EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017337 (Gene tree)
Gene ID: 110305095
Gene Symbol: Helz
Alias: 3110078M01Rik|9430093I07Rik|9630002H22Rik
Full Name: helicase with zinc finger
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 146821 bases
Position: chr11:103460743-103607563
Accession: 110305095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0030638	zf-CCCH	PF00642.24	1.7e-07	1	1
MGP_CAROLIEiJ_P0030640	zf-CCCH	PF00642.24	2.3e-07	1	1
MGP_CAROLIEiJ_P0030639	zf-CCCH	PF00642.24	2.3e-07	1	1
MGP_CAROLIEiJ_P0030639	ResIII	PF04851.15	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0030638	-	6151	-	MGP_CAROLIEiJ_P0030638	1608 (aa)	-	-
MGP_CAROLIEiJ_T0030639	-	6194	XM_021176880	MGP_CAROLIEiJ_P0030639	1957 (aa)	XP_021032539	UPI000A31971C
MGP_CAROLIEiJ_T0030637	-	690	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030643	-	859	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030642	-	958	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0030641	-	3735	-	MGP_CAROLIEiJ_P0030641	927 (aa)	-	-
MGP_CAROLIEiJ_T0030640	-	13051	-	MGP_CAROLIEiJ_P0030640	1956 (aa)	XP_021032541	UPI000A31527A
MGP_CAROLIEiJ_T0030644	-	553	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017337	Helz	100	90.904	ENSG00000198265	HELZ	100	94.004	Homo_sapiens
MGP_CAROLIEiJ_G0017337	Helz	99	63.615	ENSAPOG00000001626	helz	100	58.400	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017337	Helz	99	91.149	ENSAMEG00000018396	HELZ	100	90.097	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017337	Helz	80	72.727	ENSAOCG00000018131	helz	88	73.241	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017337	Helz	99	64.431	ENSATEG00000007191	helz	100	58.381	Anabas_testudineus
MGP_CAROLIEiJ_G0017337	Helz	99	84.138	ENSAPLG00000007762	HELZ	100	81.846	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017337	Helz	99	81.160	ENSACAG00000000206	HELZ	100	79.533	Anolis_carolinensis
MGP_CAROLIEiJ_G0017337	Helz	100	90.542	ENSANAG00000037949	HELZ	100	90.389	Aotus_nancymaae
MGP_CAROLIEiJ_G0017337	Helz	99	61.307	ENSAMXG00000020742	helz	100	61.393	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017337	Helz	99	90.013	ENSBTAG00000004746	HELZ	100	88.611	Bos_taurus
MGP_CAROLIEiJ_G0017337	Helz	99	91.824	ENSCJAG00000032527	HELZ	100	90.644	Callithrix_jacchus
MGP_CAROLIEiJ_G0017337	Helz	99	91.332	ENSCAFG00000011422	HELZ	100	90.194	Canis_familiaris
MGP_CAROLIEiJ_G0017337	Helz	100	89.541	ENSCAFG00020026103	HELZ	100	89.490	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017337	Helz	99	88.442	ENSCHIG00000002760	HELZ	100	86.772	Capra_hircus
MGP_CAROLIEiJ_G0017337	Helz	92	93.750	ENSTSYG00000009414	HELZ	94	93.577	Carlito_syrichta
MGP_CAROLIEiJ_G0017337	Helz	83	79.600	ENSCAPG00000013940	HELZ	96	82.800	Cavia_aperea
MGP_CAROLIEiJ_G0017337	Helz	99	91.326	ENSCPOG00000014911	HELZ	98	90.633	Cavia_porcellus
MGP_CAROLIEiJ_G0017337	Helz	100	90.393	ENSCATG00000037268	HELZ	100	90.547	Cercocebus_atys
MGP_CAROLIEiJ_G0017337	Helz	99	91.138	ENSCLAG00000004638	HELZ	100	89.627	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017337	Helz	100	90.598	ENSCSAG00000004152	HELZ	100	90.751	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017337	Helz	99	84.191	ENSCPBG00000009548	HELZ	100	82.296	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017337	Helz	96	91.834	ENSCANG00000029169	HELZ	99	91.562	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017337	Helz	100	94.175	ENSCGRG00001015066	Helz	100	94.175	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017337	Helz	100	94.172	ENSCGRG00000012094	Helz	100	94.172	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017337	Helz	99	61.981	ENSCSEG00000012232	helz	100	57.730	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017337	Helz	99	65.363	ENSDARG00000030560	helz	100	60.612	Danio_rerio
MGP_CAROLIEiJ_G0017337	Helz	99	90.584	ENSDNOG00000007899	HELZ	100	89.331	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017337	Helz	62	96.360	ENSEASG00005015902	HELZ	95	96.360	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017337	Helz	99	91.206	ENSECAG00000010404	HELZ	100	90.046	Equus_caballus
MGP_CAROLIEiJ_G0017337	Helz	52	97.980	ENSEEUG00000010327	-	56	97.980	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017337	Helz	99	63.990	ENSELUG00000014335	helz	100	60.070	Esox_lucius
MGP_CAROLIEiJ_G0017337	Helz	100	89.576	ENSFCAG00000011711	HELZ	100	89.423	Felis_catus
MGP_CAROLIEiJ_G0017337	Helz	99	83.647	ENSFALG00000002404	HELZ	100	81.498	Ficedula_albicollis
MGP_CAROLIEiJ_G0017337	Helz	100	89.780	ENSFDAG00000008065	HELZ	99	91.709	Fukomys_damarensis
MGP_CAROLIEiJ_G0017337	Helz	99	63.794	ENSFHEG00000016609	helz	99	66.242	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017337	Helz	83	72.098	ENSGMOG00000009758	helz	97	69.386	Gadus_morhua
MGP_CAROLIEiJ_G0017337	Helz	94	84.854	ENSGALG00000027152	HELZ	99	82.215	Gallus_gallus
MGP_CAROLIEiJ_G0017337	Helz	86	69.411	ENSGACG00000018530	helz	96	69.021	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017337	Helz	76	81.187	ENSGAGG00000006506	-	99	83.080	Gopherus_agassizii
MGP_CAROLIEiJ_G0017337	Helz	100	90.751	ENSGGOG00000012312	HELZ	100	90.598	Gorilla_gorilla
MGP_CAROLIEiJ_G0017337	Helz	99	64.402	ENSHBUG00000015322	helz	100	58.540	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017337	Helz	97	94.904	ENSHGLG00000000732	HELZ	100	94.904	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017337	Helz	99	91.515	ENSHGLG00100002144	HELZ	100	90.700	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017337	Helz	99	63.369	ENSHCOG00000019617	helz	100	57.987	Hippocampus_comes
MGP_CAROLIEiJ_G0017337	Helz	100	90.956	ENSSTOG00000007818	HELZ	100	90.802	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017337	Helz	99	89.378	ENSJJAG00000019941	Helz	100	88.247	Jaculus_jaculus
MGP_CAROLIEiJ_G0017337	Helz	99	64.312	ENSKMAG00000017251	helz	100	57.800	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017337	Helz	99	72.409	ENSLACG00000010742	HELZ	100	69.508	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017337	Helz	99	70.361	ENSLOCG00000013617	helz	100	66.449	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017337	Helz	99	90.195	ENSLAFG00000003860	HELZ	100	88.917	Loxodonta_africana
MGP_CAROLIEiJ_G0017337	Helz	100	90.598	ENSMFAG00000045166	HELZ	100	90.751	Macaca_fascicularis
MGP_CAROLIEiJ_G0017337	Helz	100	90.598	ENSMMUG00000002959	HELZ	100	90.751	Macaca_mulatta
MGP_CAROLIEiJ_G0017337	Helz	100	90.496	ENSMNEG00000037121	HELZ	100	90.649	Macaca_nemestrina
MGP_CAROLIEiJ_G0017337	Helz	100	90.598	ENSMLEG00000039575	HELZ	100	90.751	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017337	Helz	99	64.489	ENSMAMG00000016108	helz	97	61.660	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017337	Helz	99	64.462	ENSMZEG00005001957	helz	100	58.512	Maylandia_zebra
MGP_CAROLIEiJ_G0017337	Helz	99	82.633	ENSMGAG00000007422	HELZ	100	81.030	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017337	Helz	100	92.508	ENSMAUG00000013803	Helz	100	92.304	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017337	Helz	99	92.018	ENSMICG00000013321	HELZ	100	91.160	Microcebus_murinus
MGP_CAROLIEiJ_G0017337	Helz	99	81.858	ENSMODG00000004034	HELZ	74	88.219	Monodelphis_domestica
MGP_CAROLIEiJ_G0017337	Helz	100	98.515	ENSMUSG00000020721	Helz	100	98.515	Mus_musculus
MGP_CAROLIEiJ_G0017337	Helz	100	98.109	MGP_PahariEiJ_G0018467	Helz	100	98.109	Mus_pahari
MGP_CAROLIEiJ_G0017337	Helz	100	97.763	MGP_SPRETEiJ_G0018181	Helz	100	97.825	Mus_spretus
MGP_CAROLIEiJ_G0017337	Helz	99	89.384	ENSMPUG00000014672	HELZ	100	87.743	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017337	Helz	99	90.647	ENSMLUG00000000962	HELZ	100	89.331	Myotis_lucifugus
MGP_CAROLIEiJ_G0017337	Helz	100	90.904	ENSNGAG00000023219	Helz	100	91.109	Nannospalax_galili
MGP_CAROLIEiJ_G0017337	Helz	92	61.119	ENSNBRG00000003933	helz	96	61.371	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017337	Helz	100	90.240	ENSNLEG00000000218	HELZ	100	90.393	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017337	Helz	99	64.985	ENSONIG00000006486	helz	100	59.425	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017337	Helz	99	83.489	ENSOANG00000008056	HELZ	100	82.044	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017337	Helz	97	89.316	ENSOCUG00000008856	HELZ	100	89.263	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017337	Helz	99	64.140	ENSORLG00000013894	helz	100	58.285	Oryzias_latipes
MGP_CAROLIEiJ_G0017337	Helz	97	65.808	ENSORLG00020021251	helz	99	61.653	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017337	Helz	99	64.101	ENSORLG00015022086	helz	100	58.222	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017337	Helz	99	64.264	ENSOMEG00000008739	helz	99	58.700	Oryzias_melastigma
MGP_CAROLIEiJ_G0017337	Helz	100	90.389	ENSOGAG00000002482	HELZ	100	90.542	Otolemur_garnettii
MGP_CAROLIEiJ_G0017337	Helz	99	88.575	ENSOARG00000015884	HELZ	100	86.932	Ovis_aries
MGP_CAROLIEiJ_G0017337	Helz	100	90.853	ENSPPAG00000036899	HELZ	100	90.700	Pan_paniscus
MGP_CAROLIEiJ_G0017337	Helz	100	89.678	ENSPPRG00000024752	HELZ	100	89.525	Panthera_pardus
MGP_CAROLIEiJ_G0017337	Helz	100	89.167	ENSPTIG00000020571	HELZ	100	89.014	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017337	Helz	100	90.695	ENSPTRG00000009562	HELZ	100	90.542	Pan_troglodytes
MGP_CAROLIEiJ_G0017337	Helz	90	90.683	ENSPANG00000020569	HELZ	100	90.853	Papio_anubis
MGP_CAROLIEiJ_G0017337	Helz	99	68.421	ENSPKIG00000006157	helz	100	63.938	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017337	Helz	99	84.789	ENSPSIG00000005225	HELZ	100	82.524	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017337	Helz	96	62.571	ENSPMGG00000002314	helz	77	67.717	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0017337	Helz	99	65.479	ENSPFOG00000013386	helz	100	60.277	Poecilia_formosa
MGP_CAROLIEiJ_G0017337	Helz	99	64.324	ENSPLAG00000020664	helz	98	58.953	Poecilia_latipinna
MGP_CAROLIEiJ_G0017337	Helz	99	64.355	ENSPMEG00000011144	helz	100	59.337	Poecilia_mexicana
MGP_CAROLIEiJ_G0017337	Helz	99	64.329	ENSPREG00000000245	helz	100	59.167	Poecilia_reticulata
MGP_CAROLIEiJ_G0017337	Helz	80	93.521	ENSPPYG00000008564	-	100	89.019	Pongo_abelii
MGP_CAROLIEiJ_G0017337	Helz	95	90.159	ENSPCAG00000001731	HELZ	95	90.159	Procavia_capensis
MGP_CAROLIEiJ_G0017337	Helz	99	90.383	ENSPCOG00000016213	HELZ	100	89.423	Propithecus_coquereli
MGP_CAROLIEiJ_G0017337	Helz	99	64.462	ENSPNYG00000018395	helz	100	58.608	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017337	Helz	100	96.029	ENSRNOG00000003213	Helz	100	96.029	Rattus_norvegicus
MGP_CAROLIEiJ_G0017337	Helz	100	89.694	ENSRBIG00000026299	HELZ	100	90.836	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017337	Helz	100	90.547	ENSRROG00000038961	HELZ	100	90.700	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017337	Helz	99	91.572	ENSSBOG00000033082	HELZ	100	90.440	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017337	Helz	99	68.261	ENSSFOG00015005413	helz	100	63.303	Scleropages_formosus
MGP_CAROLIEiJ_G0017337	Helz	99	63.095	ENSSMAG00000018328	helz	96	61.163	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017337	Helz	99	64.170	ENSSDUG00000011381	helz	100	58.240	Seriola_dumerili
MGP_CAROLIEiJ_G0017337	Helz	99	64.354	ENSSLDG00000000611	helz	94	69.242	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017337	Helz	77	86.345	ENSSARG00000004508	HELZ	73	86.345	Sorex_araneus
MGP_CAROLIEiJ_G0017337	Helz	99	83.804	ENSSPUG00000011226	HELZ	100	81.879	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017337	Helz	99	63.647	ENSSPAG00000012867	helz	100	57.516	Stegastes_partitus
MGP_CAROLIEiJ_G0017337	Helz	99	91.520	ENSSSCG00000017272	HELZ	99	92.252	Sus_scrofa
MGP_CAROLIEiJ_G0017337	Helz	99	83.824	ENSTGUG00000004401	HELZ	100	81.591	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017337	Helz	99	63.028	ENSTRUG00000000488	helz	99	59.746	Takifugu_rubripes
MGP_CAROLIEiJ_G0017337	Helz	99	63.066	ENSTNIG00000014131	helz	100	58.867	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017337	Helz	80	96.489	ENSTBEG00000003140	HELZ	82	96.489	Tupaia_belangeri
MGP_CAROLIEiJ_G0017337	Helz	99	90.088	ENSTTRG00000016778	HELZ	100	89.082	Tursiops_truncatus
MGP_CAROLIEiJ_G0017337	Helz	99	91.143	ENSUAMG00000005560	HELZ	99	90.584	Ursus_americanus
MGP_CAROLIEiJ_G0017337	Helz	100	88.974	ENSUMAG00000018753	HELZ	99	92.350	Ursus_maritimus
MGP_CAROLIEiJ_G0017337	Helz	96	89.392	ENSVPAG00000001848	HELZ	100	89.392	Vicugna_pacos
MGP_CAROLIEiJ_G0017337	Helz	99	91.269	ENSVVUG00000006563	HELZ	100	90.148	Vulpes_vulpes
MGP_CAROLIEiJ_G0017337	Helz	99	76.976	ENSXETG00000015395	helz	100	73.232	Xenopus_tropicalis
MGP_CAROLIEiJ_G0017337	Helz	99	64.294	ENSXMAG00000006535	helz	100	58.714	Xiphophorus_maculatus