EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0017824 (Gene tree)
Gene ID: 110307143
Gene Symbol: Arid4a
Alias: A630067N03Rik|Rbbp1
Full Name: AT-rich interaction domain 4A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 67351 bases
Position: chr12:65657532-65724882
Accession: 110307143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0032473	Tudor-knot	PF11717.8	4.4e-13	1	1
MGP_CAROLIEiJ_P0032470	Tudor-knot	PF11717.8	9.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0032472	-	1320	-	MGP_CAROLIEiJ_P0032472	295 (aa)	-	-
MGP_CAROLIEiJ_T0032473	-	1887	-	MGP_CAROLIEiJ_P0032473	531 (aa)	-	-
MGP_CAROLIEiJ_T0032470	-	5028	-	MGP_CAROLIEiJ_P0032470	1260 (aa)	XP_021035064	UPI000A31A904
MGP_CAROLIEiJ_T0032471	-	1639	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0017824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0017824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.420	ENSG00000032219	ARID4A	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0017824	Arid4a	80	57.542	ENSAPOG00000018856	arid4a	56	65.369	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0017824	Arid4a	99	83.750	ENSAMEG00000002532	ARID4A	99	83.750	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0017824	Arid4a	75	51.669	ENSACIG00000021943	-	63	55.165	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0017824	Arid4a	86	57.240	ENSATEG00000014386	arid4a	58	66.324	Anabas_testudineus
MGP_CAROLIEiJ_G0017824	Arid4a	99	71.295	ENSAPLG00000006185	ARID4A	100	71.707	Anas_platyrhynchos
MGP_CAROLIEiJ_G0017824	Arid4a	100	66.412	ENSACAG00000014637	ARID4A	99	66.284	Anolis_carolinensis
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.707	ENSANAG00000037559	ARID4A	100	84.707	Aotus_nancymaae
MGP_CAROLIEiJ_G0017824	Arid4a	82	53.906	ENSACLG00000005837	arid4a	73	58.506	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0017824	Arid4a	71	68.333	ENSAMXG00000000379	arid4a	90	67.280	Astyanax_mexicanus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.980	ENSBTAG00000018898	ARID4A	100	84.980	Bos_taurus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.945	ENSCJAG00000018764	ARID4A	100	84.945	Callithrix_jacchus
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.499	ENSCAFG00000023936	ARID4A	100	85.499	Canis_familiaris
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.341	ENSCAFG00020008690	ARID4A	99	85.341	Canis_lupus_dingo
MGP_CAROLIEiJ_G0017824	Arid4a	99	83.004	ENSCHIG00000021589	ARID4A	100	83.004	Capra_hircus
MGP_CAROLIEiJ_G0017824	Arid4a	99	84.286	ENSTSYG00000013397	ARID4A	99	83.810	Carlito_syrichta
MGP_CAROLIEiJ_G0017824	Arid4a	79	78.385	ENSCAPG00000008719	-	100	77.910	Cavia_aperea
MGP_CAROLIEiJ_G0017824	Arid4a	94	71.142	ENSCPOG00000032725	-	98	70.741	Cavia_porcellus
MGP_CAROLIEiJ_G0017824	Arid4a	99	79.848	ENSCCAG00000019639	ARID4A	98	81.796	Cebus_capucinus
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.499	ENSCATG00000041635	ARID4A	100	85.420	Cercocebus_atys
MGP_CAROLIEiJ_G0017824	Arid4a	99	71.751	ENSCLAG00000003914	-	99	71.375	Chinchilla_lanigera
MGP_CAROLIEiJ_G0017824	Arid4a	99	80.943	ENSCSAG00000014425	ARID4A	98	83.620	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0017824	Arid4a	99	79.848	ENSCHOG00000003408	ARID4A	94	77.052	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0017824	Arid4a	100	73.360	ENSCPBG00000024815	ARID4A	100	73.676	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.024	ENSCANG00000034778	ARID4A	100	85.024	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0017824	Arid4a	100	88.660	ENSCGRG00001018168	Arid4a	100	88.580	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.369	ENSCGRG00000005293	Arid4a	96	88.046	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0017824	Arid4a	85	57.613	ENSCSEG00000011930	arid4a	58	64.898	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0017824	Arid4a	100	83.426	ENSDNOG00000004090	ARID4A	100	83.029	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0017824	Arid4a	100	78.939	ENSDORG00000002170	Arid4a	100	78.860	Dipodomys_ordii
MGP_CAROLIEiJ_G0017824	Arid4a	82	98.039	ENSETEG00000014494	ARID4A	92	81.941	Echinops_telfairi
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.945	ENSEASG00005016222	ARID4A	99	84.945	Equus_asinus_asinus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.945	ENSECAG00000019256	ARID4A	100	84.945	Equus_caballus
MGP_CAROLIEiJ_G0017824	Arid4a	100	74.268	ENSEEUG00000001510	ARID4A	100	74.268	Erinaceus_europaeus
MGP_CAROLIEiJ_G0017824	Arid4a	71	66.461	ENSELUG00000003087	arid4a	69	66.180	Esox_lucius
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.786	ENSFCAG00000019223	ARID4A	100	84.786	Felis_catus
MGP_CAROLIEiJ_G0017824	Arid4a	100	71.551	ENSFALG00000003561	ARID4A	100	71.707	Ficedula_albicollis
MGP_CAROLIEiJ_G0017824	Arid4a	86	88.770	ENSFDAG00000005958	-	100	88.770	Fukomys_damarensis
MGP_CAROLIEiJ_G0017824	Arid4a	70	69.194	ENSFHEG00000004741	arid4a	69	63.934	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0017824	Arid4a	100	72.569	ENSGALG00000012037	ARID4A	100	73.360	Gallus_gallus
MGP_CAROLIEiJ_G0017824	Arid4a	100	72.806	ENSGAGG00000012085	ARID4A	100	73.123	Gopherus_agassizii
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.261	ENSGGOG00000027092	ARID4A	100	85.261	Gorilla_gorilla
MGP_CAROLIEiJ_G0017824	Arid4a	99	76.281	ENSHGLG00000001903	-	99	75.849	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0017824	Arid4a	99	75.332	ENSHGLG00100005885	-	99	74.906	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.975	ENSSTOG00000019680	ARID4A	100	85.975	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0017824	Arid4a	95	90.374	ENSJJAG00000016742	Arid4a	100	90.374	Jaculus_jaculus
MGP_CAROLIEiJ_G0017824	Arid4a	80	54.852	ENSKMAG00000018271	arid4a	56	63.765	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0017824	Arid4a	71	50.895	ENSLBEG00000018330	arid4a	51	83.333	Labrus_bergylta
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.853	ENSLAFG00000008653	ARID4A	99	84.853	Loxodonta_africana
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.261	ENSMFAG00000037044	ARID4A	100	85.182	Macaca_fascicularis
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.341	ENSMMUG00000003514	ARID4A	100	85.261	Macaca_mulatta
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.341	ENSMNEG00000037476	ARID4A	100	85.261	Macaca_nemestrina
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.420	ENSMLEG00000043095	ARID4A	100	85.341	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0017824	Arid4a	55	53.191	ENSMAMG00000006769	arid4a	59	55.731	Mastacembelus_armatus
MGP_CAROLIEiJ_G0017824	Arid4a	82	53.906	ENSMZEG00005017186	arid4a	73	58.506	Maylandia_zebra
MGP_CAROLIEiJ_G0017824	Arid4a	100	71.907	ENSMGAG00000013615	ARID4A	100	72.628	Meleagris_gallopavo
MGP_CAROLIEiJ_G0017824	Arid4a	99	79.924	ENSMAUG00000016160	Arid4a	97	79.861	Mesocricetus_auratus
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.964	ENSMICG00000011761	ARID4A	100	85.964	Microcebus_murinus
MGP_CAROLIEiJ_G0017824	Arid4a	100	87.470	ENSMOCG00000010098	Arid4a	100	87.232	Microtus_ochrogaster
MGP_CAROLIEiJ_G0017824	Arid4a	100	74.825	ENSMODG00000007881	ARID4A	100	74.981	Monodelphis_domestica
MGP_CAROLIEiJ_G0017824	Arid4a	100	98.493	ENSMUSG00000048118	Arid4a	100	98.493	Mus_musculus
MGP_CAROLIEiJ_G0017824	Arid4a	100	96.508	MGP_PahariEiJ_G0029580	Arid4a	100	96.508	Mus_pahari
MGP_CAROLIEiJ_G0017824	Arid4a	100	98.414	MGP_SPRETEiJ_G0018669	Arid4a	100	98.414	Mus_spretus
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.420	ENSMPUG00000006137	ARID4A	100	85.420	Mustela_putorius_furo
MGP_CAROLIEiJ_G0017824	Arid4a	99	83.841	ENSMLUG00000012354	ARID4A	99	83.841	Myotis_lucifugus
MGP_CAROLIEiJ_G0017824	Arid4a	100	82.622	ENSNGAG00000015701	Arid4a	99	82.543	Nannospalax_galili
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.103	ENSNLEG00000013149	ARID4A	100	85.103	Nomascus_leucogenys
MGP_CAROLIEiJ_G0017824	Arid4a	99	75.560	ENSOPRG00000002859	ARID4A	71	87.879	Ochotona_princeps
MGP_CAROLIEiJ_G0017824	Arid4a	95	73.373	ENSODEG00000014309	-	99	71.563	Octodon_degus
MGP_CAROLIEiJ_G0017824	Arid4a	99	65.602	ENSOANG00000011836	ARID4A	99	70.248	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0017824	Arid4a	100	82.964	ENSOCUG00000001052	ARID4A	100	82.964	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0017824	Arid4a	66	67.548	ENSORLG00020001443	arid4a	71	83.333	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0017824	Arid4a	100	83.794	ENSOGAG00000000385	ARID4A	100	83.794	Otolemur_garnettii
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.281	ENSOARG00000021110	ARID4A	100	84.281	Ovis_aries
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.341	ENSPPAG00000042713	ARID4A	100	85.341	Pan_paniscus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.707	ENSPPRG00000009142	ARID4A	100	84.707	Panthera_pardus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.786	ENSPTIG00000007597	ARID4A	100	84.786	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.341	ENSPTRG00000006393	ARID4A	100	85.341	Pan_troglodytes
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.499	ENSPANG00000022390	ARID4A	100	85.420	Papio_anubis
MGP_CAROLIEiJ_G0017824	Arid4a	68	75.131	ENSPKIG00000015415	arid4a	82	75.131	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0017824	Arid4a	99	71.783	ENSPSIG00000014845	ARID4A	100	71.650	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0017824	Arid4a	100	87.787	ENSPEMG00000008231	Arid4a	100	87.946	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0017824	Arid4a	95	73.219	ENSPCIG00000017482	ARID4A	98	72.727	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.499	ENSPPYG00000005857	ARID4A	100	85.499	Pongo_abelii
MGP_CAROLIEiJ_G0017824	Arid4a	89	91.979	ENSPCAG00000002099	ARID4A	89	91.979	Procavia_capensis
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.975	ENSPCOG00000013924	ARID4A	100	85.975	Propithecus_coquereli
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.311	ENSPVAG00000003866	ARID4A	100	84.311	Pteropus_vampyrus
MGP_CAROLIEiJ_G0017824	Arid4a	82	53.906	ENSPNYG00000009221	arid4a	71	59.252	Pundamilia_nyererei
MGP_CAROLIEiJ_G0017824	Arid4a	100	91.190	ENSRNOG00000026239	Arid4a	100	91.508	Rattus_norvegicus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.877	ENSRBIG00000032944	ARID4A	99	84.877	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.420	ENSRROG00000034002	ARID4A	100	85.420	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.786	ENSSBOG00000027453	ARID4A	100	84.786	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0017824	Arid4a	99	76.010	ENSSHAG00000018032	ARID4A	99	76.010	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0017824	Arid4a	58	81.928	ENSSDUG00000000343	arid4a	63	54.508	Seriola_dumerili
MGP_CAROLIEiJ_G0017824	Arid4a	73	52.239	ENSSLDG00000022684	arid4a	86	67.665	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0017824	Arid4a	99	83.109	ENSSARG00000006966	ARID4A	100	83.109	Sorex_araneus
MGP_CAROLIEiJ_G0017824	Arid4a	99	70.699	ENSSPUG00000018360	ARID4A	100	70.644	Sphenodon_punctatus
MGP_CAROLIEiJ_G0017824	Arid4a	100	83.476	ENSSSCG00000005073	ARID4A	100	83.320	Sus_scrofa
MGP_CAROLIEiJ_G0017824	Arid4a	79	67.647	ENSTGUG00000013032	-	100	74.084	Taeniopygia_guttata
MGP_CAROLIEiJ_G0017824	Arid4a	76	58.157	ENSTNIG00000002593	arid4a	61	63.542	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0017824	Arid4a	99	75.660	ENSTBEG00000017302	ARID4A	82	81.095	Tupaia_belangeri
MGP_CAROLIEiJ_G0017824	Arid4a	100	83.597	ENSUAMG00000007706	ARID4A	99	83.597	Ursus_americanus
MGP_CAROLIEiJ_G0017824	Arid4a	100	84.309	ENSUMAG00000016791	ARID4A	99	84.309	Ursus_maritimus
MGP_CAROLIEiJ_G0017824	Arid4a	93	84.483	ENSVPAG00000003645	ARID4A	93	84.483	Vicugna_pacos
MGP_CAROLIEiJ_G0017824	Arid4a	100	85.261	ENSVVUG00000029542	ARID4A	100	85.261	Vulpes_vulpes
MGP_CAROLIEiJ_G0017824	Arid4a	100	58.008	ENSXETG00000011968	arid4a	73	72.917	Xenopus_tropicalis