EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017692 (Gene tree)
Gene ID: 110306913
Gene Symbol: Twistnb
Alias: 2810024J17Rik|D16Wsu83e
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 10065 bases
Position: chr12:29839628-29849692
Accession: 110306913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0032131	SHS2_Rpb7-N	PF03876.17	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0032131	-	2326	-	MGP_CAROLIEiJ_P0032131	331 (aa)	XP_021034731	UPI000A31882A

Gene Model

Click here to download MGP_CAROLIEiJ_G0017692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017692	Twistnb	99	76.133	ENSG00000105849	TWISTNB	96	75.529	Homo_sapiens
MGP_CAROLIEiJ_G0017692	Twistnb	64	53.052	ENSAPOG00000011796	twistnb	55	53.738	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017692	Twistnb	100	64.249	ENSAMEG00000008558	TWISTNB	98	65.026	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017692	Twistnb	94	41.298	ENSACIG00000020400	twistnb	84	41.212	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017692	Twistnb	61	55.172	ENSAOCG00000024200	twistnb	53	55.172	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0017692	Twistnb	61	55.665	ENSAPEG00000016750	twistnb	53	55.665	Amphiprion_percula
MGP_CAROLIEiJ_G0017692	Twistnb	51	64.497	ENSACAG00000011817	TWISTNB	86	64.497	Anolis_carolinensis
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.227	ENSANAG00000026418	TWISTNB	99	73.964	Aotus_nancymaae
MGP_CAROLIEiJ_G0017692	Twistnb	56	56.452	ENSAMXG00000035868	twistnb	55	57.459	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017692	Twistnb	100	72.917	ENSBTAG00000006721	TWISTNB	99	71.131	Bos_taurus
MGP_CAROLIEiJ_G0017692	Twistnb	99	76.577	ENSCJAG00000001148	TWISTNB	99	75.588	Callithrix_jacchus
MGP_CAROLIEiJ_G0017692	Twistnb	100	70.029	ENSCAFG00000002511	TWISTNB	99	72.126	Canis_familiaris
MGP_CAROLIEiJ_G0017692	Twistnb	100	70.845	ENSCAFG00020002140	TWISTNB	92	72.965	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017692	Twistnb	93	74.038	ENSCHIG00000024078	TWISTNB	92	74.038	Capra_hircus
MGP_CAROLIEiJ_G0017692	Twistnb	100	74.041	ENSTSYG00000001471	TWISTNB	99	73.746	Carlito_syrichta
MGP_CAROLIEiJ_G0017692	Twistnb	100	76.923	ENSCPOG00000031651	TWISTNB	99	76.923	Cavia_porcellus
MGP_CAROLIEiJ_G0017692	Twistnb	99	76.737	ENSCCAG00000026416	TWISTNB	99	75.740	Cebus_capucinus
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.227	ENSCATG00000035621	TWISTNB	96	74.622	Cercocebus_atys
MGP_CAROLIEiJ_G0017692	Twistnb	100	77.286	ENSCLAG00000012696	TWISTNB	99	77.286	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSCSAG00000013544	TWISTNB	96	74.924	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017692	Twistnb	79	83.333	ENSCHOG00000006034	TWISTNB	78	83.333	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017692	Twistnb	91	61.258	ENSCPBG00000000367	TWISTNB	92	61.311	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSCANG00000038759	TWISTNB	96	74.924	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017692	Twistnb	100	83.384	ENSCGRG00001000499	Twistnb	100	83.082	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017692	Twistnb	100	73.294	ENSDNOG00000006438	-	99	73.669	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017692	Twistnb	93	74.920	ENSDORG00000007795	Twistnb	99	74.923	Dipodomys_ordii
MGP_CAROLIEiJ_G0017692	Twistnb	100	76.923	ENSEASG00005021702	TWISTNB	95	76.627	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017692	Twistnb	100	76.923	ENSECAG00000014563	TWISTNB	95	76.627	Equus_caballus
MGP_CAROLIEiJ_G0017692	Twistnb	94	45.075	ENSELUG00000000098	TWISTNB	82	48.366	Esox_lucius
MGP_CAROLIEiJ_G0017692	Twistnb	98	78.395	ENSFCAG00000025987	TWISTNB	99	76.261	Felis_catus
MGP_CAROLIEiJ_G0017692	Twistnb	79	52.330	ENSFALG00000009761	TWISTNB	89	51.786	Ficedula_albicollis
MGP_CAROLIEiJ_G0017692	Twistnb	98	77.301	ENSFDAG00000017368	TWISTNB	99	75.740	Fukomys_damarensis
MGP_CAROLIEiJ_G0017692	Twistnb	56	59.459	ENSFHEG00000013318	twistnb	50	59.459	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017692	Twistnb	85	59.028	ENSGALG00000010863	TWISTNB	69	58.681	Gallus_gallus
MGP_CAROLIEiJ_G0017692	Twistnb	63	51.852	ENSGACG00000006425	twistnb	66	56.322	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017692	Twistnb	99	76.133	ENSGGOG00000026888	TWISTNB	96	75.831	Gorilla_gorilla
MGP_CAROLIEiJ_G0017692	Twistnb	100	76.331	ENSHGLG00000010976	TWISTNB	99	76.036	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017692	Twistnb	98	77.914	ENSHGLG00100005410	TWISTNB	99	76.036	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017692	Twistnb	99	37.921	ENSIPUG00000004117	twistnb	55	51.741	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017692	Twistnb	100	78.042	ENSSTOG00000022702	TWISTNB	92	78.042	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017692	Twistnb	99	74.030	ENSJJAG00000015887	Twistnb	99	74.030	Jaculus_jaculus
MGP_CAROLIEiJ_G0017692	Twistnb	53	59.195	ENSKMAG00000001591	twistnb	50	57.838	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017692	Twistnb	90	54.575	ENSLACG00000010508	TWISTNB	87	52.769	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017692	Twistnb	60	61.000	ENSLOCG00000011399	twistnb	60	61.307	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017692	Twistnb	100	74.556	ENSLAFG00000008755	TWISTNB	100	74.260	Loxodonta_africana
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSMFAG00000045328	TWISTNB	96	74.924	Macaca_fascicularis
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSMMUG00000009609	TWISTNB	96	74.924	Macaca_mulatta
MGP_CAROLIEiJ_G0017692	Twistnb	99	74.924	ENSMNEG00000041159	TWISTNB	96	74.320	Macaca_nemestrina
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSMLEG00000042783	TWISTNB	96	74.924	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017692	Twistnb	100	78.743	ENSMICG00000036489	TWISTNB	99	78.743	Microcebus_murinus
MGP_CAROLIEiJ_G0017692	Twistnb	98	84.830	ENSMOCG00000003458	Twistnb	99	84.830	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017692	Twistnb	89	59.060	ENSMODG00000001402	-	65	59.396	Monodelphis_domestica
MGP_CAROLIEiJ_G0017692	Twistnb	57	55.263	ENSMALG00000016407	twistnb	50	55.263	Monopterus_albus
MGP_CAROLIEiJ_G0017692	Twistnb	100	97.281	ENSMUSG00000020561	Twistnb	100	97.281	Mus_musculus
MGP_CAROLIEiJ_G0017692	Twistnb	100	92.749	MGP_PahariEiJ_G0029450	Twistnb	100	91.843	Mus_pahari
MGP_CAROLIEiJ_G0017692	Twistnb	100	98.489	MGP_SPRETEiJ_G0018534	Twistnb	100	98.489	Mus_spretus
MGP_CAROLIEiJ_G0017692	Twistnb	100	74.702	ENSMPUG00000013948	TWISTNB	93	74.702	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017692	Twistnb	92	71.795	ENSMLUG00000008848	TWISTNB	99	72.756	Myotis_lucifugus
MGP_CAROLIEiJ_G0017692	Twistnb	60	89.000	ENSNGAG00000022455	Twistnb	99	89.000	Nannospalax_galili
MGP_CAROLIEiJ_G0017692	Twistnb	58	55.959	ENSNBRG00000008652	twistnb	52	55.959	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0017692	Twistnb	94	76.997	ENSNLEG00000035755	TWISTNB	91	76.677	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017692	Twistnb	100	71.006	ENSOPRG00000016109	TWISTNB	98	71.006	Ochotona_princeps
MGP_CAROLIEiJ_G0017692	Twistnb	100	75.516	ENSODEG00000007222	TWISTNB	99	76.106	Octodon_degus
MGP_CAROLIEiJ_G0017692	Twistnb	90	44.089	ENSORLG00020002579	twistnb	53	56.436	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017692	Twistnb	99	74.622	ENSOGAG00000009189	TWISTNB	96	77.039	Otolemur_garnettii
MGP_CAROLIEiJ_G0017692	Twistnb	93	74.277	ENSOARG00000009803	TWISTNB	90	73.955	Ovis_aries
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.831	ENSPPAG00000034623	TWISTNB	96	75.529	Pan_paniscus
MGP_CAROLIEiJ_G0017692	Twistnb	98	77.469	ENSPPRG00000005877	TWISTNB	99	74.041	Panthera_pardus
MGP_CAROLIEiJ_G0017692	Twistnb	87	78.472	ENSPTIG00000021539	TWISTNB	99	76.412	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017692	Twistnb	99	76.435	ENSPTRG00000018962	TWISTNB	96	75.831	Pan_troglodytes
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.227	ENSPANG00000015736	TWISTNB	96	74.622	Papio_anubis
MGP_CAROLIEiJ_G0017692	Twistnb	54	64.246	ENSPKIG00000025635	twistnb	51	61.828	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017692	Twistnb	85	57.447	ENSPCIG00000017456	TWISTNB	88	57.095	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.529	ENSPPYG00000017752	TWISTNB	96	75.301	Pongo_abelii
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.749	ENSPCOG00000017601	TWISTNB	98	77.246	Propithecus_coquereli
MGP_CAROLIEiJ_G0017692	Twistnb	99	70.118	ENSPVAG00000015574	TWISTNB	98	71.302	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017692	Twistnb	58	57.216	ENSPNYG00000002674	twistnb	51	57.216	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017692	Twistnb	93	42.547	ENSPNAG00000011956	twistnb	51	56.150	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017692	Twistnb	98	90.402	ENSRNOG00000010750	Twistnb	100	90.093	Rattus_norvegicus
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.227	ENSRBIG00000043007	TWISTNB	95	74.622	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.227	ENSRROG00000040155	TWISTNB	96	74.622	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017692	Twistnb	99	75.000	ENSSBOG00000023188	TWISTNB	99	74.631	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017692	Twistnb	50	60.843	ENSSFOG00015012788	twistnb	56	58.101	Scleropages_formosus
MGP_CAROLIEiJ_G0017692	Twistnb	91	44.136	ENSSMAG00000012792	twistnb	78	47.079	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017692	Twistnb	91	49.505	ENSSPUG00000007595	TWISTNB	92	49.315	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017692	Twistnb	100	73.731	ENSSSCG00000025298	TWISTNB	99	72.485	Sus_scrofa
MGP_CAROLIEiJ_G0017692	Twistnb	93	41.745	ENSTNIG00000017778	twistnb	65	50.935	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017692	Twistnb	100	75.000	ENSTBEG00000003554	TWISTNB	98	74.702	Tupaia_belangeri
MGP_CAROLIEiJ_G0017692	Twistnb	100	75.595	ENSUAMG00000017593	TWISTNB	99	75.595	Ursus_americanus
MGP_CAROLIEiJ_G0017692	Twistnb	100	75.595	ENSUMAG00000022203	TWISTNB	99	75.595	Ursus_maritimus
MGP_CAROLIEiJ_G0017692	Twistnb	100	70.262	ENSVVUG00000008386	TWISTNB	99	73.256	Vulpes_vulpes
MGP_CAROLIEiJ_G0017692	Twistnb	64	55.140	ENSXCOG00000020199	twistnb	51	59.043	Xiphophorus_couchianus