EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017791 (Gene tree)
Gene ID: 110307393
Gene Symbol: Fancm
Alias: C730036B14Rik|D12Ertd364e
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 57213 bases
Position: chr12:59989814-60047026
Accession: 110307393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0032380	ResIII	PF04851.15	6.5e-17	1	1
MGP_CAROLIEiJ_P0032380	DEAD	PF00270.29	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0032380	-	7778	XM_021179626	MGP_CAROLIEiJ_P0032380	2012 (aa)	XP_021035285	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017791	Fancm	99	64.286	ENSG00000187790	FANCM	99	82.934	Homo_sapiens
MGP_CAROLIEiJ_G0017791	Fancm	99	62.997	ENSAMEG00000002114	FANCM	99	63.046	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017791	Fancm	89	46.942	ENSATEG00000012412	-	77	54.355	Anabas_testudineus
MGP_CAROLIEiJ_G0017791	Fancm	99	64.078	ENSANAG00000025075	FANCM	99	64.511	Aotus_nancymaae
MGP_CAROLIEiJ_G0017791	Fancm	80	52.126	ENSACLG00000016008	-	78	53.872	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017791	Fancm	60	52.650	ENSAMXG00000020275	-	72	52.824	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017791	Fancm	99	61.849	ENSBTAG00000002612	FANCM	95	82.303	Bos_taurus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.676	ENSCJAG00000015945	FANCM	99	64.033	Callithrix_jacchus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.749	ENSCAFG00000014062	FANCM	99	62.846	Canis_familiaris
MGP_CAROLIEiJ_G0017791	Fancm	99	63.372	ENSCHIG00000015176	FANCM	100	63.517	Capra_hircus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.481	ENSCPOG00000001446	FANCM	100	62.531	Cavia_porcellus
MGP_CAROLIEiJ_G0017791	Fancm	96	64.645	ENSCCAG00000026593	FANCM	99	62.579	Cebus_capucinus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.786	ENSCATG00000031379	FANCM	99	63.950	Cercocebus_atys
MGP_CAROLIEiJ_G0017791	Fancm	99	64.192	ENSCSAG00000015308	FANCM	99	64.192	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017791	Fancm	77	71.598	ENSCHOG00000000190	FANCM	79	71.598	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017791	Fancm	97	46.279	ENSCPBG00000015089	FANCM	100	45.573	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017791	Fancm	99	63.711	ENSCANG00000029498	FANCM	99	63.874	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017791	Fancm	99	75.235	ENSCGRG00001023573	Fancm	100	75.433	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017791	Fancm	61	58.172	ENSCVAG00000015579	-	67	58.310	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0017791	Fancm	99	61.041	ENSDNOG00000007697	FANCM	99	60.849	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.729	ENSDORG00000010095	Fancm	99	62.729	Dipodomys_ordii
MGP_CAROLIEiJ_G0017791	Fancm	80	75.000	ENSETEG00000003360	FANCM	81	75.000	Echinops_telfairi
MGP_CAROLIEiJ_G0017791	Fancm	99	59.689	ENSEASG00005007781	FANCM	99	82.280	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.963	ENSECAG00000018694	FANCM	86	63.081	Equus_caballus
MGP_CAROLIEiJ_G0017791	Fancm	86	52.229	ENSEEUG00000005607	-	92	46.782	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017791	Fancm	73	50.592	ENSELUG00000015761	-	90	44.940	Esox_lucius
MGP_CAROLIEiJ_G0017791	Fancm	96	42.140	ENSFALG00000001703	FANCM	100	42.427	Ficedula_albicollis
MGP_CAROLIEiJ_G0017791	Fancm	99	61.831	ENSFDAG00000009043	FANCM	100	61.812	Fukomys_damarensis
MGP_CAROLIEiJ_G0017791	Fancm	59	57.500	ENSGMOG00000002019	-	73	58.333	Gadus_morhua
MGP_CAROLIEiJ_G0017791	Fancm	96	43.836	ENSGALG00000031182	FANCM	92	61.224	Gallus_gallus
MGP_CAROLIEiJ_G0017791	Fancm	85	53.404	ENSGACG00000009448	-	99	38.680	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.950	ENSGGOG00000008546	FANCM	99	64.064	Gorilla_gorilla
MGP_CAROLIEiJ_G0017791	Fancm	71	51.908	ENSHBUG00000007085	-	70	53.645	Haplochromis_burtoni
MGP_CAROLIEiJ_G0017791	Fancm	99	62.257	ENSHGLG00000013787	FANCM	100	62.658	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017791	Fancm	99	62.208	ENSHGLG00100006377	FANCM	100	62.610	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017791	Fancm	69	53.458	ENSIPUG00000014629	fancm	88	54.648	Ictalurus_punctatus
MGP_CAROLIEiJ_G0017791	Fancm	72	47.429	ENSLBEG00000004982	-	79	47.048	Labrus_bergylta
MGP_CAROLIEiJ_G0017791	Fancm	99	43.326	ENSLACG00000007739	FANCM	99	43.326	Latimeria_chalumnae
MGP_CAROLIEiJ_G0017791	Fancm	69	60.000	ENSLOCG00000011318	FANCM	91	45.662	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.393	ENSLAFG00000001136	FANCM	100	63.460	Loxodonta_africana
MGP_CAROLIEiJ_G0017791	Fancm	99	63.689	ENSMFAG00000000383	FANCM	99	63.852	Macaca_fascicularis
MGP_CAROLIEiJ_G0017791	Fancm	99	63.592	ENSMMUG00000016513	FANCM	99	63.755	Macaca_mulatta
MGP_CAROLIEiJ_G0017791	Fancm	99	63.738	ENSMNEG00000038659	FANCM	99	63.901	Macaca_nemestrina
MGP_CAROLIEiJ_G0017791	Fancm	96	73.671	ENSMLEG00000035743	FANCM	99	73.671	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017791	Fancm	67	54.651	ENSMAMG00000007087	-	77	54.651	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017791	Fancm	80	52.126	ENSMZEG00005004644	-	79	53.872	Maylandia_zebra
MGP_CAROLIEiJ_G0017791	Fancm	99	72.409	ENSMAUG00000015450	Fancm	100	72.593	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.817	ENSMICG00000005811	FANCM	99	63.769	Microcebus_murinus
MGP_CAROLIEiJ_G0017791	Fancm	99	71.992	ENSMOCG00000008775	Fancm	100	72.337	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017791	Fancm	64	56.026	ENSMMOG00000010215	-	67	58.117	Mola_mola
MGP_CAROLIEiJ_G0017791	Fancm	99	49.399	ENSMODG00000007334	FANCM	99	49.303	Monodelphis_domestica
MGP_CAROLIEiJ_G0017791	Fancm	100	93.667	ENSMUSG00000055884	Fancm	98	98.000	Mus_musculus
MGP_CAROLIEiJ_G0017791	Fancm	100	88.862	MGP_PahariEiJ_G0029547	Fancm	100	89.157	Mus_pahari
MGP_CAROLIEiJ_G0017791	Fancm	100	94.115	MGP_SPRETEiJ_G0018636	Fancm	100	94.263	Mus_spretus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.263	ENSMPUG00000004849	FANCM	99	62.263	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017791	Fancm	99	62.408	ENSMLUG00000006671	FANCM	100	62.408	Myotis_lucifugus
MGP_CAROLIEiJ_G0017791	Fancm	99	69.876	ENSNGAG00000017199	Fancm	99	69.777	Nannospalax_galili
MGP_CAROLIEiJ_G0017791	Fancm	99	64.466	ENSNLEG00000004432	FANCM	99	64.580	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017791	Fancm	70	61.937	ENSMEUG00000004977	-	71	62.270	Notamacropus_eugenii
MGP_CAROLIEiJ_G0017791	Fancm	83	47.822	ENSONIG00000003531	-	79	57.337	Oreochromis_niloticus
MGP_CAROLIEiJ_G0017791	Fancm	95	49.293	ENSOANG00000013997	FANCM	99	49.141	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.757	ENSOCUG00000007539	FANCM	99	62.561	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017791	Fancm	50	52.988	ENSORLG00000014503	-	79	53.900	Oryzias_latipes
MGP_CAROLIEiJ_G0017791	Fancm	58	52.868	ENSORLG00015012100	-	79	53.963	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0017791	Fancm	69	55.595	ENSOMEG00000010717	-	76	55.714	Oryzias_melastigma
MGP_CAROLIEiJ_G0017791	Fancm	99	62.133	ENSOGAG00000003015	FANCM	100	62.365	Otolemur_garnettii
MGP_CAROLIEiJ_G0017791	Fancm	99	63.143	ENSOARG00000009429	FANCM	100	63.337	Ovis_aries
MGP_CAROLIEiJ_G0017791	Fancm	99	64.189	ENSPPAG00000028944	FANCM	99	64.303	Pan_paniscus
MGP_CAROLIEiJ_G0017791	Fancm	99	64.286	ENSPTRG00000006307	FANCM	99	64.400	Pan_troglodytes
MGP_CAROLIEiJ_G0017791	Fancm	99	63.641	ENSPANG00000023200	FANCM	99	63.804	Papio_anubis
MGP_CAROLIEiJ_G0017791	Fancm	99	73.941	ENSPEMG00000005619	Fancm	100	74.089	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017791	Fancm	58	58.978	ENSPFOG00000002008	-	67	59.116	Poecilia_formosa
MGP_CAROLIEiJ_G0017791	Fancm	64	52.355	ENSPLAG00000014164	-	78	52.793	Poecilia_latipinna
MGP_CAROLIEiJ_G0017791	Fancm	64	52.350	ENSPMEG00000010746	-	77	52.678	Poecilia_mexicana
MGP_CAROLIEiJ_G0017791	Fancm	84	52.136	ENSPREG00000019849	-	95	52.683	Poecilia_reticulata
MGP_CAROLIEiJ_G0017791	Fancm	94	68.224	ENSPPYG00000005781	FANCM	98	68.146	Pongo_abelii
MGP_CAROLIEiJ_G0017791	Fancm	69	70.659	ENSPCAG00000011363	-	69	70.659	Procavia_capensis
MGP_CAROLIEiJ_G0017791	Fancm	93	75.882	ENSPCOG00000014388	FANCM	98	76.471	Propithecus_coquereli
MGP_CAROLIEiJ_G0017791	Fancm	69	76.509	ENSPVAG00000015802	FANCM	69	76.078	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017791	Fancm	92	44.907	ENSPNAG00000013558	-	99	36.141	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0017791	Fancm	99	83.670	ENSRNOG00000056721	Fancm	100	87.810	Rattus_norvegicus
MGP_CAROLIEiJ_G0017791	Fancm	99	63.416	ENSRBIG00000011451	FANCM	99	63.416	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017791	Fancm	99	63.786	ENSRROG00000028917	FANCM	99	63.950	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017791	Fancm	99	63.981	ENSSBOG00000030882	FANCM	99	64.095	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017791	Fancm	92	49.350	ENSSHAG00000000507	FANCM	100	49.610	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017791	Fancm	76	51.104	ENSSMAG00000019903	-	99	53.790	Scophthalmus_maximus
MGP_CAROLIEiJ_G0017791	Fancm	50	47.610	ENSSDUG00000016682	-	97	61.178	Seriola_dumerili
MGP_CAROLIEiJ_G0017791	Fancm	89	47.744	ENSSLDG00000003408	-	87	47.834	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017791	Fancm	80	79.195	ENSSARG00000002618	FANCM	80	79.698	Sorex_araneus
MGP_CAROLIEiJ_G0017791	Fancm	99	62.042	ENSSSCG00000005000	FANCM	99	62.042	Sus_scrofa
MGP_CAROLIEiJ_G0017791	Fancm	79	57.966	ENSTNIG00000017277	-	81	58.981	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017791	Fancm	99	63.340	ENSTTRG00000006669	FANCM	99	63.242	Tursiops_truncatus
MGP_CAROLIEiJ_G0017791	Fancm	71	82.286	ENSVPAG00000005763	FANCM	72	82.286	Vicugna_pacos
MGP_CAROLIEiJ_G0017791	Fancm	99	63.242	ENSVVUG00000000357	FANCM	99	63.340	Vulpes_vulpes
MGP_CAROLIEiJ_G0017791	Fancm	64	52.418	ENSXMAG00000007702	-	75	53.961	Xiphophorus_maculatus