EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018538 (Gene tree)
Gene ID: 110307824
Gene Symbol: Nop16
Alias: D13Wsu177e
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 6016 bases
Position: chr13:50004051-50010066
Accession: 110307824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034412	Nop16	PF09420.10	2.2e-23	1	2
MGP_CAROLIEiJ_P0034412	Nop16	PF09420.10	2.2e-23	2	2
MGP_CAROLIEiJ_P0034413	Nop16	PF09420.10	2.4e-23	1	2
MGP_CAROLIEiJ_P0034413	Nop16	PF09420.10	2.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034412	-	1786	XM_021180056	MGP_CAROLIEiJ_P0034412	178 (aa)	XP_021035715	UPI000A315843
MGP_CAROLIEiJ_T0034413	-	794	-	MGP_CAROLIEiJ_P0034413	181 (aa)	-	-
MGP_CAROLIEiJ_T0034414	-	677	-	MGP_CAROLIEiJ_P0034414	36 (aa)	-	UPI0001889CE8

Gene Model

Click here to download MGP_CAROLIEiJ_G0018538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018538	Nop16	98	50.286	ENSAPOG00000010682	-	99	50.286	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018538	Nop16	100	92.697	ENSAMEG00000006988	-	100	92.697	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018538	Nop16	97	52.907	ENSACIG00000019263	nop16	97	53.488	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018538	Nop16	98	50.857	ENSAOCG00000005504	nop16	99	50.857	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018538	Nop16	98	50.857	ENSAPEG00000006605	nop16	99	50.857	Amphiprion_percula
MGP_CAROLIEiJ_G0018538	Nop16	96	54.706	ENSATEG00000014089	nop16	95	54.706	Anabas_testudineus
MGP_CAROLIEiJ_G0018538	Nop16	99	70.455	ENSACAG00000006333	-	99	70.455	Anolis_carolinensis
MGP_CAROLIEiJ_G0018538	Nop16	100	87.079	ENSANAG00000015743	-	100	87.079	Aotus_nancymaae
MGP_CAROLIEiJ_G0018538	Nop16	100	80.899	ENSANAG00000027410	-	100	80.899	Aotus_nancymaae
MGP_CAROLIEiJ_G0018538	Nop16	96	54.706	ENSACLG00000025227	nop16	95	54.706	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018538	Nop16	94	46.108	ENSAMXG00000006843	nop16	96	45.562	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	ENSBTAG00000010734	NOP16	100	91.573	Bos_taurus
MGP_CAROLIEiJ_G0018538	Nop16	65	32.374	WBGene00013958	ZK265.6	80	30.625	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	ENSCAFG00000016694	NOP16	100	91.011	Canis_familiaris
MGP_CAROLIEiJ_G0018538	Nop16	99	91.477	ENSCAFG00020011505	-	98	88.587	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	ENSCHIG00000022082	-	100	91.573	Capra_hircus
MGP_CAROLIEiJ_G0018538	Nop16	99	90.960	ENSTSYG00000030409	-	99	90.960	Carlito_syrichta
MGP_CAROLIEiJ_G0018538	Nop16	100	73.034	ENSTSYG00000032690	-	100	73.034	Carlito_syrichta
MGP_CAROLIEiJ_G0018538	Nop16	100	89.888	ENSCPOG00000026072	-	100	89.888	Cavia_porcellus
MGP_CAROLIEiJ_G0018538	Nop16	96	82.353	ENSCCAG00000026775	-	100	80.925	Cebus_capucinus
MGP_CAROLIEiJ_G0018538	Nop16	100	89.326	ENSCLAG00000015405	-	100	89.326	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSCSAG00000009400	-	100	90.449	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018538	Nop16	99	73.596	ENSCPBG00000022647	-	99	73.596	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018538	Nop16	100	45.055	ENSCING00000006179	-	98	45.055	Ciona_intestinalis
MGP_CAROLIEiJ_G0018538	Nop16	95	41.765	ENSCSAVG00000000269	-	93	41.765	Ciona_savignyi
MGP_CAROLIEiJ_G0018538	Nop16	100	92.135	ENSCGRG00001004259	Nop16	100	92.135	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018538	Nop16	100	92.135	ENSCGRG00000010975	Nop16	100	92.135	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018538	Nop16	97	50.000	ENSCSEG00000020523	nop16	98	50.000	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018538	Nop16	97	51.744	ENSCVAG00000020140	nop16	97	51.744	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018538	Nop16	98	50.282	ENSDARG00000044402	nop16	99	50.282	Danio_rerio
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSDNOG00000042890	-	100	90.449	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018538	Nop16	100	89.888	ENSDORG00000008872	Nop16	100	89.888	Dipodomys_ordii
MGP_CAROLIEiJ_G0018538	Nop16	94	30.052	FBgn0039868	CG11563	88	31.746	Drosophila_melanogaster
MGP_CAROLIEiJ_G0018538	Nop16	93	43.023	ENSEBUG00000011196	nop16	95	43.023	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018538	Nop16	100	92.135	ENSEASG00005011988	-	100	92.135	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018538	Nop16	100	93.258	ENSECAG00000021354	NOP16	100	93.258	Equus_caballus
MGP_CAROLIEiJ_G0018538	Nop16	98	54.286	ENSELUG00000000401	nop16	98	54.286	Esox_lucius
MGP_CAROLIEiJ_G0018538	Nop16	100	92.697	ENSFCAG00000025473	-	100	92.697	Felis_catus
MGP_CAROLIEiJ_G0018538	Nop16	99	67.598	ENSFALG00000008553	-	99	67.598	Ficedula_albicollis
MGP_CAROLIEiJ_G0018538	Nop16	100	89.326	ENSFDAG00000000193	-	100	89.326	Fukomys_damarensis
MGP_CAROLIEiJ_G0018538	Nop16	96	54.118	ENSFHEG00000016452	nop16	95	54.118	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018538	Nop16	99	72.067	ENSGALG00000003355	-	99	72.067	Gallus_gallus
MGP_CAROLIEiJ_G0018538	Nop16	83	53.061	ENSGAFG00000011616	nop16	79	53.061	Gambusia_affinis
MGP_CAROLIEiJ_G0018538	Nop16	96	52.353	ENSGACG00000002618	-	98	52.353	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018538	Nop16	97	50.575	ENSGACG00000003122	-	99	52.991	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018538	Nop16	97	51.163	ENSGACG00000020819	-	98	51.765	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018538	Nop16	96	48.235	ENSGACG00000020810	nop16	100	48.235	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018538	Nop16	96	54.118	ENSHBUG00000013527	nop16	95	54.118	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	ENSHGLG00000013437	NOP16	100	91.011	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	ENSHGLG00100011375	NOP16	100	91.011	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018538	Nop16	97	50.000	ENSHCOG00000019999	nop16	99	50.000	Hippocampus_comes
MGP_CAROLIEiJ_G0018538	Nop16	96	47.647	ENSIPUG00000006682	nop16	96	47.647	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018538	Nop16	100	91.667	ENSSTOG00000004869	-	100	91.667	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018538	Nop16	100	92.697	ENSJJAG00000017655	Nop16	100	92.697	Jaculus_jaculus
MGP_CAROLIEiJ_G0018538	Nop16	96	54.118	ENSKMAG00000006164	nop16	95	54.118	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018538	Nop16	98	52.299	ENSLBEG00000018355	nop16	80	52.299	Labrus_bergylta
MGP_CAROLIEiJ_G0018538	Nop16	99	63.277	ENSLACG00000014884	nop16	100	63.277	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018538	Nop16	99	54.802	ENSLOCG00000012348	nop16	98	54.802	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	ENSLAFG00000017886	-	100	91.573	Loxodonta_africana
MGP_CAROLIEiJ_G0018538	Nop16	97	56.977	ENSMAMG00000021868	nop16	97	56.977	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018538	Nop16	96	54.706	ENSMZEG00005012112	nop16	95	54.706	Maylandia_zebra
MGP_CAROLIEiJ_G0018538	Nop16	57	67.327	ENSMGAG00000004726	-	99	67.327	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018538	Nop16	94	84.524	ENSMAUG00000015569	-	99	84.524	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018538	Nop16	60	92.453	ENSMAUG00000009852	-	100	92.453	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018538	Nop16	100	94.382	ENSMOCG00000020788	Nop16	100	94.382	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018538	Nop16	96	54.118	ENSMMOG00000016054	nop16	99	54.118	Mola_mola
MGP_CAROLIEiJ_G0018538	Nop16	100	78.889	ENSMODG00000005214	-	100	78.889	Monodelphis_domestica
MGP_CAROLIEiJ_G0018538	Nop16	96	52.632	ENSMALG00000021263	nop16	95	52.632	Monopterus_albus
MGP_CAROLIEiJ_G0018538	Nop16	100	99.438	ENSMUSG00000025869	Nop16	100	99.438	Mus_musculus
MGP_CAROLIEiJ_G0018538	Nop16	100	96.629	MGP_PahariEiJ_G0019603	Nop16	100	96.629	Mus_pahari
MGP_CAROLIEiJ_G0018538	Nop16	100	98.876	MGP_SPRETEiJ_G0019418	Nop16	100	98.876	Mus_spretus
MGP_CAROLIEiJ_G0018538	Nop16	100	93.258	ENSMPUG00000012552	-	100	93.258	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018538	Nop16	99	90.395	ENSMLUG00000003504	-	99	90.395	Myotis_lucifugus
MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	ENSNGAG00000018045	Nop16	100	91.573	Nannospalax_galili
MGP_CAROLIEiJ_G0018538	Nop16	96	53.529	ENSNBRG00000015181	nop16	96	53.529	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSODEG00000009586	-	100	90.449	Octodon_degus
MGP_CAROLIEiJ_G0018538	Nop16	96	56.471	ENSONIG00000016417	nop16	95	56.471	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSOCUG00000013171	-	100	90.449	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018538	Nop16	96	54.706	ENSORLG00000026611	nop16	95	54.706	Oryzias_latipes
MGP_CAROLIEiJ_G0018538	Nop16	96	58.235	ENSOMEG00000023001	nop16	95	58.235	Oryzias_melastigma
MGP_CAROLIEiJ_G0018538	Nop16	100	93.258	ENSOGAG00000000824	-	100	93.258	Otolemur_garnettii
MGP_CAROLIEiJ_G0018538	Nop16	100	91.573	ENSOARG00000002165	-	100	91.573	Ovis_aries
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSPPAG00000035473	-	100	90.449	Pan_paniscus
MGP_CAROLIEiJ_G0018538	Nop16	100	92.697	ENSPPRG00000016600	-	100	92.697	Panthera_pardus
MGP_CAROLIEiJ_G0018538	Nop16	100	92.135	ENSPTIG00000011708	-	100	92.135	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018538	Nop16	100	90.449	ENSPTRG00000017560	NOP16	100	90.449	Pan_troglodytes
MGP_CAROLIEiJ_G0018538	Nop16	99	52.542	ENSPKIG00000009587	nop16	99	52.542	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018538	Nop16	79	65.493	ENSPSIG00000013546	-	99	65.493	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018538	Nop16	94	53.846	ENSPMGG00000003443	nop16	98	53.846	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0018538	Nop16	100	94.944	ENSPEMG00000020268	Nop16	100	94.944	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018538	Nop16	100	81.667	ENSPCIG00000009782	-	100	81.667	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018538	Nop16	96	51.765	ENSPFOG00000010549	nop16	95	51.765	Poecilia_formosa
MGP_CAROLIEiJ_G0018538	Nop16	78	50.360	ENSPLAG00000007124	nop16	71	50.360	Poecilia_latipinna
MGP_CAROLIEiJ_G0018538	Nop16	96	51.765	ENSPMEG00000008611	nop16	95	51.765	Poecilia_mexicana
MGP_CAROLIEiJ_G0018538	Nop16	97	51.163	ENSPREG00000012940	nop16	97	51.744	Poecilia_reticulata
MGP_CAROLIEiJ_G0018538	Nop16	99	91.525	ENSPPYG00000016070	-	99	91.525	Pongo_abelii
MGP_CAROLIEiJ_G0018538	Nop16	96	54.706	ENSPNYG00000013529	nop16	95	54.706	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018538	Nop16	93	48.521	ENSPNAG00000016233	nop16	95	48.521	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018538	Nop16	100	95.506	ENSRNOG00000017284	Nop16	100	95.506	Rattus_norvegicus
MGP_CAROLIEiJ_G0018538	Nop16	100	81.006	ENSSHAG00000001724	-	100	81.006	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018538	Nop16	92	52.761	ENSSFOG00015010537	nop16	79	52.000	Scleropages_formosus
MGP_CAROLIEiJ_G0018538	Nop16	96	53.529	ENSSDUG00000022349	nop16	95	53.529	Seriola_dumerili
MGP_CAROLIEiJ_G0018538	Nop16	96	54.118	ENSSLDG00000025171	nop16	95	54.118	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018538	Nop16	73	76.923	ENSSARG00000006699	-	61	76.923	Sorex_araneus
MGP_CAROLIEiJ_G0018538	Nop16	99	69.886	ENSSPUG00000006508	-	98	69.886	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018538	Nop16	96	53.529	ENSSPAG00000011772	nop16	95	53.529	Stegastes_partitus
MGP_CAROLIEiJ_G0018538	Nop16	100	91.011	ENSSSCG00000029577	-	100	91.011	Sus_scrofa
MGP_CAROLIEiJ_G0018538	Nop16	99	71.508	ENSTGUG00000000543	-	99	71.508	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018538	Nop16	96	52.632	ENSTRUG00000020255	nop16	95	52.632	Takifugu_rubripes
MGP_CAROLIEiJ_G0018538	Nop16	96	53.801	ENSTNIG00000007616	nop16	95	53.801	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018538	Nop16	100	92.135	ENSUAMG00000005139	-	100	92.135	Ursus_americanus
MGP_CAROLIEiJ_G0018538	Nop16	99	92.045	ENSVVUG00000001697	-	98	89.130	Vulpes_vulpes
MGP_CAROLIEiJ_G0018538	Nop16	92	57.669	ENSXETG00000022342	nop16	95	57.669	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018538	Nop16	96	53.216	ENSXCOG00000018829	nop16	97	53.216	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0018538	Nop16	96	53.801	ENSXMAG00000029113	nop16	95	53.801	Xiphophorus_maculatus