EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018354 (Gene tree)
Gene ID: 110307982
Gene Symbol: Tdp2
Alias: D13Ertd656e|Ttrap
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9197 bases
Position: chr13:20631018-20640214
Accession: 110307982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0033940	Exo_endo_phos	PF03372.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0033941	-	541	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0033940	-	1948	XM_021180297	MGP_CAROLIEiJ_P0033940	370 (aa)	XP_021035956	UPI000A3182F4

Gene Model

Click here to download MGP_CAROLIEiJ_G0018354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	ENSG00000111802	TDP2	91	74.101	Homo_sapiens
MGP_CAROLIEiJ_G0018354	Tdp2	67	55.118	ENSAPOG00000018379	-	89	55.118	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018354	Tdp2	75	74.643	ENSAMEG00000010230	TDP2	100	74.643	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018354	Tdp2	71	53.008	ENSAPEG00000004208	-	95	53.008	Amphiprion_percula
MGP_CAROLIEiJ_G0018354	Tdp2	68	52.140	ENSATEG00000010663	-	84	51.938	Anabas_testudineus
MGP_CAROLIEiJ_G0018354	Tdp2	91	60.947	ENSACAG00000002332	TDP2	95	60.114	Anolis_carolinensis
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.915	ENSANAG00000020033	TDP2	95	68.605	Aotus_nancymaae
MGP_CAROLIEiJ_G0018354	Tdp2	67	54.150	ENSACLG00000016132	tdp2b	94	50.360	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018354	Tdp2	67	56.746	ENSACLG00000016148	tdp2b	89	56.746	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018354	Tdp2	67	54.150	ENSACLG00000016174	tdp2b	94	50.000	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018354	Tdp2	92	49.326	ENSAMXG00000011775	tdp2b	98	49.326	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018354	Tdp2	69	51.923	ENSAMXG00000036549	tdp2a	84	51.923	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018354	Tdp2	96	65.556	ENSBTAG00000000365	TDP2	95	67.341	Bos_taurus
MGP_CAROLIEiJ_G0018354	Tdp2	88	32.523	WBGene00013405	tdpt-1	85	33.333	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0018354	Tdp2	96	65.738	ENSCJAG00000021963	-	95	67.151	Callithrix_jacchus
MGP_CAROLIEiJ_G0018354	Tdp2	96	66.017	ENSCJAG00000006074	TDP2	91	73.381	Callithrix_jacchus
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.529	ENSCAFG00000010428	TDP2	96	75.357	Canis_familiaris
MGP_CAROLIEiJ_G0018354	Tdp2	75	75.357	ENSCAFG00020009994	TDP2	96	75.357	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018354	Tdp2	78	72.881	ENSCHIG00000015294	-	95	75.177	Capra_hircus
MGP_CAROLIEiJ_G0018354	Tdp2	82	68.506	ENSTSYG00000037199	TDP2	99	68.831	Carlito_syrichta
MGP_CAROLIEiJ_G0018354	Tdp2	91	69.412	ENSCPOG00000006390	TDP2	96	68.895	Cavia_porcellus
MGP_CAROLIEiJ_G0018354	Tdp2	94	67.908	ENSCCAG00000022734	TDP2	91	74.460	Cebus_capucinus
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.915	ENSCATG00000022076	TDP2	91	75.180	Cercocebus_atys
MGP_CAROLIEiJ_G0018354	Tdp2	95	65.374	ENSCLAG00000002072	TDP2	95	67.742	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018354	Tdp2	94	67.908	ENSCSAG00000007769	TDP2	97	68.012	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018354	Tdp2	91	59.587	ENSCPBG00000006551	TDP2	87	59.412	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.622	ENSCANG00000040122	TDP2	92	74.820	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018354	Tdp2	100	84.595	ENSCGRG00001000384	Tdp2	100	84.718	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018354	Tdp2	92	81.525	ENSCGRG00000010250	Tdp2	96	81.322	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018354	Tdp2	91	49.148	ENSCVAG00000003114	tdp2b	96	49.148	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018354	Tdp2	90	48.626	ENSDARG00000035954	tdp2b	95	48.626	Danio_rerio
MGP_CAROLIEiJ_G0018354	Tdp2	66	50.204	ENSDARG00000069941	tdp2a	55	50.204	Danio_rerio
MGP_CAROLIEiJ_G0018354	Tdp2	98	65.479	ENSDNOG00000044082	TDP2	94	66.860	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018354	Tdp2	74	72.302	ENSETEG00000019096	TDP2	100	72.302	Echinops_telfairi
MGP_CAROLIEiJ_G0018354	Tdp2	70	52.471	ENSEBUG00000006535	tdp2a	61	52.471	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018354	Tdp2	91	67.742	ENSEASG00005007656	TDP2	95	67.442	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018354	Tdp2	91	67.449	ENSECAG00000014264	TDP2	95	67.151	Equus_caballus
MGP_CAROLIEiJ_G0018354	Tdp2	91	66.471	ENSEEUG00000010776	TDP2	96	65.607	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018354	Tdp2	94	49.606	ENSELUG00000016449	tdp2b	95	50.546	Esox_lucius
MGP_CAROLIEiJ_G0018354	Tdp2	74	46.667	ENSELUG00000009321	tdp2a	89	46.667	Esox_lucius
MGP_CAROLIEiJ_G0018354	Tdp2	96	65.278	ENSFCAG00000025612	TDP2	95	67.442	Felis_catus
MGP_CAROLIEiJ_G0018354	Tdp2	91	55.294	ENSFALG00000004710	TDP2	94	55.425	Ficedula_albicollis
MGP_CAROLIEiJ_G0018354	Tdp2	74	74.460	ENSFDAG00000006512	TDP2	96	74.460	Fukomys_damarensis
MGP_CAROLIEiJ_G0018354	Tdp2	69	51.341	ENSFHEG00000013560	-	89	51.145	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018354	Tdp2	98	57.766	ENSGALG00000013637	TDP2	94	59.551	Gallus_gallus
MGP_CAROLIEiJ_G0018354	Tdp2	95	58.101	ENSGAGG00000002853	TDP2	87	59.706	Gopherus_agassizii
MGP_CAROLIEiJ_G0018354	Tdp2	91	67.742	ENSGGOG00000014237	TDP2	91	73.741	Gorilla_gorilla
MGP_CAROLIEiJ_G0018354	Tdp2	99	50.260	ENSHBUG00000002714	tdp2b	94	52.571	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018354	Tdp2	53	58.673	ENSHBUG00000005421	-	79	60.209	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018354	Tdp2	95	65.915	ENSHGLG00000008655	TDP2	96	67.055	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018354	Tdp2	95	65.915	ENSHGLG00100019087	TDP2	96	67.055	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018354	Tdp2	90	51.130	ENSIPUG00000013691	tdp2b	94	51.412	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018354	Tdp2	92	68.824	ENSJJAG00000021685	Tdp2	98	68.824	Jaculus_jaculus
MGP_CAROLIEiJ_G0018354	Tdp2	68	52.326	ENSKMAG00000015485	-	83	52.326	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018354	Tdp2	91	54.755	ENSLACG00000008852	TDP2	95	54.755	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018354	Tdp2	74	58.909	ENSLOCG00000005817	tdp2b	98	58.909	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018354	Tdp2	91	69.208	ENSLAFG00000002567	TDP2	99	68.588	Loxodonta_africana
MGP_CAROLIEiJ_G0018354	Tdp2	91	69.208	ENSMFAG00000045296	TDP2	91	75.540	Macaca_fascicularis
MGP_CAROLIEiJ_G0018354	Tdp2	91	69.208	ENSMMUG00000009803	TDP2	96	68.895	Macaca_mulatta
MGP_CAROLIEiJ_G0018354	Tdp2	91	69.208	ENSMNEG00000038003	TDP2	91	75.540	Macaca_nemestrina
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.915	ENSMLEG00000028883	TDP2	91	75.180	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018354	Tdp2	93	49.020	ENSMAMG00000013654	tdp2b	94	51.032	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018354	Tdp2	74	50.719	ENSMZEG00005004126	tdp2b	91	50.719	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	60	51.339	ENSMZEG00005003980	-	81	47.390	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	65	54.878	ENSMZEG00005004055	tdp2b	81	54.878	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	76	52.098	ENSMZEG00005004077	tdp2b	97	52.098	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	99	49.479	ENSMZEG00005003950	tdp2b	95	51.567	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	67	51.779	ENSMZEG00005004103	tdp2b	84	51.779	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	75	53.004	ENSMZEG00005004153	tdp2b	99	53.004	Maylandia_zebra
MGP_CAROLIEiJ_G0018354	Tdp2	98	58.904	ENSMGAG00000008014	TDP2	93	60.745	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018354	Tdp2	100	85.135	ENSMAUG00000014451	Tdp2	100	85.255	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018354	Tdp2	97	66.116	ENSMICG00000000039	TDP2	94	74.460	Microcebus_murinus
MGP_CAROLIEiJ_G0018354	Tdp2	100	83.514	ENSMOCG00000002823	Tdp2	100	83.514	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018354	Tdp2	84	60.125	ENSMODG00000011653	TDP2	95	60.256	Monodelphis_domestica
MGP_CAROLIEiJ_G0018354	Tdp2	66	53.200	ENSMALG00000005368	-	84	53.200	Monopterus_albus
MGP_CAROLIEiJ_G0018354	Tdp2	100	96.216	ENSMUSG00000035958	Tdp2	100	96.216	Mus_musculus
MGP_CAROLIEiJ_G0018354	Tdp2	100	91.892	MGP_PahariEiJ_G0019417	Tdp2	100	91.892	Mus_pahari
MGP_CAROLIEiJ_G0018354	Tdp2	100	96.237	MGP_SPRETEiJ_G0019220	Tdp2	100	96.237	Mus_spretus
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.513	ENSMPUG00000004516	TDP2	96	68.208	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018354	Tdp2	94	62.784	ENSMLUG00000013506	TDP2	94	64.118	Myotis_lucifugus
MGP_CAROLIEiJ_G0018354	Tdp2	99	73.514	ENSNGAG00000001375	Tdp2	93	77.126	Nannospalax_galili
MGP_CAROLIEiJ_G0018354	Tdp2	92	68.895	ENSNLEG00000002447	TDP2	97	68.895	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018354	Tdp2	93	67.143	ENSOPRG00000016299	TDP2	99	67.143	Ochotona_princeps
MGP_CAROLIEiJ_G0018354	Tdp2	74	75.899	ENSODEG00000014018	TDP2	95	75.899	Octodon_degus
MGP_CAROLIEiJ_G0018354	Tdp2	91	67.055	ENSOCUG00000013773	TDP2	94	66.860	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018354	Tdp2	68	50.195	ENSORLG00000001661	-	94	50.195	Oryzias_latipes
MGP_CAROLIEiJ_G0018354	Tdp2	68	50.195	ENSORLG00020004634	-	94	50.195	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018354	Tdp2	68	45.736	ENSORLG00015008190	-	93	45.736	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018354	Tdp2	78	47.782	ENSOMEG00000015899	-	93	52.400	Oryzias_melastigma
MGP_CAROLIEiJ_G0018354	Tdp2	97	65.289	ENSOGAG00000025303	TDP2	95	65.994	Otolemur_garnettii
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	ENSPPAG00000029023	TDP2	92	74.101	Pan_paniscus
MGP_CAROLIEiJ_G0018354	Tdp2	96	65.000	ENSPPRG00000015398	TDP2	95	67.151	Panthera_pardus
MGP_CAROLIEiJ_G0018354	Tdp2	74	74.460	ENSPTIG00000018574	TDP2	95	74.460	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	ENSPTRG00000017778	TDP2	91	74.101	Pan_troglodytes
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.622	ENSPANG00000017590	TDP2	91	74.820	Papio_anubis
MGP_CAROLIEiJ_G0018354	Tdp2	93	50.278	ENSPKIG00000006483	tdp2b	95	51.136	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018354	Tdp2	78	62.284	ENSPSIG00000004948	TDP2	99	62.284	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018354	Tdp2	100	86.757	ENSPEMG00000001788	Tdp2	100	86.757	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018354	Tdp2	67	46.816	ENSPMAG00000001570	tdp2b	97	46.816	Petromyzon_marinus
MGP_CAROLIEiJ_G0018354	Tdp2	91	59.420	ENSPCIG00000007316	TDP2	91	58.974	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018354	Tdp2	66	51.200	ENSPFOG00000017990	-	90	51.200	Poecilia_formosa
MGP_CAROLIEiJ_G0018354	Tdp2	66	50.598	ENSPLAG00000019439	-	79	50.800	Poecilia_latipinna
MGP_CAROLIEiJ_G0018354	Tdp2	66	51.600	ENSPMEG00000010824	-	84	51.600	Poecilia_mexicana
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.328	ENSPPYG00000016282	TDP2	88	68.023	Pongo_abelii
MGP_CAROLIEiJ_G0018354	Tdp2	91	67.647	ENSPCOG00000021415	TDP2	98	73.477	Propithecus_coquereli
MGP_CAROLIEiJ_G0018354	Tdp2	99	48.303	ENSPNYG00000011532	tdp2b	94	50.286	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018354	Tdp2	67	53.358	ENSPNYG00000011504	tdp2b	96	50.847	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018354	Tdp2	66	53.659	ENSPNAG00000022162	tdp2a	63	53.659	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018354	Tdp2	100	87.568	ENSRNOG00000018246	Tdp2	100	87.297	Rattus_norvegicus
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.622	ENSRBIG00000037119	TDP2	92	74.820	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.328	ENSRROG00000005025	TDP2	92	74.460	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018354	Tdp2	96	66.667	ENSSBOG00000028734	TDP2	91	74.820	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018354	Tdp2	99	58.133	ENSSHAG00000002506	TDP2	93	60.345	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018354	Tdp2	76	51.190	ENSSFOG00015011322	-	73	51.190	Scleropages_formosus
MGP_CAROLIEiJ_G0018354	Tdp2	74	70.609	ENSSARG00000013547	TDP2	100	70.609	Sorex_araneus
MGP_CAROLIEiJ_G0018354	Tdp2	91	59.143	ENSSPUG00000008288	TDP2	95	59.143	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	ENSSSCG00000001092	TDP2	95	67.733	Sus_scrofa
MGP_CAROLIEiJ_G0018354	Tdp2	68	64.961	ENSTGUG00000009035	TDP2	97	64.961	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018354	Tdp2	75	50.177	ENSTRUG00000012218	-	94	50.177	Takifugu_rubripes
MGP_CAROLIEiJ_G0018354	Tdp2	99	47.493	ENSTRUG00000014347	tdp2b	96	49.288	Takifugu_rubripes
MGP_CAROLIEiJ_G0018354	Tdp2	68	52.344	ENSTNIG00000010260	TDP2	97	52.140	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018354	Tdp2	100	46.512	ENSTNIG00000017792	tdp2b	96	48.333	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018354	Tdp2	96	65.642	ENSTTRG00000016376	TDP2	95	67.733	Tursiops_truncatus
MGP_CAROLIEiJ_G0018354	Tdp2	94	66.097	ENSUAMG00000025939	TDP2	96	66.570	Ursus_americanus
MGP_CAROLIEiJ_G0018354	Tdp2	75	74.643	ENSUMAG00000020111	TDP2	93	74.643	Ursus_maritimus
MGP_CAROLIEiJ_G0018354	Tdp2	91	57.910	ENSXETG00000014826	tdp2	95	57.910	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018354	Tdp2	69	50.958	ENSXCOG00000010778	-	72	50.575	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0018354	Tdp2	69	51.154	ENSXMAG00000022252	-	74	51.550	Xiphophorus_maculatus