EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018236 (Gene tree)
Gene ID: 110307855
Gene Symbol: Arid4b
Alias: 6330417L24Rik|6720480E17Rik|BRCAA1|RBBP1L1|Rbp1l1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 143935 bases
Position: chr13:9687381-9831315
Accession: 110307855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0033715	Tudor-knot	PF11717.8	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0033721	-	745	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033720	-	4640	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033718	-	663	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033719	-	4182	-	MGP_CAROLIEiJ_P0033719	617 (aa)	-	-
MGP_CAROLIEiJ_T0033714	-	5780	-	MGP_CAROLIEiJ_P0033714	1227 (aa)	-	-
MGP_CAROLIEiJ_T0033715	-	5861	XM_021180100	MGP_CAROLIEiJ_P0033715	1314 (aa)	XP_021035759	UPI000A318FEB
MGP_CAROLIEiJ_T0033716	-	5845	-	MGP_CAROLIEiJ_P0033716	1227 (aa)	-	-
MGP_CAROLIEiJ_T0033717	-	3015	-	MGP_CAROLIEiJ_P0033717	473 (aa)	-	-
MGP_CAROLIEiJ_T0033712	-	571	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033713	-	1802	-	MGP_CAROLIEiJ_P0033713	540 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.202	ENSG00000054267	ARID4B	100	93.789	Homo_sapiens
MGP_CAROLIEiJ_G0018236	Arid4b	99	89.346	ENSAMEG00000008801	ARID4B	100	88.889	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018236	Arid4b	64	73.301	ENSACIG00000006313	tomm20a	98	72.573	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018236	Arid4b	99	52.374	ENSATEG00000014930	tomm20a	100	51.520	Anabas_testudineus
MGP_CAROLIEiJ_G0018236	Arid4b	100	75.509	ENSAPLG00000004422	ARID4B	100	75.735	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018236	Arid4b	99	70.963	ENSACAG00000001289	ARID4B	100	72.079	Anolis_carolinensis
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.886	ENSANAG00000038088	ARID4B	100	89.734	Aotus_nancymaae
MGP_CAROLIEiJ_G0018236	Arid4b	72	88.000	ENSAMXG00000003657	tomm20a	86	67.470	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018236	Arid4b	100	87.529	ENSBTAG00000000222	ARID4B	100	87.529	Bos_taurus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.737	ENSCJAG00000018055	ARID4B	100	88.508	Callithrix_jacchus
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.278	ENSCAFG00000011439	ARID4B	100	88.821	Canis_familiaris
MGP_CAROLIEiJ_G0018236	Arid4b	99	88.906	ENSCAFG00020027130	ARID4B	99	88.447	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018236	Arid4b	99	85.092	ENSCHIG00000020742	ARID4B	100	85.015	Capra_hircus
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.582	ENSTSYG00000010028	ARID4B	100	89.506	Carlito_syrichta
MGP_CAROLIEiJ_G0018236	Arid4b	99	87.205	ENSCPOG00000034766	ARID4B	100	87.433	Cavia_porcellus
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.734	ENSCCAG00000021520	ARID4B	100	89.582	Cebus_capucinus
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.038	ENSCATG00000042166	ARID4B	100	89.886	Cercocebus_atys
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.049	ENSCLAG00000003255	ARID4B	100	88.745	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.190	ENSCSAG00000010069	ARID4B	100	90.038	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018236	Arid4b	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018236	Arid4b	100	75.076	ENSCPBG00000004501	ARID4B	100	75.755	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018236	Arid4b	100	86.464	ENSCANG00000027498	ARID4B	100	81.236	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018236	Arid4b	100	94.297	ENSCGRG00001014397	Arid4b	100	94.525	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018236	Arid4b	99	94.288	ENSCGRG00000004910	Arid4b	100	94.516	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018236	Arid4b	56	87.752	ENSDNOG00000005711	ARID4B	100	87.752	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018236	Arid4b	99	88.584	ENSDORG00000006422	Arid4b	100	88.584	Dipodomys_ordii
MGP_CAROLIEiJ_G0018236	Arid4b	89	87.717	ENSETEG00000005596	ARID4B	92	87.149	Echinops_telfairi
MGP_CAROLIEiJ_G0018236	Arid4b	99	86.748	ENSEASG00005000677	ARID4B	99	88.043	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018236	Arid4b	99	88.576	ENSECAG00000017836	ARID4B	99	88.957	Equus_caballus
MGP_CAROLIEiJ_G0018236	Arid4b	83	100.000	ENSEEUG00000005378	ARID4B	86	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.213	ENSFCAG00000030096	ARID4B	100	87.985	Felis_catus
MGP_CAROLIEiJ_G0018236	Arid4b	100	76.737	ENSFALG00000013548	ARID4B	98	76.737	Ficedula_albicollis
MGP_CAROLIEiJ_G0018236	Arid4b	99	88.347	ENSFDAG00000014194	ARID4B	100	87.510	Fukomys_damarensis
MGP_CAROLIEiJ_G0018236	Arid4b	54	60.888	ENSFHEG00000003798	tomm20a	54	60.428	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018236	Arid4b	90	52.303	ENSGMOG00000018747	tomm20a	92	52.165	Gadus_morhua
MGP_CAROLIEiJ_G0018236	Arid4b	99	53.273	ENSGACG00000004298	tomm20a	100	52.074	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018236	Arid4b	100	74.169	ENSGAGG00000020544	ARID4B	98	74.116	Gopherus_agassizii
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.734	ENSGGOG00000022080	ARID4B	100	89.582	Gorilla_gorilla
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.821	ENSHGLG00000012546	ARID4B	100	88.517	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.821	ENSHGLG00100015436	ARID4B	100	88.517	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018236	Arid4b	91	73.608	ENSHCOG00000010376	tomm20a	95	73.786	Hippocampus_comes
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.058	ENSSTOG00000002810	ARID4B	100	89.134	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018236	Arid4b	100	86.692	ENSJJAG00000021368	Arid4b	100	85.932	Jaculus_jaculus
MGP_CAROLIEiJ_G0018236	Arid4b	88	52.439	ENSKMAG00000010987	tomm20a	97	86.139	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018236	Arid4b	99	87.966	ENSLAFG00000014295	ARID4B	100	87.433	Loxodonta_africana
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.038	ENSMFAG00000044016	ARID4B	100	89.886	Macaca_fascicularis
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.038	ENSMMUG00000007141	ARID4B	100	89.886	Macaca_mulatta
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.582	ENSMNEG00000014840	ARID4B	100	89.354	Macaca_nemestrina
MGP_CAROLIEiJ_G0018236	Arid4b	99	90.138	ENSMLEG00000033583	ARID4B	100	89.985	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018236	Arid4b	100	76.284	ENSMGAG00000011896	ARID4B	100	76.226	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.129	ENSMICG00000016358	ARID4B	100	89.977	Microcebus_murinus
MGP_CAROLIEiJ_G0018236	Arid4b	88	57.873	ENSMMOG00000000561	tomm20a	69	74.515	Mola_mola
MGP_CAROLIEiJ_G0018236	Arid4b	100	82.308	ENSMODG00000008417	ARID4B	100	81.853	Monodelphis_domestica
MGP_CAROLIEiJ_G0018236	Arid4b	100	98.097	ENSMUSG00000039219	Arid4b	100	98.097	Mus_musculus
MGP_CAROLIEiJ_G0018236	Arid4b	100	98.250	MGP_PahariEiJ_G0019286	Arid4b	100	98.250	Mus_pahari
MGP_CAROLIEiJ_G0018236	Arid4b	100	98.097	MGP_SPRETEiJ_G0019094	Arid4b	100	98.097	Mus_spretus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.137	ENSMPUG00000002906	ARID4B	100	87.833	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018236	Arid4b	99	86.626	ENSMLUG00000016232	ARID4B	100	86.170	Myotis_lucifugus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.266	ENSNGAG00000014629	Arid4b	100	87.964	Nannospalax_galili
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.038	ENSNLEG00000002665	ARID4B	100	89.886	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.745	ENSODEG00000005373	ARID4B	100	88.289	Octodon_degus
MGP_CAROLIEiJ_G0018236	Arid4b	99	89.566	ENSOCUG00000006605	ARID4B	100	89.566	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018236	Arid4b	100	52.890	ENSORLG00000012510	tomm20a	100	53.102	Oryzias_latipes
MGP_CAROLIEiJ_G0018236	Arid4b	89	74.519	ENSORLG00020013988	tomm20a	99	74.217	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018236	Arid4b	89	75.121	ENSORLG00015022835	tomm20a	99	74.818	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018236	Arid4b	99	80.609	ENSOGAG00000012476	ARID4B	55	80.589	Otolemur_garnettii
MGP_CAROLIEiJ_G0018236	Arid4b	99	86.662	ENSOARG00000003481	ARID4B	97	86.662	Ovis_aries
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.658	ENSPPAG00000031651	ARID4B	100	89.430	Pan_paniscus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.213	ENSPPRG00000013739	ARID4B	100	87.681	Panthera_pardus
MGP_CAROLIEiJ_G0018236	Arid4b	100	86.312	ENSPTIG00000012520	ARID4B	100	85.779	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.810	ENSPTRG00000002129	ARID4B	100	89.582	Pan_troglodytes
MGP_CAROLIEiJ_G0018236	Arid4b	85	88.320	ENSPTRG00000048786	-	95	88.050	Pan_troglodytes
MGP_CAROLIEiJ_G0018236	Arid4b	99	89.566	ENSPANG00000013611	ARID4B	100	89.414	Papio_anubis
MGP_CAROLIEiJ_G0018236	Arid4b	93	74.676	ENSPSIG00000011632	ARID4B	99	75.223	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018236	Arid4b	100	81.169	ENSPCIG00000029756	ARID4B	100	81.245	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.582	ENSPPYG00000000098	ARID4B	100	89.354	Pongo_abelii
MGP_CAROLIEiJ_G0018236	Arid4b	100	89.818	ENSPCOG00000024328	ARID4B	100	89.742	Propithecus_coquereli
MGP_CAROLIEiJ_G0018236	Arid4b	100	84.106	ENSPVAG00000015159	ARID4B	100	83.422	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018236	Arid4b	89	96.137	ENSRNOG00000016391	LOC100912163	99	96.137	Rattus_norvegicus
MGP_CAROLIEiJ_G0018236	Arid4b	99	82.178	ENSRBIG00000042029	ARID4B	100	81.721	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018236	Arid4b	100	90.038	ENSRROG00000045203	ARID4B	100	89.886	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018236	Arid4b	83	88.655	ENSSBOG00000020196	ARID4B	100	88.472	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018236	Arid4b	100	82.121	ENSSHAG00000015214	ARID4B	100	82.500	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018236	Arid4b	76	41.563	ENSSFOG00015008923	tomm20a	88	84.375	Scleropages_formosus
MGP_CAROLIEiJ_G0018236	Arid4b	54	58.391	ENSSFOG00015000132	arid4b	55	57.162	Scleropages_formosus
MGP_CAROLIEiJ_G0018236	Arid4b	100	75.547	ENSSPUG00000015466	ARID4B	98	75.094	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.365	ENSSSCG00000010156	ARID4B	100	87.985	Sus_scrofa
MGP_CAROLIEiJ_G0018236	Arid4b	100	77.069	ENSTGUG00000010246	ARID4B	100	76.386	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018236	Arid4b	56	45.902	ENSTRUG00000002893	tomm20a	85	45.074	Takifugu_rubripes
MGP_CAROLIEiJ_G0018236	Arid4b	80	83.940	ENSTBEG00000003961	ARID4B	80	82.441	Tupaia_belangeri
MGP_CAROLIEiJ_G0018236	Arid4b	100	88.137	ENSTTRG00000002228	ARID4B	100	87.376	Tursiops_truncatus
MGP_CAROLIEiJ_G0018236	Arid4b	99	88.290	ENSUMAG00000006905	ARID4B	100	87.664	Ursus_maritimus
MGP_CAROLIEiJ_G0018236	Arid4b	69	90.500	ENSVPAG00000006841	ARID4B	69	90.500	Vicugna_pacos
MGP_CAROLIEiJ_G0018236	Arid4b	99	87.827	ENSVVUG00000008154	ARID4B	99	87.827	Vulpes_vulpes
MGP_CAROLIEiJ_G0018236	Arid4b	100	61.758	ENSXETG00000024651	arid4b	100	61.446	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018236	Arid4b	99	50.808	ENSXMAG00000006538	tomm20a	100	51.570	Xiphophorus_maculatus