EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017427 (Gene tree)
Gene ID: 110304651
Gene Symbol: Unk
Alias: B230379M23Rik|Zc3h5
Full Name: unkempt family zinc finger
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 30220 bases
Position: chr11:111883229-111913448
Accession: 110304651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0031060	zf-CCCH	PF00642.24	0.00039	1	1
MGP_CAROLIEiJ_P0031059	zf-CCCH	PF00642.24	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0031060	-	3701	-	MGP_CAROLIEiJ_P0031060	797 (aa)	-	-
MGP_CAROLIEiJ_T0031061	-	471	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0031062	-	3697	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0031063	-	817	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0031064	-	726	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0031065	-	599	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0031059	-	3740	XM_021176103	MGP_CAROLIEiJ_P0031059	810 (aa)	XP_021031762	UPI000A31A86F

Gene Model

Click here to download MGP_CAROLIEiJ_G0017427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0017427	Unk	80	78.305	MGP_CAROLIEiJ_G0021225	Unkl	91	78.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSG00000132478	UNK	97	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0017427	Unk	98	95.702	ENSAMEG00000009769	UNK	89	95.702	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017427	Unk	96	57.541	ENSATEG00000004212	unk	94	57.921	Anabas_testudineus
MGP_CAROLIEiJ_G0017427	Unk	96	87.902	ENSAPLG00000014891	UNK	100	87.902	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017427	Unk	100	84.281	ENSACAG00000007303	UNK	98	85.130	Anolis_carolinensis
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSANAG00000017139	UNK	98	95.449	Aotus_nancymaae
MGP_CAROLIEiJ_G0017427	Unk	63	62.227	ENSAMXG00000031804	unk	56	62.818	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017427	Unk	98	95.070	ENSBTAG00000016287	UNK	98	95.070	Bos_taurus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSCJAG00000014056	UNK	98	95.449	Callithrix_jacchus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSCAFG00000004925	UNK	89	95.449	Canis_familiaris
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSCAFG00020004454	UNK	98	95.449	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017427	Unk	98	94.690	ENSCHIG00000015385	UNK	98	94.690	Capra_hircus
MGP_CAROLIEiJ_G0017427	Unk	98	95.196	ENSTSYG00000008096	UNK	98	95.196	Carlito_syrichta
MGP_CAROLIEiJ_G0017427	Unk	85	97.819	ENSCAPG00000008657	UNK	93	97.819	Cavia_aperea
MGP_CAROLIEiJ_G0017427	Unk	98	95.954	ENSCPOG00000012679	UNK	98	95.954	Cavia_porcellus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSCCAG00000031100	UNK	98	95.449	Cebus_capucinus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSCATG00000038041	UNK	98	95.449	Cercocebus_atys
MGP_CAROLIEiJ_G0017427	Unk	98	96.334	ENSCLAG00000008106	UNK	98	96.334	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017427	Unk	98	95.322	ENSCSAG00000004859	UNK	98	95.322	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017427	Unk	100	84.885	ENSCPBG00000028046	UNK	99	85.750	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017427	Unk	98	95.575	ENSCANG00000033795	UNK	98	95.575	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017427	Unk	100	97.654	ENSCGRG00001024874	Unk	100	97.654	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017427	Unk	100	97.284	ENSCGRG00000008631	Unk	100	97.284	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017427	Unk	96	58.323	ENSCSEG00000020209	unk	95	58.726	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017427	Unk	96	58.621	ENSDARG00000000935	unk	94	59.642	Danio_rerio
MGP_CAROLIEiJ_G0017427	Unk	98	94.058	ENSDNOG00000038145	UNK	86	94.058	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017427	Unk	100	96.420	ENSDORG00000008133	Unk	100	96.420	Dipodomys_ordii
MGP_CAROLIEiJ_G0017427	Unk	73	86.464	ENSETEG00000019640	UNK	97	86.464	Echinops_telfairi
MGP_CAROLIEiJ_G0017427	Unk	98	95.828	ENSEASG00005002430	UNK	98	95.828	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017427	Unk	98	95.702	ENSECAG00000024672	UNK	99	95.613	Equus_caballus
MGP_CAROLIEiJ_G0017427	Unk	85	100.000	ENSEEUG00000013779	UNK	85	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017427	Unk	96	56.375	ENSELUG00000023290	unk	95	58.333	Esox_lucius
MGP_CAROLIEiJ_G0017427	Unk	98	95.196	ENSFCAG00000005757	UNK	98	95.196	Felis_catus
MGP_CAROLIEiJ_G0017427	Unk	96	87.758	ENSFALG00000001035	UNK	94	87.758	Ficedula_albicollis
MGP_CAROLIEiJ_G0017427	Unk	98	94.697	ENSFDAG00000009316	UNK	98	94.697	Fukomys_damarensis
MGP_CAROLIEiJ_G0017427	Unk	83	73.795	ENSGMOG00000014314	unk	81	74.174	Gadus_morhua
MGP_CAROLIEiJ_G0017427	Unk	100	85.127	ENSGALG00000002278	UNK	98	86.121	Gallus_gallus
MGP_CAROLIEiJ_G0017427	Unk	100	84.885	ENSGAGG00000007411	UNK	98	85.874	Gopherus_agassizii
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSGGOG00000009203	UNK	98	95.449	Gorilla_gorilla
MGP_CAROLIEiJ_G0017427	Unk	100	96.790	ENSHGLG00000007512	UNK	100	96.790	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017427	Unk	100	96.790	ENSHGLG00100002318	UNK	100	96.790	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017427	Unk	96	56.290	ENSIPUG00000004291	UNK	94	58.679	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017427	Unk	91	95.277	ENSSTOG00000013344	UNK	97	95.020	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017427	Unk	100	96.790	ENSJJAG00000009816	Unk	100	96.790	Jaculus_jaculus
MGP_CAROLIEiJ_G0017427	Unk	100	71.829	ENSLACG00000014044	UNK	97	72.864	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017427	Unk	97	66.625	ENSLOCG00000011578	unk	95	66.208	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017427	Unk	98	94.199	ENSLAFG00000022662	UNK	98	94.199	Loxodonta_africana
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSMFAG00000037148	UNK	98	95.449	Macaca_fascicularis
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSMMUG00000013646	UNK	98	95.449	Macaca_mulatta
MGP_CAROLIEiJ_G0017427	Unk	98	95.575	ENSMNEG00000036240	UNK	98	95.575	Macaca_nemestrina
MGP_CAROLIEiJ_G0017427	Unk	98	95.070	ENSMLEG00000043327	UNK	98	95.070	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017427	Unk	96	56.747	ENSMAMG00000001390	unk	94	57.125	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017427	Unk	96	85.185	ENSMGAG00000004713	UNK	100	85.185	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017427	Unk	100	97.901	ENSMAUG00000011025	Unk	100	97.901	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017427	Unk	98	95.575	ENSMICG00000007591	UNK	98	95.575	Microcebus_murinus
MGP_CAROLIEiJ_G0017427	Unk	100	98.395	ENSMOCG00000021657	Unk	100	98.395	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017427	Unk	96	57.050	ENSMMOG00000004874	unk	94	58.323	Mola_mola
MGP_CAROLIEiJ_G0017427	Unk	97	86.856	ENSMODG00000007684	UNK	85	86.951	Monodelphis_domestica
MGP_CAROLIEiJ_G0017427	Unk	100	99.506	ENSMUSG00000020770	Unk	100	99.506	Mus_musculus
MGP_CAROLIEiJ_G0017427	Unk	100	98.642	MGP_PahariEiJ_G0018556	Unk	100	98.642	Mus_pahari
MGP_CAROLIEiJ_G0017427	Unk	100	99.506	MGP_SPRETEiJ_G0018272	Unk	100	99.506	Mus_spretus
MGP_CAROLIEiJ_G0017427	Unk	98	94.332	ENSMPUG00000013806	UNK	98	94.332	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017427	Unk	98	94.817	ENSMLUG00000015453	UNK	98	94.817	Myotis_lucifugus
MGP_CAROLIEiJ_G0017427	Unk	100	96.790	ENSNGAG00000012366	Unk	100	96.790	Nannospalax_galili
MGP_CAROLIEiJ_G0017427	Unk	100	89.630	ENSNLEG00000001120	UNK	98	91.371	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017427	Unk	97	86.023	ENSMEUG00000004094	UNK	97	86.242	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017427	Unk	100	93.210	ENSOPRG00000012784	UNK	98	93.300	Ochotona_princeps
MGP_CAROLIEiJ_G0017427	Unk	98	90.013	ENSODEG00000010183	UNK	98	89.760	Octodon_degus
MGP_CAROLIEiJ_G0017427	Unk	98	93.932	ENSOCUG00000014994	UNK	98	93.932	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017427	Unk	96	55.683	ENSORLG00000028573	unk	94	57.599	Oryzias_latipes
MGP_CAROLIEiJ_G0017427	Unk	96	54.264	ENSOMEG00000009977	unk	95	55.856	Oryzias_melastigma
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSOGAG00000001922	UNK	90	95.449	Otolemur_garnettii
MGP_CAROLIEiJ_G0017427	Unk	98	84.204	ENSOARG00000009548	UNK	97	84.204	Ovis_aries
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSPPAG00000032800	UNK	98	95.449	Pan_paniscus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSPPRG00000008948	UNK	98	95.449	Panthera_pardus
MGP_CAROLIEiJ_G0017427	Unk	98	95.322	ENSPTIG00000005435	UNK	98	95.322	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSPTRG00000009656	UNK	98	95.449	Pan_troglodytes
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSPANG00000020121	UNK	98	95.449	Papio_anubis
MGP_CAROLIEiJ_G0017427	Unk	96	56.616	ENSPKIG00000022222	unk	94	58.450	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017427	Unk	79	79.666	ENSPSIG00000009640	UNK	100	79.666	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017427	Unk	96	57.125	ENSPMGG00000021574	unk	93	57.942	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0017427	Unk	100	97.901	ENSPEMG00000016145	Unk	100	97.901	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017427	Unk	99	90.062	ENSPCIG00000020300	UNK	85	89.949	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSPPYG00000008637	UNK	98	95.449	Pongo_abelii
MGP_CAROLIEiJ_G0017427	Unk	88	88.155	ENSPCAG00000004504	UNK	88	88.155	Procavia_capensis
MGP_CAROLIEiJ_G0017427	Unk	98	95.575	ENSPCOG00000027411	UNK	98	95.575	Propithecus_coquereli
MGP_CAROLIEiJ_G0017427	Unk	92	98.370	ENSPVAG00000008460	UNK	92	98.370	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017427	Unk	95	59.608	ENSPNAG00000011973	unk	93	60.183	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017427	Unk	100	98.272	ENSRNOG00000006600	Unk	100	98.272	Rattus_norvegicus
MGP_CAROLIEiJ_G0017427	Unk	98	95.702	ENSRBIG00000025523	UNK	98	95.702	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017427	Unk	98	95.575	ENSRROG00000013651	UNK	98	95.575	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017427	Unk	98	95.449	ENSSBOG00000019483	UNK	98	95.449	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017427	Unk	97	89.734	ENSSHAG00000017696	UNK	97	89.835	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017427	Unk	96	56.298	ENSSFOG00015003052	unk	90	60.669	Scleropages_formosus
MGP_CAROLIEiJ_G0017427	Unk	96	58.077	ENSSDUG00000012373	unk	94	58.559	Seriola_dumerili
MGP_CAROLIEiJ_G0017427	Unk	96	57.088	ENSSLDG00000001990	unk	94	58.440	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017427	Unk	99	81.975	ENSSPUG00000008526	UNK	97	84.476	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017427	Unk	98	94.943	ENSSSCG00000017201	UNK	98	94.943	Sus_scrofa
MGP_CAROLIEiJ_G0017427	Unk	97	87.372	ENSTGUG00000008279	UNK	98	87.231	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017427	Unk	52	98.039	ENSTBEG00000016178	-	53	98.039	Tupaia_belangeri
MGP_CAROLIEiJ_G0017427	Unk	92	98.034	ENSTTRG00000015890	UNK	90	98.324	Tursiops_truncatus
MGP_CAROLIEiJ_G0017427	Unk	96	91.613	ENSUAMG00000003483	UNK	97	91.613	Ursus_americanus
MGP_CAROLIEiJ_G0017427	Unk	96	95.613	ENSUMAG00000010576	UNK	99	95.613	Ursus_maritimus
MGP_CAROLIEiJ_G0017427	Unk	56	96.078	ENSVPAG00000011532	-	57	96.078	Vicugna_pacos
MGP_CAROLIEiJ_G0017427	Unk	100	98.365	ENSVVUG00000014786	UNK	100	98.365	Vulpes_vulpes
MGP_CAROLIEiJ_G0017427	Unk	97	77.876	ENSXETG00000012578	unk	96	78.344	Xenopus_tropicalis