065EFTUD210099.280Canis_familiaris
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCAFG00020009633EFTUD210099.280Canis_lupus_dingo
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSCHIG00000011603EFTUD210099.383Capra_hircus
MGP_CAROLIEiJ_G0017263Eftud210099.074ENSTSYG00000013172EFTUD210099.074Carlito_syrichta
MGP_CAROLIEiJ_G0017263Eftud210098.868ENSCAPG00000014639EFTUD210098.868Cavia_aperea
MGP_CAROLIEiJ_G0017263Eftud210098.868ENSCPOG00000010566EFTUD210098.868Cavia_porcellus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCCAG00000035302EFTUD210099.280Cebus_capucinus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCATG00000035809EFTUD210099.280Cercocebus_atys
MGP_CAROLIEiJ_G0017263Eftud210098.765ENSCLAG00000014733EFTUD210098.765Chinchilla_lanigera
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCSAG00000003614EFTUD210099.280Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017263Eftud29186.712ENSCHOG00000010031EFTUD29986.712Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017263Eftud210097.942ENSCPBG00000008904EFTUD210097.942Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017263Eftud210077.812ENSCING00000009372-10077.744Ciona_intestinalis
MGP_CAROLIEiJ_G0017263Eftud29977.800ENSCSAVG00000004985-9979.717Ciona_savignyi
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSCANG00000026557EFTUD210099.280Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017263Eftud210099.794ENSCGRG00001009904Eftud210099.794Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017263Eftud210099.794ENSCGRG00000003825Eftud210099.794Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017263Eftud210091.461ENSCSEG00000016775eftud210091.358Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSCVAG00000012537eftud210092.284Cyprinodon_variegatus
MGP_CAROLIEiJ_G0017263Eftud210091.059ENSDARG00000012261eftud210091.059Danio_rerio
MGP_CAROLIEiJ_G0017263Eftud210098.663ENSDNOG00000008033EFTUD210098.663Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSDORG00000011566Eftud210099.280Dipodomys_ordii
MGP_CAROLIEiJ_G0017263Eftud210075.385FBgn0039566CG484910074.769Drosophila_melanogaster
MGP_CAROLIEiJ_G0017263Eftud29299.457ENSETEG00000005678EFTUD29299.457Echinops_telfairi
MGP_CAROLIEiJ_G0017263Eftud29577.778ENSEBUG00000004047-9686.926Eptatretus_burgeri
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSEASG00005010321EFTUD210099.280Equus_asinus_asinus
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSECAG00000019363EFTUD29399.177Equus_caballus
MGP_CAROLIEiJ_G0017263Eftud283100.000ENSEEUG00000011128EFTUD292100.000Erinaceus_europaeus
MGP_CAROLIEiJ_G0017263Eftud210090.741ENSELUG00000017169eftud210090.947Esox_lucius
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSFCAG00000005466EFTUD210099.177Felis_catus
MGP_CAROLIEiJ_G0017263Eftud210097.531ENSFALG00000007551EFTUD210097.531Ficedula_albicollis
MGP_CAROLIEiJ_G0017263Eftud210099.486ENSFDAG00000013143EFTUD210099.486Fukomys_damarensis
MGP_CAROLIEiJ_G0017263Eftud210092.181ENSFHEG00000013479eftud210092.387Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017263Eftud210090.844ENSGMOG00000014277eftud210091.667Gadus_morhua
MGP_CAROLIEiJ_G0017263Eftud210097.428ENSGALG00000000988EFTUD210098.276Gallus_gallus
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSGAFG00000002263eftud210092.181Gambusia_affinis
MGP_CAROLIEiJ_G0017263Eftud210091.358ENSGACG00000009163eftud210091.461Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSGGOG00000012999EFTUD210099.280Gorilla_gorilla
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSHBUG00000023546eftud210091.872Haplochromis_burtoni
MGP_CAROLIEiJ_G0017263Eftud210099.074ENSHGLG00000014497EFTUD210099.074Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017263Eftud210099.074ENSHGLG00100013432EFTUD210099.074Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017263Eftud210090.535ENSHCOG00000017689eftud210090.535Hippocampus_comes
MGP_CAROLIEiJ_G0017263Eftud210091.667ENSIPUG00000023182Eftud210091.872Ictalurus_punctatus
MGP_CAROLIEiJ_G0017263Eftud210093.519ENSSTOG00000012188EFTUD210093.416Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017263Eftud29699.573ENSJJAG00000018268Eftud210099.573Jaculus_jaculus
MGP_CAROLIEiJ_G0017263Eftud210091.564ENSKMAG00000021027eftud210091.667Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017263Eftud29591.154ENSLBEG00000005875eftud210092.588Labrus_bergylta
MGP_CAROLIEiJ_G0017263Eftud210093.724ENSLACG00000012918EFTUD210094.245Latimeria_chalumnae
MGP_CAROLIEiJ_G0017263Eftud210092.181ENSLOCG00000011460eftud210092.181Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSLAFG00000015344EFTUD29999.177Loxodonta_africana
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMFAG00000042655EFTUD210099.280Macaca_fascicularis
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMMUG00000013118EFTUD2100100.000Macaca_mulatta
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMNEG00000037895EFTUD210099.280Macaca_nemestrina
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMLEG00000032960EFTUD210099.280Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017263Eftud210092.490ENSMAMG00000022190eftud210092.387Mastacembelus_armatus
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSMZEG00005022885eftud210091.975Maylandia_zebra
MGP_CAROLIEiJ_G0017263Eftud210097.433ENSMGAG00000010083EFTUD29997.433Meleagris_gallopavo
MGP_CAROLIEiJ_G0017263Eftud210099.588ENSMAUG00000021178Eftud210099.588Mesocricetus_auratus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMICG00000016592EFTUD210099.280Microcebus_murinus
MGP_CAROLIEiJ_G0017263Eftud210099.691ENSMOCG00000009039-10099.691Microtus_ochrogaster
MGP_CAROLIEiJ_G0017263Eftud29281.798ENSMOCG00000017653-9082.159Microtus_ochrogaster
MGP_CAROLIEiJ_G0017263Eftud28794.000ENSMMOG00000020811eftud210094.000Mola_mola
MGP_CAROLIEiJ_G0017263Eftud210098.971ENSMODG00000011347EFTUD210098.971Monodelphis_domestica
MGP_CAROLIEiJ_G0017263Eftud28792.235ENSMALG00000014501eftud210092.235Monopterus_albus
MGP_CAROLIEiJ_G0017263Eftud2100100.000ENSMUSG00000020929Eftud2100100.000Mus_musculus
MGP_CAROLIEiJ_G0017263Eftud2100100.000MGP_PahariEiJ_G0018393Eftud2100100.000Mus_pahari
MGP_CAROLIEiJ_G0017263Eftud2100100.000MGP_SPRETEiJ_G0018106Eftud2100100.000Mus_spretus
MGP_CAROLIEiJ_G0017263Eftud29799.258ENSMPUG00000009136EFTUD29099.258Mustela_putorius_furo
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSMLUG00000012164EFTUD29999.280Myotis_lucifugus
MGP_CAROLIEiJ_G0017263Eftud210099.588ENSNGAG00000017834Eftud210099.588Nannospalax_galili
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSNBRG00000020081eftud210091.872Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017263Eftud29797.450ENSNLEG00000005210EFTUD29697.450Nomascus_leucogenys
MGP_CAROLIEiJ_G0017263Eftud210095.267ENSMEUG00000015620EFTUD210095.267Notamacropus_eugenii
MGP_CAROLIEiJ_G0017263Eftud210091.049ENSOPRG00000016323EFTUD210091.049Ochotona_princeps
MGP_CAROLIEiJ_G0017263Eftud210098.765ENSODEG00000018041-10098.765Octodon_degus
MGP_CAROLIEiJ_G0017263Eftud29379.598ENSODEG00000003385-10079.598Octodon_degus
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSONIG00000000912eftud210091.975Oreochromis_niloticus
MGP_CAROLIEiJ_G0017263Eftud210099.486ENSOCUG00000006879EFTUD210099.486Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017263Eftud210091.564ENSORLG00000003109eftud210091.564Oryzias_latipes
MGP_CAROLIEiJ_G0017263Eftud210091.667ENSORLG00020009865eftud210091.667Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017263Eftud210091.667ENSORLG00015002611eftud210093.682Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017263Eftud26870.690ENSOMEG00000021902-8096.748Oryzias_melastigma
MGP_CAROLIEiJ_G0017263Eftud210097.016ENSOGAG00000012918EFTUD210097.016Otolemur_garnettii
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSOARG00000009078EFTUD29799.383Ovis_aries
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSPPAG00000029450EFTUD210099.383Pan_paniscus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSPPRG00000010981EFTUD210099.280Panthera_pardus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSPTIG00000007703EFTUD210099.280Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017263Eftud210099.383ENSPTRG00000009287EFTUD210099.383Pan_troglodytes
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSPANG00000021284EFTUD210099.280Papio_anubis
MGP_CAROLIEiJ_G0017263Eftud29396.582ENSPSIG00000004505EFTUD29996.582Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017263Eftud210083.642ENSPMGG00000007281eftud210084.465Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0017263Eftud210099.794ENSPEMG00000005129Eftud210099.794Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017263Eftud210098.971ENSPCIG00000015027EFTUD210098.971Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSPFOG00000008515eftud210092.181Poecilia_formosa
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSPLAG00000010393eftud210092.181Poecilia_latipinna
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSPMEG00000005087eftud210092.181Poecilia_mexicana
MGP_CAROLIEiJ_G0017263Eftud26870.690ENSPREG00000008431-8491.824Poecilia_reticulata
MGP_CAROLIEiJ_G0017263Eftud210097.840ENSPPYG00000008320EFTUD210097.840Pongo_abelii
MGP_CAROLIEiJ_G0017263Eftud210094.959ENSPCAG00000000812EFTUD210094.959Procavia_capensis
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSPCOG00000020029EFTUD210099.177Propithecus_coquereli
MGP_CAROLIEiJ_G0017263Eftud210094.547ENSPVAG00000016155EFTUD210094.547Pteropus_vampyrus
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSPNYG00000012448eftud210091.872Pundamilia_nyererei
MGP_CAROLIEiJ_G0017263Eftud210092.078ENSPNAG00000012490eftud210092.181Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017263Eftud210099.794ENSRNOG00000002818Eftud210099.794Rattus_norvegicus
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSRBIG00000043255EFTUD210099.177Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017263Eftud210099.177ENSRROG00000042925EFTUD210099.177Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017263Eftud29733.962YKL173WSNU1149733.664Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSSBOG00000021892EFTUD210099.280Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017263Eftud29798.934ENSSHAG00000008134EFTUD210098.934Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017263Eftud210091.358ENSSFOG00015023272eftud210091.358Scleropages_formosus
MGP_CAROLIEiJ_G0017263Eftud210091.461ENSSMAG00000010174eftud210091.358Scophthalmus_maximus
MGP_CAROLIEiJ_G0017263Eftud210092.181ENSSDUG00000022675eftud210092.078Seriola_dumerili
MGP_CAROLIEiJ_G0017263Eftud210092.284ENSSLDG00000001595eftud210092.181Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017263Eftud210090.844ENSSARG00000008664EFTUD210090.844Sorex_araneus
MGP_CAROLIEiJ_G0017263Eftud210097.016ENSSPUG00000010249EFTUD210097.016Sphenodon_punctatus
MGP_CAROLIEiJ_G0017263Eftud210092.284ENSSPAG00000016235eftud29992.181Stegastes_partitus
MGP_CAROLIEiJ_G0017263Eftud210099.074ENSSSCG00000017346EFTUD210099.074Sus_scrofa
MGP_CAROLIEiJ_G0017263Eftud28496.837ENSTGUG00000002065EFTUD210096.837Taeniopygia_guttata
MGP_CAROLIEiJ_G0017263Eftud210091.049ENSTRUG00000016422eftud210090.947Takifugu_rubripes
MGP_CAROLIEiJ_G0017263Eftud210086.997ENSTNIG00000005346eftud29986.894Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017263Eftud210093.621ENSTBEG00000011337EFTUD210093.621Tupaia_belangeri
MGP_CAROLIEiJ_G0017263Eftud210090.844ENSTTRG00000006230EFTUD210090.844Tursiops_truncatus
MGP_CAROLIEiJ_G0017263Eftud210098.152ENSUAMG00000000399EFTUD210098.152Ursus_americanus
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSUMAG00000014323EFTUD210099.280Ursus_maritimus
MGP_CAROLIEiJ_G0017263Eftud288100.000ENSVPAG00000002748EFTUD288100.000Vicugna_pacos
MGP_CAROLIEiJ_G0017263Eftud210099.280ENSVVUG00000018113EFTUD210099.280Vulpes_vulpes
MGP_CAROLIEiJ_G0017263Eftud29694.872ENSXETG00000003394eftud29895.756Xenopus_tropicalis
MGP_CAROLIEiJ_G0017263Eftud28193.367ENSXCOG00000017309eftud29693.367Xiphophorus_couchianus
MGP_CAROLIEiJ_G0017263Eftud210091.975ENSXMAG00000008494eftud210092.181Xiphophorus_maculatus

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