EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018483 (Gene tree)
Gene ID: 110307891
Gene Symbol: Nup153
Alias: B130015D15Rik
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 52225 bases
Position: chr13:41916501-41968725
Accession: 110307891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034237	zf-RanBP	PF00641.18	2e-40	1	4
MGP_CAROLIEiJ_P0034237	zf-RanBP	PF00641.18	2e-40	2	4
MGP_CAROLIEiJ_P0034237	zf-RanBP	PF00641.18	2e-40	3	4
MGP_CAROLIEiJ_P0034237	zf-RanBP	PF00641.18	2e-40	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034237	-	6126	XM_021180144	MGP_CAROLIEiJ_P0034237	1465 (aa)	XP_021035803	UPI000A317488
MGP_CAROLIEiJ_T0034241	-	767	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034240	-	703	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034238	-	607	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034239	-	551	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018483	Nup153	99	81.203	ENSG00000124789	NUP153	99	80.930	Homo_sapiens
MGP_CAROLIEiJ_G0018483	Nup153	59	46.997	ENSAPOG00000019495	nup153	99	40.246	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018483	Nup153	99	79.700	ENSAMEG00000000721	NUP153	99	79.428	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018483	Nup153	99	38.797	ENSAOCG00000007098	nup153	99	40.063	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018483	Nup153	99	39.231	ENSAPEG00000012075	nup153	99	40.563	Amphiprion_percula
MGP_CAROLIEiJ_G0018483	Nup153	59	46.825	ENSATEG00000014134	nup153	99	40.062	Anabas_testudineus
MGP_CAROLIEiJ_G0018483	Nup153	97	53.459	ENSACAG00000004118	NUP153	100	53.898	Anolis_carolinensis
MGP_CAROLIEiJ_G0018483	Nup153	99	81.750	ENSANAG00000001808	NUP153	99	81.476	Aotus_nancymaae
MGP_CAROLIEiJ_G0018483	Nup153	77	42.869	ENSACLG00000016592	nup153	98	40.547	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018483	Nup153	99	37.821	ENSAMXG00000021025	nup153	99	40.987	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.573	ENSBTAG00000017128	NUP153	99	80.368	Bos_taurus
MGP_CAROLIEiJ_G0018483	Nup153	99	82.377	ENSCJAG00000006685	NUP153	99	81.694	Callithrix_jacchus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.164	ENSCAFG00000010146	NUP153	100	81.041	Canis_familiaris
MGP_CAROLIEiJ_G0018483	Nup153	99	80.845	ENSCAFG00020010901	NUP153	99	81.186	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018483	Nup153	99	81.241	ENSCHIG00000023764	NUP153	99	80.764	Capra_hircus
MGP_CAROLIEiJ_G0018483	Nup153	97	81.402	ENSTSYG00000001251	NUP153	98	80.916	Carlito_syrichta
MGP_CAROLIEiJ_G0018483	Nup153	99	79.030	ENSCPOG00000004007	NUP153	99	78.552	Cavia_porcellus
MGP_CAROLIEiJ_G0018483	Nup153	99	79.221	ENSCCAG00000024038	NUP153	100	79.621	Cebus_capucinus
MGP_CAROLIEiJ_G0018483	Nup153	99	81.750	ENSCATG00000041429	NUP153	99	81.271	Cercocebus_atys
MGP_CAROLIEiJ_G0018483	Nup153	99	79.904	ENSCLAG00000001915	NUP153	99	79.768	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018483	Nup153	99	81.601	ENSCSAG00000007624	NUP153	99	81.190	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018483	Nup153	62	52.381	ENSCHOG00000009608	-	99	51.732	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018483	Nup153	86	56.583	ENSCHOG00000003510	-	99	56.191	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018483	Nup153	79	55.915	ENSCHOG00000007137	-	99	55.574	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018483	Nup153	58	62.158	ENSCHOG00000013388	-	99	61.295	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018483	Nup153	86	55.991	ENSCHOG00000008316	-	99	55.834	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018483	Nup153	99	63.360	ENSCPBG00000008333	NUP153	99	62.753	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018483	Nup153	99	78.127	ENSCANG00000033390	NUP153	99	77.785	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018483	Nup153	99	90.165	ENSCGRG00001021016	Nup153	99	90.234	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018483	Nup153	97	90.007	ENSCGRG00000009244	Nup153	100	90.077	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018483	Nup153	99	40.025	ENSCSEG00000017912	nup153	98	41.024	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018483	Nup153	90	39.019	ENSCVAG00000020646	nup153	98	39.116	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018483	Nup153	99	41.377	ENSDARG00000099972	nup153	99	41.226	Danio_rerio
MGP_CAROLIEiJ_G0018483	Nup153	99	79.918	ENSDNOG00000001153	NUP153	99	80.396	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018483	Nup153	99	81.024	ENSDORG00000001736	Nup153	99	81.160	Dipodomys_ordii
MGP_CAROLIEiJ_G0018483	Nup153	79	87.059	ENSETEG00000010324	-	76	87.059	Echinops_telfairi
MGP_CAROLIEiJ_G0018483	Nup153	99	81.352	ENSEASG00005009945	NUP153	99	81.284	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018483	Nup153	99	81.284	ENSECAG00000016010	NUP153	99	81.216	Equus_caballus
MGP_CAROLIEiJ_G0018483	Nup153	73	87.119	ENSEEUG00000010183	NUP153	75	85.763	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018483	Nup153	99	40.607	ENSELUG00000019108	nup153	99	40.509	Esox_lucius
MGP_CAROLIEiJ_G0018483	Nup153	99	80.735	ENSFCAG00000011583	NUP153	99	79.986	Felis_catus
MGP_CAROLIEiJ_G0018483	Nup153	94	57.687	ENSFALG00000013388	NUP153	99	57.717	Ficedula_albicollis
MGP_CAROLIEiJ_G0018483	Nup153	92	50.355	ENSFHEG00000013401	nup153	99	50.718	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018483	Nup153	83	43.222	ENSGMOG00000010422	nup153	89	43.558	Gadus_morhua
MGP_CAROLIEiJ_G0018483	Nup153	99	61.747	ENSGALG00000012720	NUP153	99	61.476	Gallus_gallus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.042	ENSGAFG00000010927	nup153	99	38.638	Gambusia_affinis
MGP_CAROLIEiJ_G0018483	Nup153	99	40.077	ENSGACG00000005389	nup153	99	40.629	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018483	Nup153	99	62.913	ENSGAGG00000022386	NUP153	99	62.576	Gopherus_agassizii
MGP_CAROLIEiJ_G0018483	Nup153	99	80.451	ENSGGOG00000014261	NUP153	99	80.041	Gorilla_gorilla
MGP_CAROLIEiJ_G0018483	Nup153	77	42.675	ENSHBUG00000002944	nup153	98	41.180	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018483	Nup153	99	79.808	ENSHGLG00000007924	NUP153	99	79.535	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018483	Nup153	99	79.808	ENSHGLG00100001529	NUP153	99	79.535	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018483	Nup153	99	38.882	ENSHCOG00000019361	nup153	99	39.206	Hippocampus_comes
MGP_CAROLIEiJ_G0018483	Nup153	99	41.908	ENSIPUG00000014605	nup153	99	41.586	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018483	Nup153	97	81.198	ENSSTOG00000005807	NUP153	100	80.362	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.632	ENSJJAG00000016760	Nup153	99	80.838	Jaculus_jaculus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.306	ENSKMAG00000006344	nup153	99	39.975	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018483	Nup153	59	48.216	ENSLBEG00000002982	nup153	98	40.428	Labrus_bergylta
MGP_CAROLIEiJ_G0018483	Nup153	97	44.802	ENSLACG00000006480	NUP153	100	44.960	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018483	Nup153	99	45.812	ENSLOCG00000008267	nup153	99	45.055	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.027	ENSLAFG00000015905	NUP153	99	79.414	Loxodonta_africana
MGP_CAROLIEiJ_G0018483	Nup153	99	81.887	ENSMFAG00000045732	NUP153	99	81.408	Macaca_fascicularis
MGP_CAROLIEiJ_G0018483	Nup153	99	81.818	ENSMMUG00000001993	NUP153	99	81.340	Macaca_mulatta
MGP_CAROLIEiJ_G0018483	Nup153	99	81.887	ENSMNEG00000038011	NUP153	99	81.408	Macaca_nemestrina
MGP_CAROLIEiJ_G0018483	Nup153	99	82.023	ENSMLEG00000030776	NUP153	99	81.340	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.861	ENSMAMG00000013184	nup153	98	41.006	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018483	Nup153	77	41.862	ENSMZEG00005004371	nup153	99	39.106	Maylandia_zebra
MGP_CAROLIEiJ_G0018483	Nup153	97	60.096	ENSMGAG00000003139	NUP153	100	60.660	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018483	Nup153	95	88.906	ENSMAUG00000007737	Nup153	99	89.142	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018483	Nup153	99	82.353	ENSMICG00000006089	NUP153	99	82.079	Microcebus_murinus
MGP_CAROLIEiJ_G0018483	Nup153	99	88.843	ENSMOCG00000007623	Nup153	99	88.636	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018483	Nup153	99	38.243	ENSMMOG00000019049	nup153	99	38.452	Mola_mola
MGP_CAROLIEiJ_G0018483	Nup153	97	69.622	ENSMODG00000010951	NUP153	99	68.961	Monodelphis_domestica
MGP_CAROLIEiJ_G0018483	Nup153	62	46.387	ENSMALG00000013995	nup153	99	41.021	Monopterus_albus
MGP_CAROLIEiJ_G0018483	Nup153	100	97.747	ENSMUSG00000021374	Nup153	100	97.747	Mus_musculus
MGP_CAROLIEiJ_G0018483	Nup153	100	97.474	MGP_PahariEiJ_G0019551	Nup153	100	97.474	Mus_pahari
MGP_CAROLIEiJ_G0018483	Nup153	100	98.020	MGP_SPRETEiJ_G0019363	Nup153	100	98.020	Mus_spretus
MGP_CAROLIEiJ_G0018483	Nup153	99	78.215	ENSMLUG00000004775	NUP153	99	78.081	Myotis_lucifugus
MGP_CAROLIEiJ_G0018483	Nup153	99	83.767	ENSNGAG00000013817	Nup153	99	83.767	Nannospalax_galili
MGP_CAROLIEiJ_G0018483	Nup153	77	40.861	ENSNBRG00000012456	nup153	99	39.083	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018483	Nup153	99	81.967	ENSNLEG00000001141	NUP153	99	81.557	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018483	Nup153	83	88.889	ENSMEUG00000012874	NUP153	79	88.889	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018483	Nup153	90	74.459	ENSOPRG00000006221	NUP153	86	74.821	Ochotona_princeps
MGP_CAROLIEiJ_G0018483	Nup153	99	75.803	ENSODEG00000005620	NUP153	99	75.735	Octodon_degus
MGP_CAROLIEiJ_G0018483	Nup153	99	41.789	ENSONIG00000002524	nup153	99	41.948	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018483	Nup153	97	62.918	ENSOANG00000011858	NUP153	99	63.358	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0018483	Nup153	99	77.353	ENSOCUG00000003064	NUP153	99	77.012	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.245	ENSORLG00000012674	nup153	99	40.478	Oryzias_latipes
MGP_CAROLIEiJ_G0018483	Nup153	99	39.369	ENSORLG00020006026	nup153	98	39.814	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018483	Nup153	99	39.256	ENSORLG00015013823	nup153	98	40.151	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018483	Nup153	59	47.129	ENSOMEG00000012062	nup153	99	40.276	Oryzias_melastigma
MGP_CAROLIEiJ_G0018483	Nup153	99	79.907	ENSOGAG00000014899	NUP153	99	79.907	Otolemur_garnettii
MGP_CAROLIEiJ_G0018483	Nup153	98	79.170	ENSOARG00000011514	NUP153	100	78.965	Ovis_aries
MGP_CAROLIEiJ_G0018483	Nup153	99	81.066	ENSPPAG00000029729	NUP153	99	81.066	Pan_paniscus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.327	ENSPPRG00000006160	NUP153	99	80.054	Panthera_pardus
MGP_CAROLIEiJ_G0018483	Nup153	99	79.850	ENSPTIG00000017212	NUP153	99	79.578	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018483	Nup153	99	81.203	ENSPTRG00000017752	NUP153	99	81.203	Pan_troglodytes
MGP_CAROLIEiJ_G0018483	Nup153	99	82.023	ENSPANG00000015139	NUP153	99	81.545	Papio_anubis
MGP_CAROLIEiJ_G0018483	Nup153	99	40.823	ENSPKIG00000001734	nup153	73	44.352	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018483	Nup153	97	62.930	ENSPSIG00000017226	NUP153	100	62.380	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018483	Nup153	99	38.967	ENSPMGG00000001716	nup153	99	39.487	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0018483	Nup153	99	90.447	ENSPEMG00000020772	Nup153	99	90.722	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018483	Nup153	57	35.878	ENSPMAG00000002487	-	100	35.457	Petromyzon_marinus
MGP_CAROLIEiJ_G0018483	Nup153	99	69.112	ENSPCIG00000029680	NUP153	99	69.433	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.807	ENSPFOG00000013146	nup153	99	40.296	Poecilia_formosa
MGP_CAROLIEiJ_G0018483	Nup153	99	39.812	ENSPMEG00000021677	nup153	98	39.424	Poecilia_mexicana
MGP_CAROLIEiJ_G0018483	Nup153	99	39.665	ENSPREG00000007463	nup153	98	39.176	Poecilia_reticulata
MGP_CAROLIEiJ_G0018483	Nup153	99	79.494	ENSPPYG00000016259	NUP153	99	78.249	Pongo_abelii
MGP_CAROLIEiJ_G0018483	Nup153	75	95.833	ENSPCAG00000010444	NUP153	79	88.889	Procavia_capensis
MGP_CAROLIEiJ_G0018483	Nup153	99	79.891	ENSPCOG00000014488	NUP153	99	79.549	Propithecus_coquereli
MGP_CAROLIEiJ_G0018483	Nup153	93	78.416	ENSPVAG00000012632	NUP153	99	78.052	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018483	Nup153	99	40.512	ENSPNYG00000011225	nup153	99	40.768	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018483	Nup153	99	40.797	ENSPNAG00000024377	nup153	99	41.286	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018483	Nup153	99	93.531	ENSRNOG00000001456	Nup153	99	93.393	Rattus_norvegicus
MGP_CAROLIEiJ_G0018483	Nup153	99	80.835	ENSRBIG00000041878	NUP153	99	80.424	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018483	Nup153	98	81.094	ENSRROG00000029849	NUP153	99	81.045	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018483	Nup153	99	82.514	ENSSBOG00000024532	NUP153	99	82.104	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018483	Nup153	61	65.498	ENSSHAG00000016087	-	97	65.677	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018483	Nup153	99	40.713	ENSSFOG00015011040	nup153	99	41.294	Scleropages_formosus
MGP_CAROLIEiJ_G0018483	Nup153	99	38.899	ENSSMAG00000008418	nup153	98	39.963	Scophthalmus_maximus
MGP_CAROLIEiJ_G0018483	Nup153	59	47.939	ENSSDUG00000010779	nup153	99	40.381	Seriola_dumerili
MGP_CAROLIEiJ_G0018483	Nup153	59	47.392	ENSSLDG00000012692	nup153	78	42.419	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018483	Nup153	97	72.241	ENSSARG00000013269	NUP153	100	72.380	Sorex_araneus
MGP_CAROLIEiJ_G0018483	Nup153	99	61.134	ENSSPUG00000016687	NUP153	98	60.459	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018483	Nup153	63	46.390	ENSSPAG00000014945	nup153	98	40.348	Stegastes_partitus
MGP_CAROLIEiJ_G0018483	Nup153	99	81.135	ENSSSCG00000026034	NUP153	99	81.135	Sus_scrofa
MGP_CAROLIEiJ_G0018483	Nup153	97	58.465	ENSTGUG00000005917	NUP153	100	58.328	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018483	Nup153	99	38.736	ENSTRUG00000010163	nup153	99	38.303	Takifugu_rubripes
MGP_CAROLIEiJ_G0018483	Nup153	99	38.691	ENSTNIG00000009182	nup153	99	39.379	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018483	Nup153	67	80.737	ENSTBEG00000004161	NUP153	68	79.603	Tupaia_belangeri
MGP_CAROLIEiJ_G0018483	Nup153	94	78.479	ENSTTRG00000007060	NUP153	88	80.231	Tursiops_truncatus
MGP_CAROLIEiJ_G0018483	Nup153	61	75.938	ENSUAMG00000015215	NUP153	98	75.828	Ursus_americanus
MGP_CAROLIEiJ_G0018483	Nup153	97	77.056	ENSUMAG00000017135	NUP153	99	76.556	Ursus_maritimus
MGP_CAROLIEiJ_G0018483	Nup153	99	82.092	ENSVPAG00000002072	NUP153	99	81.408	Vicugna_pacos
MGP_CAROLIEiJ_G0018483	Nup153	99	81.118	ENSVVUG00000003265	NUP153	100	80.743	Vulpes_vulpes
MGP_CAROLIEiJ_G0018483	Nup153	99	46.282	ENSXETG00000014197	nup153	99	45.828	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018483	Nup153	99	39.581	ENSXCOG00000020098	nup153	99	38.759	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0018483	Nup153	99	39.937	ENSXMAG00000003437	nup153	98	39.043	Xiphophorus_maculatus