EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017579 (Gene tree)
Gene ID: 110307239
Gene Symbol: Dnajc27
Alias: C330021A05Rik|Rabj|Rbj
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 32408 bases
Position: chr12:869892-902299
Accession: 110307239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0031823	MMR_HSR1	PF01926.23	3.7e-05	1	1
MGP_CAROLIEiJ_P0031824	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0031824	-	2926	-	MGP_CAROLIEiJ_P0031824	273 (aa)	-	UPI000A31647A
MGP_CAROLIEiJ_T0031823	-	4581	XM_021179513	MGP_CAROLIEiJ_P0031823	273 (aa)	XP_021035172	UPI000A31647A

Gene Model

Click here to download MGP_CAROLIEiJ_G0017579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0017579	Dnajc27	60	31.325	MGP_CAROLIEiJ_G0033427	Rab9b	82	31.325
MGP_CAROLIEiJ_G0017579	Dnajc27	70	30.693	MGP_CAROLIEiJ_G0023477	-	92	31.250
MGP_CAROLIEiJ_G0017579	Dnajc27	60	32.927	MGP_CAROLIEiJ_G0025796	Rab2a	75	32.927
MGP_CAROLIEiJ_G0017579	Dnajc27	56	33.117	MGP_CAROLIEiJ_G0033044	Rab33a	63	33.117
MGP_CAROLIEiJ_G0017579	Dnajc27	58	31.447	MGP_CAROLIEiJ_G0024752	Rab22a	79	31.447
MGP_CAROLIEiJ_G0017579	Dnajc27	58	32.278	MGP_CAROLIEiJ_G0019238	Rab2b	78	32.692
MGP_CAROLIEiJ_G0017579	Dnajc27	66	30.769	MGP_CAROLIEiJ_G0017386	Rab37	80	30.769
MGP_CAROLIEiJ_G0017579	Dnajc27	60	30.061	MGP_CAROLIEiJ_G0021741	Rab5a	87	30.061
MGP_CAROLIEiJ_G0017579	Dnajc27	61	34.731	MGP_CAROLIEiJ_G0021978	Rab18	79	34.731
MGP_CAROLIEiJ_G0017579	Dnajc27	63	33.714	MGP_CAROLIEiJ_G0021830	Rab31	87	33.714
MGP_CAROLIEiJ_G0017579	Dnajc27	60	30.303	MGP_CAROLIEiJ_G0032346	Rab11a	74	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSG00000115137	DNAJC27	100	93.407	Homo_sapiens
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSAPOG00000020278	dnajc27	100	83.150	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.796	ENSAMEG00000002554	DNAJC27	100	93.796	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017579	Dnajc27	99	81.685	ENSACIG00000009139	dnajc27	100	81.685	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSAOCG00000006604	dnajc27	100	83.150	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSAPEG00000009586	dnajc27	100	83.150	Amphiprion_percula
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSATEG00000008796	dnajc27	100	83.150	Anabas_testudineus
MGP_CAROLIEiJ_G0017579	Dnajc27	98	90.637	ENSACAG00000010248	DNAJC27	99	90.637	Anolis_carolinensis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSANAG00000032274	DNAJC27	100	93.773	Aotus_nancymaae
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSACLG00000004019	dnajc27	100	83.150	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSAMXG00000041488	dnajc27	99	82.418	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSBTAG00000018239	DNAJC27	100	93.040	Bos_taurus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSCJAG00000008094	DNAJC27	100	93.773	Callithrix_jacchus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.066	ENSCAFG00000004098	DNAJC27	100	93.066	Canis_familiaris
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSCAFG00020025277	DNAJC27	100	93.773	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.674	ENSCHIG00000013821	DNAJC27	100	92.674	Capra_hircus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSTSYG00000014096	DNAJC27	99	94.318	Carlito_syrichta
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSCPOG00000006843	DNAJC27	100	93.040	Cavia_porcellus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSCCAG00000021410	DNAJC27	100	93.407	Cebus_capucinus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSCATG00000029231	DNAJC27	100	93.040	Cercocebus_atys
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSCLAG00000008212	DNAJC27	100	93.040	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSCSAG00000008536	DNAJC27	100	93.407	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	90.110	ENSCPBG00000022284	DNAJC27	100	90.110	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017579	Dnajc27	97	64.773	ENSCING00000000917	rbj	99	64.773	Ciona_intestinalis
MGP_CAROLIEiJ_G0017579	Dnajc27	97	65.909	ENSCSAVG00000006409	-	99	65.909	Ciona_savignyi
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.308	ENSCANG00000029144	-	100	92.308	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	96.337	ENSCGRG00001023794	Dnajc27	100	96.337	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017579	Dnajc27	100	96.337	ENSCGRG00000007127	Dnajc27	100	96.337	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSCSEG00000014284	dnajc27	100	83.150	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.883	ENSDARG00000070916	dnajc27	100	83.883	Danio_rerio
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.701	ENSDNOG00000040043	DNAJC27	100	92.701	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	95.604	ENSDORG00000015134	Dnajc27	100	95.604	Dipodomys_ordii
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSEASG00005010598	DNAJC27	100	93.407	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSECAG00000024595	DNAJC27	100	93.773	Equus_caballus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSELUG00000019264	dnajc27	100	82.784	Esox_lucius
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSFCAG00000038919	DNAJC27	100	93.773	Felis_catus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	74.545	ENSFALG00000012658	DNAJC27	100	74.545	Ficedula_albicollis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	90.110	ENSGALG00000028967	DNAJC27	100	90.110	Gallus_gallus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSGACG00000015457	dnajc27	100	82.784	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSGGOG00000004081	DNAJC27	100	93.040	Gorilla_gorilla
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSHBUG00000001491	dnajc27	100	83.150	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSHGLG00000013756	DNAJC27	100	93.040	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSHGLG00100009434	DNAJC27	100	93.040	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSHCOG00000002948	dnajc27	100	83.150	Hippocampus_comes
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSIPUG00000015086	dnajc27	100	83.150	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	94.872	ENSSTOG00000006080	DNAJC27	100	94.872	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSJJAG00000016683	Dnajc27	100	93.040	Jaculus_jaculus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSKMAG00000011954	dnajc27	100	83.150	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017579	Dnajc27	93	69.663	ENSLBEG00000018738	-	95	69.517	Labrus_bergylta
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSLBEG00000028391	dnajc27	100	83.150	Labrus_bergylta
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.051	ENSLACG00000012994	DNAJC27	100	82.051	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSLOCG00000016679	dnajc27	100	82.784	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSLAFG00000002742	DNAJC27	100	93.040	Loxodonta_africana
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSMFAG00000043229	DNAJC27	100	93.040	Macaca_fascicularis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSMMUG00000009603	DNAJC27	100	93.040	Macaca_mulatta
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSMAMG00000022707	dnajc27	100	83.150	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSMZEG00005012058	dnajc27	100	83.150	Maylandia_zebra
MGP_CAROLIEiJ_G0017579	Dnajc27	100	95.971	ENSMAUG00000000099	Dnajc27	100	95.971	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	94.139	ENSMICG00000027424	DNAJC27	100	94.139	Microcebus_murinus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	96.350	ENSMOCG00000015357	Dnajc27	100	96.350	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017579	Dnajc27	100	87.912	ENSMODG00000015869	DNAJC27	100	87.912	Monodelphis_domestica
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSMALG00000001189	dnajc27	100	82.784	Monopterus_albus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	99.634	ENSMUSG00000020657	Dnajc27	100	99.634	Mus_musculus
MGP_CAROLIEiJ_G0017579	Dnajc27	64	98.864	MGP_PahariEiJ_G0029339	-	80	98.864	Mus_pahari
MGP_CAROLIEiJ_G0017579	Dnajc27	100	100.000	MGP_SPRETEiJ_G0018423	Dnajc27	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSMPUG00000014032	DNAJC27	100	93.407	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017579	Dnajc27	100	91.941	ENSMLUG00000014143	DNAJC27	100	91.941	Myotis_lucifugus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSNBRG00000022552	dnajc27	100	83.150	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSNLEG00000001103	DNAJC27	100	93.407	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017579	Dnajc27	100	90.842	ENSOPRG00000008650	DNAJC27	100	90.842	Ochotona_princeps
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.674	ENSODEG00000007488	DNAJC27	100	92.674	Octodon_degus
MGP_CAROLIEiJ_G0017579	Dnajc27	96	82.824	ENSONIG00000009008	dnajc27	97	82.824	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	94.872	ENSOCUG00000011260	DNAJC27	100	94.872	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSORLG00000001134	dnajc27	100	82.418	Oryzias_latipes
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSORLG00020006790	dnajc27	100	82.418	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSORLG00015010005	dnajc27	100	82.418	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.051	ENSOMEG00000017890	dnajc27	100	82.051	Oryzias_melastigma
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSOGAG00000015168	DNAJC27	100	93.773	Otolemur_garnettii
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.336	ENSOARG00000018127	DNAJC27	100	92.336	Ovis_aries
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSPPAG00000031678	DNAJC27	100	93.407	Pan_paniscus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSPPRG00000022920	DNAJC27	100	93.773	Panthera_pardus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSPTIG00000013443	DNAJC27	100	93.773	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSPTRG00000011719	DNAJC27	100	93.407	Pan_troglodytes
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.674	ENSPANG00000023972	DNAJC27	100	92.674	Papio_anubis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSPKIG00000005931	DNAJC27	100	82.784	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017579	Dnajc27	65	81.921	ENSPKIG00000005039	dnajc27	96	81.921	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017579	Dnajc27	100	90.110	ENSPSIG00000009930	DNAJC27	100	90.110	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017579	Dnajc27	98	74.359	ENSPMAG00000005573	dnajc27	98	74.359	Petromyzon_marinus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	88.645	ENSPCIG00000025239	DNAJC27	100	88.645	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSPFOG00000006335	dnajc27	100	82.418	Poecilia_formosa
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSPLAG00000008845	dnajc27	100	82.784	Poecilia_latipinna
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSPMEG00000018256	dnajc27	100	82.418	Poecilia_mexicana
MGP_CAROLIEiJ_G0017579	Dnajc27	66	79.558	ENSPREG00000010228	dnajc27	93	79.558	Poecilia_reticulata
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSPPYG00000012594	DNAJC27	100	93.407	Pongo_abelii
MGP_CAROLIEiJ_G0017579	Dnajc27	100	94.505	ENSPCOG00000025665	DNAJC27	100	94.505	Propithecus_coquereli
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSPVAG00000017520	DNAJC27	100	93.773	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSPNYG00000023681	dnajc27	100	83.150	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSPNAG00000025619	dnajc27	100	82.418	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017579	Dnajc27	100	97.436	ENSRNOG00000003988	Dnajc27	100	97.436	Rattus_norvegicus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.674	ENSRBIG00000041935	-	99	93.750	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.040	ENSRROG00000031027	-	99	94.318	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017579	Dnajc27	50	89.706	ENSSHAG00000002151	-	93	89.706	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSSFOG00015020074	DNAJC27	100	83.150	Scleropages_formosus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSSFOG00015017512	dnajc27	100	82.784	Scleropages_formosus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.516	ENSSMAG00000000032	dnajc27	100	83.516	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSSDUG00000003036	dnajc27	100	83.150	Seriola_dumerili
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSSLDG00000015143	dnajc27	100	83.150	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017579	Dnajc27	58	74.214	ENSSPUG00000006583	DNAJC27	99	74.214	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.784	ENSSPAG00000009154	dnajc27	100	82.784	Stegastes_partitus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSSSCG00000008577	DNAJC27	99	95.455	Sus_scrofa
MGP_CAROLIEiJ_G0017579	Dnajc27	100	83.150	ENSTRUG00000023427	dnajc27	100	83.150	Takifugu_rubripes
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.418	ENSTNIG00000006596	dnajc27	100	82.418	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017579	Dnajc27	100	94.139	ENSTBEG00000005463	DNAJC27	100	94.139	Tupaia_belangeri
MGP_CAROLIEiJ_G0017579	Dnajc27	100	92.674	ENSTTRG00000015163	DNAJC27	100	92.674	Tursiops_truncatus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSUAMG00000009585	DNAJC27	100	93.773	Ursus_americanus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.773	ENSUMAG00000022558	DNAJC27	100	93.773	Ursus_maritimus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	86.081	ENSVPAG00000006953	DNAJC27	100	86.081	Vicugna_pacos
MGP_CAROLIEiJ_G0017579	Dnajc27	100	93.407	ENSVVUG00000015241	DNAJC27	100	93.407	Vulpes_vulpes
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.051	ENSXCOG00000010812	dnajc27	100	82.051	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0017579	Dnajc27	100	82.051	ENSXMAG00000003407	dnajc27	100	82.051	Xiphophorus_maculatus