EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018429 (Gene tree)
Gene ID: 110308257
Gene Symbol: Rpp40
Alias: D8Bwg1265e|Rnasep1
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 13889 bases
Position: chr13:31284485-31298373
Accession: 110308257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034103	Ribonuc_P_40	PF08584.11	3.1e-92	1	1
MGP_CAROLIEiJ_P0034106	Ribonuc_P_40	PF08584.11	1.2e-76	1	1
MGP_CAROLIEiJ_P0034104	Ribonuc_P_40	PF08584.11	4.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034104	-	274	-	MGP_CAROLIEiJ_P0034104	83 (aa)	-	-
MGP_CAROLIEiJ_T0034105	-	3257	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034106	-	1053	-	MGP_CAROLIEiJ_P0034106	340 (aa)	-	-
MGP_CAROLIEiJ_T0034103	-	4692	-	MGP_CAROLIEiJ_P0034103	363 (aa)	XP_021036349	UPI000A31ABC5

Gene Model

Click here to download MGP_CAROLIEiJ_G0018429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	ENSG00000124787	RPP40	100	83.747	Homo_sapiens
MGP_CAROLIEiJ_G0018429	Rpp40	77	48.438	ENSAPOG00000008660	rpp40	92	30.592	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	ENSAMEG00000012938	RPP40	100	85.950	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018429	Rpp40	98	36.975	ENSACIG00000003617	rpp40	98	36.975	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018429	Rpp40	98	37.255	ENSAOCG00000011846	rpp40	99	37.255	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018429	Rpp40	98	37.255	ENSAPEG00000001322	rpp40	99	37.255	Amphiprion_percula
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.997	ENSATEG00000006584	rpp40	99	39.276	Anabas_testudineus
MGP_CAROLIEiJ_G0018429	Rpp40	77	82.812	ENSAPLG00000005691	RPP40	99	66.887	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018429	Rpp40	99	63.510	ENSACAG00000006550	RPP40	88	63.510	Anolis_carolinensis
MGP_CAROLIEiJ_G0018429	Rpp40	100	80.441	ENSANAG00000029246	RPP40	100	80.441	Aotus_nancymaae
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.873	ENSACLG00000015883	rpp40	96	38.873	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018429	Rpp40	77	71.875	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	ENSBTAG00000003332	RPP40	100	83.196	Bos_taurus
MGP_CAROLIEiJ_G0018429	Rpp40	100	81.543	ENSCJAG00000021373	RPP40	100	81.543	Callithrix_jacchus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.399	ENSCAFG00000009435	RPP40	100	85.399	Canis_familiaris
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.399	ENSCAFG00020013380	RPP40	100	85.399	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.471	ENSCHIG00000016849	RPP40	100	83.471	Capra_hircus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.294	ENSTSYG00000032857	RPP40	100	85.294	Carlito_syrichta
MGP_CAROLIEiJ_G0018429	Rpp40	90	77.064	ENSCAPG00000004957	RPP40	98	77.064	Cavia_aperea
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.412	ENSCPOG00000005855	RPP40	100	84.412	Cavia_porcellus
MGP_CAROLIEiJ_G0018429	Rpp40	100	81.543	ENSCCAG00000019809	RPP40	100	81.543	Cebus_capucinus
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	ENSCATG00000038787	RPP40	100	83.196	Cercocebus_atys
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.647	ENSCLAG00000003235	RPP40	100	82.647	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.471	ENSCSAG00000007307	RPP40	100	83.471	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018429	Rpp40	78	89.231	ENSCHOG00000005856	-	100	66.400	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018429	Rpp40	99	68.611	ENSCPBG00000009003	RPP40	99	68.611	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	ENSCANG00000033965	RPP40	100	83.747	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.848	ENSCGRG00001018328	Rpp40	100	84.848	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.848	ENSCGRG00000011344	Rpp40	100	84.848	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018429	Rpp40	98	34.831	ENSCSEG00000015006	-	98	34.831	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018429	Rpp40	66	50.909	ENSCVAG00000012169	rpp40	100	34.799	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018429	Rpp40	98	50.279	ENSDARG00000017605	rpp40	99	50.279	Danio_rerio
MGP_CAROLIEiJ_G0018429	Rpp40	82	80.135	ENSDNOG00000048136	RPP40	99	80.135	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018429	Rpp40	100	81.543	ENSDORG00000029944	-	100	81.543	Dipodomys_ordii
MGP_CAROLIEiJ_G0018429	Rpp40	100	61.850	ENSDORG00000011196	-	100	61.850	Dipodomys_ordii
MGP_CAROLIEiJ_G0018429	Rpp40	90	79.775	ENSETEG00000007458	RPP40	100	65.840	Echinops_telfairi
MGP_CAROLIEiJ_G0018429	Rpp40	98	46.197	ENSEBUG00000000386	rpp40	99	46.197	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.124	ENSEASG00005012116	RPP40	80	85.124	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.675	ENSECAG00000017247	RPP40	80	85.675	Equus_caballus
MGP_CAROLIEiJ_G0018429	Rpp40	82	65.993	ENSEEUG00000012087	RPP40	100	65.993	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018429	Rpp40	98	48.324	ENSELUG00000017004	rpp40	99	48.324	Esox_lucius
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.706	ENSFCAG00000009249	RPP40	100	84.706	Felis_catus
MGP_CAROLIEiJ_G0018429	Rpp40	77	82.812	ENSFALG00000013166	RPP40	100	63.609	Ficedula_albicollis
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.298	ENSFDAG00000013001	-	100	84.298	Fukomys_damarensis
MGP_CAROLIEiJ_G0018429	Rpp40	80	67.123	ENSFDAG00000000265	-	99	67.123	Fukomys_damarensis
MGP_CAROLIEiJ_G0018429	Rpp40	98	39.216	ENSFHEG00000021429	rpp40	88	39.216	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018429	Rpp40	72	61.667	ENSGMOG00000018653	rpp40	100	38.820	Gadus_morhua
MGP_CAROLIEiJ_G0018429	Rpp40	99	65.000	ENSGALG00000036074	RPP40	99	65.000	Gallus_gallus
MGP_CAROLIEiJ_G0018429	Rpp40	82	35.235	ENSGAFG00000004189	-	98	35.235	Gambusia_affinis
MGP_CAROLIEiJ_G0018429	Rpp40	98	39.776	ENSGACG00000002472	rpp40	99	39.776	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018429	Rpp40	99	69.167	ENSGAGG00000012918	RPP40	99	69.167	Gopherus_agassizii
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	ENSGGOG00000013764	RPP40	100	83.196	Gorilla_gorilla
MGP_CAROLIEiJ_G0018429	Rpp40	77	53.125	ENSHBUG00000009378	rpp40	93	37.615	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.645	ENSHGLG00000004871	RPP40	100	82.645	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.920	ENSHGLG00100002080	RPP40	100	82.920	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018429	Rpp40	96	33.621	ENSHCOG00000013264	-	93	33.621	Hippocampus_comes
MGP_CAROLIEiJ_G0018429	Rpp40	99	47.222	ENSIPUG00000008951	RPP40	99	47.222	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.022	ENSSTOG00000011199	RPP40	100	84.022	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.059	ENSJJAG00000020629	Rpp40	100	82.059	Jaculus_jaculus
MGP_CAROLIEiJ_G0018429	Rpp40	98	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.936	ENSLBEG00000022724	rpp40	99	38.936	Labrus_bergylta
MGP_CAROLIEiJ_G0018429	Rpp40	78	81.538	ENSLACG00000014848	RPP40	99	59.722	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018429	Rpp40	100	53.719	ENSLOCG00000011650	rpp40	100	53.719	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018429	Rpp40	78	90.769	ENSLAFG00000007530	RPP40	100	79.868	Loxodonta_africana
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.235	ENSMFAG00000043100	RPP40	100	83.235	Macaca_fascicularis
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.941	ENSMMUG00000004966	RPP40	100	82.941	Macaca_mulatta
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.529	ENSMNEG00000041986	RPP40	100	83.529	Macaca_nemestrina
MGP_CAROLIEiJ_G0018429	Rpp40	98	74.925	ENSMLEG00000040851	RPP40	100	81.250	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018429	Rpp40	98	40.056	ENSMAMG00000019551	rpp40	98	40.056	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018429	Rpp40	99	39.335	ENSMZEG00005019475	rpp40	99	39.335	Maylandia_zebra
MGP_CAROLIEiJ_G0018429	Rpp40	99	62.500	ENSMGAG00000004009	RPP40	99	62.500	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018429	Rpp40	100	88.154	ENSMAUG00000010268	Rpp40	100	88.154	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.399	ENSMICG00000003297	RPP40	100	85.294	Microcebus_murinus
MGP_CAROLIEiJ_G0018429	Rpp40	100	90.083	ENSMOCG00000000305	Rpp40	100	90.083	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018429	Rpp40	98	34.174	ENSMMOG00000020591	-	99	34.174	Mola_mola
MGP_CAROLIEiJ_G0018429	Rpp40	100	77.473	ENSMODG00000009826	RPP40	100	77.473	Monodelphis_domestica
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.375	ENSMALG00000020133	rpp40	99	38.936	Monopterus_albus
MGP_CAROLIEiJ_G0018429	Rpp40	100	100.000	ENSMUSG00000021418	Rpp40	99	100.000	Mus_musculus
MGP_CAROLIEiJ_G0018429	Rpp40	100	100.000	MGP_PahariEiJ_G0019497	Rpp40	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0018429	Rpp40	100	100.000	MGP_SPRETEiJ_G0019309	Rpp40	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	ENSMPUG00000000530	RPP40	93	85.950	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	ENSMLUG00000000501	RPP40	100	83.747	Myotis_lucifugus
MGP_CAROLIEiJ_G0018429	Rpp40	100	86.777	ENSNGAG00000023955	-	100	86.777	Nannospalax_galili
MGP_CAROLIEiJ_G0018429	Rpp40	95	77.457	ENSNGAG00000022529	-	100	77.457	Nannospalax_galili
MGP_CAROLIEiJ_G0018429	Rpp40	77	53.125	ENSNBRG00000017465	rpp40	86	37.500	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.094	ENSNLEG00000034397	RPP40	100	82.094	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018429	Rpp40	100	71.625	ENSMEUG00000005300	RPP40	100	71.625	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.920	ENSODEG00000007255	-	100	82.920	Octodon_degus
MGP_CAROLIEiJ_G0018429	Rpp40	100	78.788	ENSODEG00000018153	-	100	78.788	Octodon_degus
MGP_CAROLIEiJ_G0018429	Rpp40	88	82.609	ENSODEG00000006170	-	100	82.609	Octodon_degus
MGP_CAROLIEiJ_G0018429	Rpp40	99	38.781	ENSONIG00000014016	rpp40	99	38.781	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018429	Rpp40	83	71.947	ENSOANG00000001200	RPP40	99	71.947	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0018429	Rpp40	99	74.238	ENSOCUG00000000354	RPP40	99	74.238	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018429	Rpp40	99	36.111	ENSORLG00000008242	-	100	36.111	Oryzias_latipes
MGP_CAROLIEiJ_G0018429	Rpp40	99	36.111	ENSORLG00020013745	-	91	36.111	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018429	Rpp40	99	36.389	ENSORLG00015000887	-	100	36.389	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018429	Rpp40	99	37.119	ENSOMEG00000002747	rpp40	100	37.119	Oryzias_melastigma
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.573	ENSOGAG00000006055	RPP40	100	84.573	Otolemur_garnettii
MGP_CAROLIEiJ_G0018429	Rpp40	91	80.781	ENSOARG00000018783	RPP40	100	82.838	Ovis_aries
MGP_CAROLIEiJ_G0018429	Rpp40	100	82.920	ENSPPAG00000023703	RPP40	100	82.920	Pan_paniscus
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.412	ENSPPRG00000005612	RPP40	100	84.412	Panthera_pardus
MGP_CAROLIEiJ_G0018429	Rpp40	100	77.568	ENSPTIG00000018847	RPP40	100	77.568	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	ENSPTRG00000017690	RPP40	100	83.196	Pan_troglodytes
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.471	ENSPANG00000017865	RPP40	100	83.471	Papio_anubis
MGP_CAROLIEiJ_G0018429	Rpp40	98	50.838	ENSPKIG00000006311	rpp40	99	50.838	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018429	Rpp40	77	85.938	ENSPSIG00000007854	RPP40	100	70.270	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018429	Rpp40	92	83.439	ENSPEMG00000020809	Rpp40	91	83.439	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018429	Rpp40	98	43.089	ENSPMAG00000008412	rpp40	99	48.905	Petromyzon_marinus
MGP_CAROLIEiJ_G0018429	Rpp40	100	76.309	ENSPCIG00000010682	RPP40	100	76.309	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018429	Rpp40	98	35.933	ENSPFOG00000011460	rpp40	98	35.933	Poecilia_formosa
MGP_CAROLIEiJ_G0018429	Rpp40	98	36.134	ENSPLAG00000001334	rpp40	99	36.134	Poecilia_latipinna
MGP_CAROLIEiJ_G0018429	Rpp40	98	36.415	ENSPMEG00000007721	rpp40	99	36.415	Poecilia_mexicana
MGP_CAROLIEiJ_G0018429	Rpp40	98	37.255	ENSPREG00000009215	rpp40	99	37.255	Poecilia_reticulata
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.471	ENSPPYG00000016194	RPP40	100	83.471	Pongo_abelii
MGP_CAROLIEiJ_G0018429	Rpp40	51	84.239	ENSPCAG00000002700	-	99	84.239	Procavia_capensis
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	ENSPCOG00000003907	RPP40	100	85.950	Propithecus_coquereli
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.022	ENSPVAG00000011325	RPP40	100	84.022	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018429	Rpp40	77	53.125	ENSPNYG00000004432	rpp40	98	38.255	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018429	Rpp40	98	46.369	ENSPNAG00000019125	rpp40	99	46.369	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018429	Rpp40	100	93.113	ENSRNOG00000016226	Rpp40	100	93.113	Rattus_norvegicus
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	ENSRBIG00000035800	RPP40	100	83.747	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018429	Rpp40	100	83.747	ENSRROG00000039116	RPP40	100	83.747	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018429	Rpp40	100	81.267	ENSSBOG00000020297	RPP40	100	81.267	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018429	Rpp40	100	53.906	ENSSHAG00000002102	RPP40	100	75.180	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018429	Rpp40	99	49.587	ENSSFOG00015001142	rpp40	81	49.587	Scleropages_formosus
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.655	ENSSDUG00000007202	rpp40	99	38.655	Seriola_dumerili
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.936	ENSSLDG00000017563	rpp40	99	38.936	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018429	Rpp40	99	68.056	ENSSPUG00000017487	-	99	68.056	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018429	Rpp40	77	79.688	ENSSPUG00000018950	-	100	66.780	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018429	Rpp40	98	38.375	ENSSPAG00000022716	rpp40	99	38.375	Stegastes_partitus
MGP_CAROLIEiJ_G0018429	Rpp40	100	80.441	ENSSSCG00000000998	RPP40	100	80.441	Sus_scrofa
MGP_CAROLIEiJ_G0018429	Rpp40	77	82.812	ENSTGUG00000015246	-	100	68.927	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018429	Rpp40	99	65.642	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018429	Rpp40	98	40.336	ENSTRUG00000003755	rpp40	99	40.336	Takifugu_rubripes
MGP_CAROLIEiJ_G0018429	Rpp40	99	38.611	ENSTNIG00000003077	rpp40	99	38.611	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018429	Rpp40	100	57.031	ENSTBEG00000014467	-	73	58.400	Tupaia_belangeri
MGP_CAROLIEiJ_G0018429	Rpp40	99	77.072	ENSTTRG00000007319	RPP40	100	77.072	Tursiops_truncatus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	ENSUAMG00000002159	RPP40	100	85.950	Ursus_americanus
MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	ENSUMAG00000018639	RPP40	94	85.950	Ursus_maritimus
MGP_CAROLIEiJ_G0018429	Rpp40	81	61.905	ENSVPAG00000004652	-	99	61.905	Vicugna_pacos
MGP_CAROLIEiJ_G0018429	Rpp40	100	84.573	ENSVVUG00000005451	RPP40	100	84.573	Vulpes_vulpes
MGP_CAROLIEiJ_G0018429	Rpp40	99	54.247	ENSXETG00000017617	rpp40	100	54.247	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018429	Rpp40	77	39.062	ENSXCOG00000019991	-	86	32.174	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0018429	Rpp40	99	33.618	ENSXMAG00000024940	rpp40	99	33.618	Xiphophorus_maculatus