EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018093 (Gene tree)
Gene ID: 110306401
Gene Symbol: Papola
Alias: PapIII|Plap
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 53467 bases
Position: chr12:100247374-100300840
Accession: 110306401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0033288	PAP_RNA-bind	PF04926.15	1.5e-25	1	1
MGP_CAROLIEiJ_P0033274	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_CAROLIEiJ_P0033277	PAP_RNA-bind	PF04926.15	1.1e-24	1	1
MGP_CAROLIEiJ_P0033284	PAP_RNA-bind	PF04926.15	1.2e-24	1	1
MGP_CAROLIEiJ_P0033287	PAP_RNA-bind	PF04926.15	9e-24	1	1
MGP_CAROLIEiJ_P0033275	PAP_RNA-bind	PF04926.15	6.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0033285	-	1168	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033277	-	2542	-	MGP_CAROLIEiJ_P0033277	693 (aa)	-	-
MGP_CAROLIEiJ_T0033276	-	726	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033275	-	2436	-	MGP_CAROLIEiJ_P0033275	732 (aa)	-	-
MGP_CAROLIEiJ_T0033274	-	4376	-	MGP_CAROLIEiJ_P0033274	739 (aa)	XP_021034172	UPI000A3152FD
MGP_CAROLIEiJ_T0033286	-	295	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033287	-	1506	-	MGP_CAROLIEiJ_P0033287	418 (aa)	-	-
MGP_CAROLIEiJ_T0033279	-	2223	-	MGP_CAROLIEiJ_P0033279	111 (aa)	-	UPI0001F796E7
MGP_CAROLIEiJ_T0033278	-	2072	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033282	-	529	-	MGP_CAROLIEiJ_P0033282	66 (aa)	-	UPI0001F796E9
MGP_CAROLIEiJ_T0033283	-	741	-	MGP_CAROLIEiJ_P0033283	23 (aa)	-	UPI0001F796EA
MGP_CAROLIEiJ_T0033280	-	809	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033281	-	4351	-	MGP_CAROLIEiJ_P0033281	168 (aa)	-	UPI0001F796E8
MGP_CAROLIEiJ_T0033289	-	564	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033288	-	966	-	MGP_CAROLIEiJ_P0033288	321 (aa)	-	-
MGP_CAROLIEiJ_T0033290	-	684	-	MGP_CAROLIEiJ_P0033290	119 (aa)	-	-
MGP_CAROLIEiJ_T0033284	-	2603	-	MGP_CAROLIEiJ_P0033284	718 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018093's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0018093	Papola	93	85.537	MGP_CAROLIEiJ_G0027962	Papolb	99	85.537
MGP_CAROLIEiJ_G0018093	Papola	98	61.264	MGP_CAROLIEiJ_G0016144	Papolg	97	81.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSG00000090060	PAPOLA	98	99.283	Homo_sapiens
MGP_CAROLIEiJ_G0018093	Papola	99	95.664	ENSAMEG00000014142	PAPOLA	99	95.664	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018093	Papola	99	90.108	ENSAPLG00000006645	PAPOLA	99	90.108	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018093	Papola	100	91.304	ENSACAG00000013474	PAPOLA	99	94.689	Anolis_carolinensis
MGP_CAROLIEiJ_G0018093	Papola	99	96.382	ENSANAG00000018274	PAPOLA	99	98.346	Aotus_nancymaae
MGP_CAROLIEiJ_G0018093	Papola	77	91.011	ENSANAG00000027941	-	98	91.011	Aotus_nancymaae
MGP_CAROLIEiJ_G0018093	Papola	100	73.257	ENSAMXG00000018141	papola	99	84.740	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018093	Papola	100	96.970	ENSBTAG00000004054	PAPOLA	100	96.970	Bos_taurus
MGP_CAROLIEiJ_G0018093	Papola	100	95.994	ENSCJAG00000006512	PAPOLA	99	98.346	Callithrix_jacchus
MGP_CAROLIEiJ_G0018093	Papola	100	95.302	ENSCAFG00000017783	PAPOLA	100	95.302	Canis_familiaris
MGP_CAROLIEiJ_G0018093	Papola	100	95.805	ENSCAFG00020011550	PAPOLA	100	95.805	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018093	Papola	100	95.535	ENSCHIG00000025004	-	100	95.535	Capra_hircus
MGP_CAROLIEiJ_G0018093	Papola	99	95.942	ENSTSYG00000012384	PAPOLA	99	95.942	Carlito_syrichta
MGP_CAROLIEiJ_G0018093	Papola	100	93.478	ENSCPOG00000002648	PAPOLA	100	92.208	Cavia_porcellus
MGP_CAROLIEiJ_G0018093	Papola	100	95.034	ENSCCAG00000025120	PAPOLA	98	97.782	Cebus_capucinus
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSCATG00000018815	PAPOLA	99	98.696	Cercocebus_atys
MGP_CAROLIEiJ_G0018093	Papola	100	96.392	ENSCLAG00000016342	PAPOLA	100	96.392	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSCSAG00000010516	PAPOLA	100	95.168	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018093	Papola	86	79.564	ENSCHOG00000001115	PAPOLA	72	81.818	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018093	Papola	100	92.162	ENSCPBG00000024125	PAPOLA	100	92.162	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018093	Papola	100	92.073	ENSCANG00000000159	PAPOLA	100	89.906	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018093	Papola	100	98.413	ENSCGRG00001022693	-	100	98.413	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018093	Papola	100	91.925	ENSCGRG00001000229	-	99	90.997	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018093	Papola	100	86.957	ENSCGRG00001002732	-	99	85.772	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018093	Papola	98	81.818	ENSCGRG00000001888	-	96	81.956	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018093	Papola	100	91.615	ENSCGRG00000000257	-	100	85.269	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018093	Papola	100	97.571	ENSCGRG00000003664	-	100	98.406	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018093	Papola	69	53.846	ENSCSEG00000001841	-	71	53.846	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018093	Papola	100	70.523	ENSDARG00000009585	papola	100	70.386	Danio_rerio
MGP_CAROLIEiJ_G0018093	Papola	100	93.769	ENSDORG00000013415	-	100	89.195	Dipodomys_ordii
MGP_CAROLIEiJ_G0018093	Papola	100	83.851	ENSETEG00000004889	PAPOLA	100	82.361	Echinops_telfairi
MGP_CAROLIEiJ_G0018093	Papola	100	68.568	ENSELUG00000018972	papola	100	68.309	Esox_lucius
MGP_CAROLIEiJ_G0018093	Papola	100	97.258	ENSFCAG00000006784	PAPOLA	100	97.258	Felis_catus
MGP_CAROLIEiJ_G0018093	Papola	99	93.750	ENSFALG00000002547	PAPOLA	98	87.237	Ficedula_albicollis
MGP_CAROLIEiJ_G0018093	Papola	99	94.928	ENSFDAG00000010370	PAPOLA	100	94.928	Fukomys_damarensis
MGP_CAROLIEiJ_G0018093	Papola	99	62.346	ENSGMOG00000010209	papola	100	66.667	Gadus_morhua
MGP_CAROLIEiJ_G0018093	Papola	100	89.716	ENSGALG00000033099	PAPOLA	100	89.716	Gallus_gallus
MGP_CAROLIEiJ_G0018093	Papola	69	53.958	ENSGACG00000006142	-	100	53.542	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018093	Papola	96	94.411	ENSGAGG00000020500	PAPOLA	99	94.411	Gopherus_agassizii
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSGGOG00000006287	PAPOLA	100	95.168	Gorilla_gorilla
MGP_CAROLIEiJ_G0018093	Papola	100	95.815	ENSHGLG00000007909	-	100	95.815	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018093	Papola	100	82.670	ENSHGLG00000017457	-	100	82.289	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018093	Papola	100	82.298	ENSHGLG00000007467	-	100	76.913	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018093	Papola	100	95.671	ENSHGLG00100017273	PAPOLA	100	95.671	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018093	Papola	100	68.568	ENSIPUG00000005919	papola	100	68.147	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018093	Papola	100	96.970	ENSSTOG00000011471	PAPOLA	100	96.970	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018093	Papola	99	96.232	ENSJJAG00000024340	Papola	100	96.232	Jaculus_jaculus
MGP_CAROLIEiJ_G0018093	Papola	99	76.518	ENSLACG00000018136	PAPOLA	99	76.518	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018093	Papola	99	66.400	ENSLOCG00000008632	papola	99	66.445	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018093	Papola	99	94.701	ENSLAFG00000000946	PAPOLA	99	94.701	Loxodonta_africana
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSMFAG00000001792	PAPOLA	99	98.521	Macaca_fascicularis
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSMMUG00000018610	PAPOLA	100	95.983	Macaca_mulatta
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSMNEG00000043747	PAPOLA	99	97.426	Macaca_nemestrina
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSMLEG00000032066	PAPOLA	100	95.168	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018093	Papola	100	88.199	ENSMGAG00000013228	-	100	88.728	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018093	Papola	100	98.268	ENSMAUG00000017178	Papola	100	98.268	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018093	Papola	100	96.830	ENSMICG00000010347	PAPOLA	100	96.830	Microcebus_murinus
MGP_CAROLIEiJ_G0018093	Papola	100	98.701	ENSMOCG00000021670	Papola	100	98.701	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018093	Papola	99	80.972	ENSMODG00000001969	-	99	80.972	Monodelphis_domestica
MGP_CAROLIEiJ_G0018093	Papola	100	94.723	ENSMODG00000012887	-	100	94.723	Monodelphis_domestica
MGP_CAROLIEiJ_G0018093	Papola	100	99.423	ENSMUSG00000021111	Papola	100	99.423	Mus_musculus
MGP_CAROLIEiJ_G0018093	Papola	100	99.423	MGP_PahariEiJ_G0029850	Papola	100	99.423	Mus_pahari
MGP_CAROLIEiJ_G0018093	Papola	100	99.567	MGP_SPRETEiJ_G0018943	Papola	100	99.567	Mus_spretus
MGP_CAROLIEiJ_G0018093	Papola	100	96.482	ENSMPUG00000003054	PAPOLA	100	96.482	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018093	Papola	100	94.046	ENSMLUG00000010922	PAPOLA	100	94.046	Myotis_lucifugus
MGP_CAROLIEiJ_G0018093	Papola	100	96.825	ENSNGAG00000022172	Papola	100	96.825	Nannospalax_galili
MGP_CAROLIEiJ_G0018093	Papola	99	90.571	ENSNLEG00000000625	PAPOLA	100	90.571	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018093	Papola	74	88.525	ENSMEUG00000007831	-	74	83.465	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018093	Papola	100	91.641	ENSOPRG00000007625	PAPOLA	100	90.014	Ochotona_princeps
MGP_CAROLIEiJ_G0018093	Papola	68	54.008	ENSONIG00000001062	-	96	54.008	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018093	Papola	99	96.093	ENSOANG00000013812	PAPOLA	99	96.093	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0018093	Papola	99	92.673	ENSOCUG00000011531	PAPOLA	99	92.673	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018093	Papola	100	96.081	ENSOGAG00000004611	PAPOLA	100	96.081	Otolemur_garnettii
MGP_CAROLIEiJ_G0018093	Papola	100	96.076	ENSOARG00000016579	-	100	96.076	Ovis_aries
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSPPAG00000030505	PAPOLA	100	95.168	Pan_paniscus
MGP_CAROLIEiJ_G0018093	Papola	100	96.346	ENSPPRG00000008616	PAPOLA	100	96.346	Panthera_pardus
MGP_CAROLIEiJ_G0018093	Papola	99	96.332	ENSPTIG00000018852	PAPOLA	99	96.332	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSPTRG00000006704	PAPOLA	100	95.168	Pan_troglodytes
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSPANG00000025582	PAPOLA	98	98.696	Papio_anubis
MGP_CAROLIEiJ_G0018093	Papola	96	74.359	ENSPKIG00000014471	papola	100	70.065	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018093	Papola	100	92.703	ENSPSIG00000014157	PAPOLA	87	92.703	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018093	Papola	100	98.557	ENSPEMG00000000043	Papola	100	98.557	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018093	Papola	100	94.459	ENSPCIG00000013234	PAPOLA	100	95.197	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018093	Papola	100	92.752	ENSPPYG00000006128	PAPOLA	100	92.752	Pongo_abelii
MGP_CAROLIEiJ_G0018093	Papola	100	90.683	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
MGP_CAROLIEiJ_G0018093	Papola	100	93.478	ENSPCOG00000022117	PAPOLA	99	93.054	Propithecus_coquereli
MGP_CAROLIEiJ_G0018093	Papola	100	94.993	ENSPVAG00000013925	PAPOLA	100	94.993	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018093	Papola	100	71.989	ENSPNAG00000010467	papola	100	72.316	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018093	Papola	100	98.241	ENSRNOG00000004827	Papola	100	98.241	Rattus_norvegicus
MGP_CAROLIEiJ_G0018093	Papola	99	95.552	ENSRBIG00000038490	PAPOLA	100	95.552	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018093	Papola	100	95.168	ENSRROG00000025545	PAPOLA	100	95.168	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018093	Papola	99	95.839	ENSSBOG00000024061	PAPOLA	100	95.839	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018093	Papola	99	94.158	ENSSHAG00000015211	PAPOLA	99	94.158	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018093	Papola	100	70.862	ENSSFOG00015004431	papola	99	84.629	Scleropages_formosus
MGP_CAROLIEiJ_G0018093	Papola	98	46.657	ENSSDUG00000018247	-	97	46.408	Seriola_dumerili
MGP_CAROLIEiJ_G0018093	Papola	100	91.757	ENSSPUG00000005835	PAPOLA	100	91.757	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018093	Papola	100	96.970	ENSSSCG00000002505	-	100	96.970	Sus_scrofa
MGP_CAROLIEiJ_G0018093	Papola	99	89.959	ENSTGUG00000012687	PAPOLA	99	89.959	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018093	Papola	75	87.772	ENSTBEG00000000194	PAPOLA	75	87.772	Tupaia_belangeri
MGP_CAROLIEiJ_G0018093	Papola	79	96.875	ENSTTRG00000005717	PAPOLA	74	96.875	Tursiops_truncatus
MGP_CAROLIEiJ_G0018093	Papola	61	98.815	ENSUAMG00000025737	PAPOLA	98	98.815	Ursus_americanus
MGP_CAROLIEiJ_G0018093	Papola	99	95.380	ENSVPAG00000006464	PAPOLA	100	95.380	Vicugna_pacos
MGP_CAROLIEiJ_G0018093	Papola	100	96.970	ENSVVUG00000028340	PAPOLA	100	96.970	Vulpes_vulpes
MGP_CAROLIEiJ_G0018093	Papola	100	83.356	ENSXETG00000013949	papola	100	83.356	Xenopus_tropicalis