EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018518 (Gene tree)
Gene ID: 110308289
Gene Symbol: Secisbp2
Alias: 2210413N07Rik|2810012K13Rik|SBP2
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 32954 bases
Position: chr13:46868588-46901541
Accession: 110308289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034339	Ribosomal_L7Ae	PF01248.26	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034339	-	3331	XM_021180740	MGP_CAROLIEiJ_P0034339	857 (aa)	XP_021036399	UPI000A318661
MGP_CAROLIEiJ_T0034342	-	556	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034343	-	775	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034340	-	1918	-	MGP_CAROLIEiJ_P0034340	413 (aa)	-	-
MGP_CAROLIEiJ_T0034341	-	604	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034344	-	789	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.312	ENSG00000187742	SECISBP2	100	71.312	Homo_sapiens
MGP_CAROLIEiJ_G0018518	Secisbp2	98	65.805	ENSAMEG00000003349	SECISBP2	98	65.805	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018518	Secisbp2	51	49.370	ENSAOCG00000019052	secisbp2	61	48.571	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018518	Secisbp2	51	48.847	ENSAPEG00000012971	secisbp2	61	48.065	Amphiprion_percula
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.495	ENSATEG00000001095	secisbp2	62	47.695	Anabas_testudineus
MGP_CAROLIEiJ_G0018518	Secisbp2	98	41.282	ENSAPLG00000013053	SECISBP2	99	41.282	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018518	Secisbp2	93	42.582	ENSACAG00000016594	SECISBP2	96	42.386	Anolis_carolinensis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	70.814	ENSANAG00000028208	SECISBP2	100	70.814	Aotus_nancymaae
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.686	ENSACLG00000019976	secisbp2	62	47.896	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.921	ENSAMXG00000015953	secisbp2	63	48.310	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	66.204	ENSBTAG00000001939	SECISBP2	100	74.096	Bos_taurus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.047	ENSCJAG00000007806	SECISBP2	100	71.047	Callithrix_jacchus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	67.824	ENSCAFG00000002188	SECISBP2	100	68.403	Canis_familiaris
MGP_CAROLIEiJ_G0018518	Secisbp2	98	67.962	ENSCAFG00020007224	SECISBP2	98	68.551	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.972	ENSCHIG00000010657	SECISBP2	99	65.972	Capra_hircus
MGP_CAROLIEiJ_G0018518	Secisbp2	88	64.508	ENSTSYG00000014119	SECISBP2	97	66.404	Carlito_syrichta
MGP_CAROLIEiJ_G0018518	Secisbp2	84	76.330	ENSCAPG00000008522	SECISBP2	99	76.330	Cavia_aperea
MGP_CAROLIEiJ_G0018518	Secisbp2	100	68.256	ENSCPOG00000014270	SECISBP2	100	68.873	Cavia_porcellus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.279	ENSCCAG00000013350	SECISBP2	100	71.279	Cebus_capucinus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.346	ENSCATG00000008304	SECISBP2	100	71.346	Cercocebus_atys
MGP_CAROLIEiJ_G0018518	Secisbp2	100	69.919	ENSCLAG00000001166	SECISBP2	96	70.267	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.080	ENSCSAG00000007310	SECISBP2	100	71.080	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018518	Secisbp2	85	75.758	ENSCHOG00000011084	SECISBP2	83	75.758	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018518	Secisbp2	53	53.359	ENSCPBG00000005608	SECISBP2	99	53.565	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.621	ENSCANG00000034551	SECISBP2	100	69.697	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	82.847	ENSCGRG00001013930	Secisbp2	100	82.847	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018518	Secisbp2	100	82.964	ENSCGRG00000002600	Secisbp2	100	82.964	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018518	Secisbp2	53	49.789	ENSCVAG00000015876	secisbp2	59	50.759	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018518	Secisbp2	54	49.795	ENSDARG00000073892	secisbp2	85	50.103	Danio_rerio
MGP_CAROLIEiJ_G0018518	Secisbp2	100	67.787	ENSDNOG00000009432	SECISBP2	100	68.366	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.711	ENSDORG00000023182	Secisbp2	100	71.711	Dipodomys_ordii
MGP_CAROLIEiJ_G0018518	Secisbp2	93	69.697	ENSETEG00000001262	SECISBP2	92	69.697	Echinops_telfairi
MGP_CAROLIEiJ_G0018518	Secisbp2	100	67.986	ENSEASG00005013960	SECISBP2	100	67.870	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	68.102	ENSECAG00000015868	SECISBP2	100	67.986	Equus_caballus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	60.116	ENSEEUG00000004400	SECISBP2	100	60.465	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.076	ENSFCAG00000004214	SECISBP2	100	65.698	Felis_catus
MGP_CAROLIEiJ_G0018518	Secisbp2	98	41.353	ENSFALG00000012441	SECISBP2	93	41.491	Ficedula_albicollis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	69.464	ENSFDAG00000021183	SECISBP2	96	69.814	Fukomys_damarensis
MGP_CAROLIEiJ_G0018518	Secisbp2	53	46.094	ENSFHEG00000004095	secisbp2	64	46.471	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018518	Secisbp2	52	45.868	ENSGAFG00000016947	secisbp2	61	46.074	Gambusia_affinis
MGP_CAROLIEiJ_G0018518	Secisbp2	52	51.082	ENSGACG00000013757	secisbp2	75	51.082	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.628	ENSGGOG00000000453	SECISBP2	100	71.628	Gorilla_gorilla
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.445	ENSHGLG00000014380	SECISBP2	96	71.795	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.329	ENSHGLG00100006953	SECISBP2	96	71.678	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018518	Secisbp2	53	48.566	ENSIPUG00000015393	secisbp2	61	48.466	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	72.992	ENSSTOG00000000921	SECISBP2	100	72.992	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.181	ENSJJAG00000020492	Secisbp2	100	71.181	Jaculus_jaculus
MGP_CAROLIEiJ_G0018518	Secisbp2	52	48.861	ENSKMAG00000007129	secisbp2	62	49.788	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	49.398	ENSLBEG00000026023	secisbp2	86	40.537	Labrus_bergylta
MGP_CAROLIEiJ_G0018518	Secisbp2	51	53.236	ENSLACG00000005735	SECISBP2	87	53.236	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018518	Secisbp2	53	50.313	ENSLOCG00000011742	secisbp2	80	50.522	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.087	ENSLAFG00000012998	SECISBP2	100	65.549	Loxodonta_africana
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.429	ENSMFAG00000003045	SECISBP2	100	71.429	Macaca_fascicularis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.429	ENSMMUG00000012532	SECISBP2	100	71.429	Macaca_mulatta
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.429	ENSMNEG00000031737	SECISBP2	100	71.429	Macaca_nemestrina
MGP_CAROLIEiJ_G0018518	Secisbp2	100	66.086	ENSMLEG00000028868	SECISBP2	100	70.328	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.211	ENSMAMG00000006644	secisbp2	62	47.695	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.686	ENSMZEG00005013614	secisbp2	62	47.896	Maylandia_zebra
MGP_CAROLIEiJ_G0018518	Secisbp2	100	81.119	ENSMAUG00000008659	Secisbp2	100	81.119	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.744	ENSMICG00000001176	SECISBP2	100	72.093	Microcebus_murinus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	85.064	ENSMOCG00000000616	Secisbp2	100	85.064	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018518	Secisbp2	100	53.208	ENSMODG00000013365	SECISBP2	100	53.091	Monodelphis_domestica
MGP_CAROLIEiJ_G0018518	Secisbp2	53	48.374	ENSMALG00000004907	secisbp2	63	48.163	Monopterus_albus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	96.853	ENSMUSG00000035139	Secisbp2	100	96.853	Mus_musculus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	93.582	MGP_PahariEiJ_G0019584	Secisbp2	100	93.582	Mus_pahari
MGP_CAROLIEiJ_G0018518	Secisbp2	100	96.292	MGP_SPRETEiJ_G0019399	Secisbp2	100	96.292	Mus_spretus
MGP_CAROLIEiJ_G0018518	Secisbp2	65	69.713	ENSMPUG00000008495	-	100	69.355	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018518	Secisbp2	99	65.457	ENSMLUG00000012348	SECISBP2	99	65.574	Myotis_lucifugus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	77.273	ENSNGAG00000002364	Secisbp2	100	77.273	Nannospalax_galili
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.485	ENSNBRG00000022804	secisbp2	62	47.695	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018518	Secisbp2	100	66.512	ENSNLEG00000008739	SECISBP2	100	70.796	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018518	Secisbp2	96	58.745	ENSOPRG00000007588	SECISBP2	99	58.745	Ochotona_princeps
MGP_CAROLIEiJ_G0018518	Secisbp2	100	70.595	ENSODEG00000000675	SECISBP2	100	70.595	Octodon_degus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	50.658	ENSONIG00000016931	secisbp2	99	52.273	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	70.465	ENSOCUG00000012932	SECISBP2	100	70.964	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018518	Secisbp2	50	50.435	ENSORLG00000000343	secisbp2	69	50.545	Oryzias_latipes
MGP_CAROLIEiJ_G0018518	Secisbp2	50	50.000	ENSORLG00020012878	secisbp2	67	50.109	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018518	Secisbp2	50	50.652	ENSORLG00015004559	secisbp2	61	50.763	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018518	Secisbp2	52	48.394	ENSOMEG00000008595	secisbp2	63	50.000	Oryzias_melastigma
MGP_CAROLIEiJ_G0018518	Secisbp2	100	69.302	ENSOGAG00000000317	SECISBP2	97	69.535	Otolemur_garnettii
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.823	ENSOARG00000007741	SECISBP2	100	65.823	Ovis_aries
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.512	ENSPPAG00000012385	SECISBP2	100	71.512	Pan_paniscus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.076	ENSPPRG00000023911	SECISBP2	100	65.698	Panthera_pardus
MGP_CAROLIEiJ_G0018518	Secisbp2	98	59.434	ENSPTIG00000009781	SECISBP2	99	59.360	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.395	ENSPTRG00000021094	SECISBP2	100	71.395	Pan_troglodytes
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.196	ENSPANG00000024873	SECISBP2	100	71.196	Papio_anubis
MGP_CAROLIEiJ_G0018518	Secisbp2	50	51.802	ENSPKIG00000006499	SECISBP2	51	51.910	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018518	Secisbp2	88	43.788	ENSPSIG00000016257	SECISBP2	96	43.788	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	86.231	ENSPEMG00000020212	Secisbp2	100	86.231	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018518	Secisbp2	100	53.863	ENSPCIG00000010304	SECISBP2	100	53.642	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018518	Secisbp2	52	48.590	ENSPFOG00000008146	secisbp2	74	48.807	Poecilia_formosa
MGP_CAROLIEiJ_G0018518	Secisbp2	52	45.549	ENSPMEG00000013702	secisbp2	62	45.756	Poecilia_mexicana
MGP_CAROLIEiJ_G0018518	Secisbp2	52	46.377	ENSPREG00000008117	secisbp2	62	46.584	Poecilia_reticulata
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.163	ENSPPYG00000019359	SECISBP2	100	71.163	Pongo_abelii
MGP_CAROLIEiJ_G0018518	Secisbp2	78	58.126	ENSPCAG00000000559	-	80	58.580	Procavia_capensis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.512	ENSPCOG00000013354	SECISBP2	100	71.860	Propithecus_coquereli
MGP_CAROLIEiJ_G0018518	Secisbp2	93	66.292	ENSPVAG00000011013	SECISBP2	90	66.292	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.686	ENSPNYG00000016799	secisbp2	62	47.896	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018518	Secisbp2	51	47.433	ENSPNAG00000029922	secisbp2	65	47.475	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018518	Secisbp2	100	91.715	ENSRNOG00000013773	Secisbp2	100	91.715	Rattus_norvegicus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.495	ENSRBIG00000044115	SECISBP2	100	71.495	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018518	Secisbp2	100	71.495	ENSRROG00000030742	SECISBP2	100	71.495	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018518	Secisbp2	80	78.586	ENSSBOG00000015392	SECISBP2	91	78.586	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018518	Secisbp2	100	56.150	ENSSHAG00000005947	SECISBP2	100	56.150	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.573	ENSSFOG00015010409	secisbp2	60	47.318	Scleropages_formosus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.379	ENSSMAG00000008472	secisbp2	76	48.356	Scophthalmus_maximus
MGP_CAROLIEiJ_G0018518	Secisbp2	53	48.000	ENSSDUG00000002089	secisbp2	62	48.542	Seriola_dumerili
MGP_CAROLIEiJ_G0018518	Secisbp2	53	48.400	ENSSLDG00000003510	secisbp2	62	48.800	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018518	Secisbp2	78	97.260	ENSSARG00000012518	-	82	52.950	Sorex_araneus
MGP_CAROLIEiJ_G0018518	Secisbp2	86	42.539	ENSSPUG00000009635	SECISBP2	98	41.176	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018518	Secisbp2	51	49.689	ENSSPAG00000013606	secisbp2	59	49.689	Stegastes_partitus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	67.204	ENSSSCG00000028033	SECISBP2	100	67.319	Sus_scrofa
MGP_CAROLIEiJ_G0018518	Secisbp2	54	57.741	ENSTGUG00000000440	SECISBP2	87	57.741	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018518	Secisbp2	53	46.247	ENSTRUG00000016835	secisbp2	67	45.859	Takifugu_rubripes
MGP_CAROLIEiJ_G0018518	Secisbp2	54	50.420	ENSTNIG00000015576	secisbp2	95	51.410	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018518	Secisbp2	76	84.783	ENSTBEG00000000288	SECISBP2	77	84.783	Tupaia_belangeri
MGP_CAROLIEiJ_G0018518	Secisbp2	100	65.970	ENSTTRG00000003339	SECISBP2	98	66.434	Tursiops_truncatus
MGP_CAROLIEiJ_G0018518	Secisbp2	100	66.086	ENSUAMG00000016243	SECISBP2	100	66.318	Ursus_americanus
MGP_CAROLIEiJ_G0018518	Secisbp2	98	65.012	ENSUMAG00000016261	SECISBP2	99	65.525	Ursus_maritimus
MGP_CAROLIEiJ_G0018518	Secisbp2	88	75.676	ENSVVUG00000022278	SECISBP2	99	65.724	Vulpes_vulpes
MGP_CAROLIEiJ_G0018518	Secisbp2	54	52.459	ENSXETG00000029955	SECISBP2	86	52.459	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018518	Secisbp2	52	45.833	ENSXMAG00000003090	secisbp2	61	46.042	Xiphophorus_maculatus