EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018573 (Gene tree)
Gene ID: 110307943
Gene Symbol: Ddx46
Alias: 2200005K02Rik|8430438J23Rik
Full Name: DEAD-box helicase 46
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 50560 bases
Position: chr13:51028382-51078941
Accession: 110307943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034535	DEAD	PF00270.29	1.5e-50	1	1
MGP_CAROLIEiJ_P0034534	DEAD	PF00270.29	4.5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034535	-	5659	-	MGP_CAROLIEiJ_P0034535	1032 (aa)	XP_021035907	UPI000A319E1A
MGP_CAROLIEiJ_T0034534	-	5647	-	MGP_CAROLIEiJ_P0034534	1028 (aa)	-	-
MGP_CAROLIEiJ_T0034536	-	5513	-	MGP_CAROLIEiJ_P0034536	1031 (aa)	XP_021035908	UPI000A316A2C

Gene Model

Click here to download MGP_CAROLIEiJ_G0018573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.837	ENSG00000145833	DDX46	99	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.489	ENSAPOG00000000193	ddx46	95	82.158	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.547	ENSAMEG00000017873	DDX46	100	98.547	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.111	ENSACIG00000013235	ddx46	90	84.333	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018573	Ddx46	90	80.884	ENSAOCG00000007758	ddx46	95	78.542	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018573	Ddx46	90	80.987	ENSAPEG00000022648	ddx46	95	78.646	Amphiprion_percula
MGP_CAROLIEiJ_G0018573	Ddx46	86	81.410	ENSATEG00000012998	ddx46	91	81.779	Anabas_testudineus
MGP_CAROLIEiJ_G0018573	Ddx46	89	92.108	ENSAPLG00000013208	DDX46	89	92.117	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018573	Ddx46	85	92.281	ENSACAG00000001437	DDX46	100	92.281	Anolis_carolinensis
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSANAG00000032116	DDX46	100	98.740	Aotus_nancymaae
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.520	ENSACLG00000014804	ddx46	92	85.520	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018573	Ddx46	86	83.224	ENSAMXG00000008413	ddx46	89	81.768	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.547	ENSBTAG00000021520	DDX46	100	98.547	Bos_taurus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSCJAG00000005697	DDX46	100	98.740	Callithrix_jacchus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.643	ENSCAFG00000001048	DDX46	100	98.643	Canis_familiaris
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.642	ENSCAFG00020006070	DDX46	100	98.642	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.643	ENSCHIG00000026009	DDX46	100	98.643	Capra_hircus
MGP_CAROLIEiJ_G0018573	Ddx46	96	98.690	ENSTSYG00000003177	DDX46	100	98.690	Carlito_syrichta
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSCPOG00000011362	DDX46	100	98.740	Cavia_porcellus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSCCAG00000026721	DDX46	100	98.740	Cebus_capucinus
MGP_CAROLIEiJ_G0018573	Ddx46	100	94.762	ENSCATG00000040891	DDX46	100	94.762	Cercocebus_atys
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.934	ENSCLAG00000014581	DDX46	100	98.934	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018573	Ddx46	80	77.966	ENSCHOG00000005683	DDX46	80	77.723	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018573	Ddx46	85	93.417	ENSCPBG00000008261	DDX46	96	93.417	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018573	Ddx46	86	67.703	ENSCING00000006813	-	100	73.174	Ciona_intestinalis
MGP_CAROLIEiJ_G0018573	Ddx46	89	65.838	ENSCSAVG00000002353	-	97	77.083	Ciona_savignyi
MGP_CAROLIEiJ_G0018573	Ddx46	60	99.692	ENSCANG00000014766	DDX46	100	99.692	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018573	Ddx46	99	98.824	ENSCGRG00001024140	Ddx46	99	98.824	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018573	Ddx46	99	99.318	ENSCGRG00000005152	Ddx46	100	99.318	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018573	Ddx46	86	82.263	ENSCSEG00000016886	ddx46	94	81.502	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.573	ENSCVAG00000022900	ddx46	93	83.778	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.256	ENSDNOG00000011448	DDX46	100	98.256	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018573	Ddx46	90	91.027	ENSDORG00000005447	Ddx46	89	90.486	Dipodomys_ordii
MGP_CAROLIEiJ_G0018573	Ddx46	79	88.761	ENSETEG00000018455	DDX46	79	88.761	Echinops_telfairi
MGP_CAROLIEiJ_G0018573	Ddx46	98	94.955	ENSEASG00005020329	DDX46	100	94.955	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.642	ENSECAG00000018217	DDX46	100	98.642	Equus_caballus
MGP_CAROLIEiJ_G0018573	Ddx46	56	75.217	ENSEEUG00000003602	-	67	75.217	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.275	ENSELUG00000000817	ddx46	93	83.832	Esox_lucius
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.448	ENSFCAG00000026229	DDX46	100	98.448	Felis_catus
MGP_CAROLIEiJ_G0018573	Ddx46	85	93.864	ENSFALG00000007947	DDX46	100	93.864	Ficedula_albicollis
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSFDAG00000021262	DDX46	100	98.740	Fukomys_damarensis
MGP_CAROLIEiJ_G0018573	Ddx46	86	82.652	ENSFHEG00000020055	ddx46	93	82.854	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018573	Ddx46	89	82.953	ENSGMOG00000007990	ddx46	91	82.162	Gadus_morhua
MGP_CAROLIEiJ_G0018573	Ddx46	90	91.923	ENSGALG00000006404	DDX46	90	92.004	Gallus_gallus
MGP_CAROLIEiJ_G0018573	Ddx46	86	78.271	ENSGAFG00000007153	ddx46	91	78.049	Gambusia_affinis
MGP_CAROLIEiJ_G0018573	Ddx46	89	83.769	ENSGACG00000000166	ddx46	91	82.505	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018573	Ddx46	90	92.299	ENSGAGG00000014910	DDX46	90	92.390	Gopherus_agassizii
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.836	ENSGGOG00000013843	DDX46	100	98.836	Gorilla_gorilla
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.601	ENSHBUG00000021074	ddx46	92	85.633	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.643	ENSHGLG00000010455	DDX46	100	98.643	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.643	ENSHGLG00100016515	DDX46	100	98.643	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018573	Ddx46	100	76.714	ENSIPUG00000002564	ddx46	90	82.371	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018573	Ddx46	65	99.400	ENSSTOG00000025564	DDX46	75	99.391	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.254	ENSJJAG00000013906	Ddx46	100	98.254	Jaculus_jaculus
MGP_CAROLIEiJ_G0018573	Ddx46	90	79.385	ENSKMAG00000019510	ddx46	91	79.692	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018573	Ddx46	86	81.559	ENSLBEG00000027425	ddx46	94	81.339	Labrus_bergylta
MGP_CAROLIEiJ_G0018573	Ddx46	100	87.391	ENSLACG00000007965	DDX46	90	90.130	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018573	Ddx46	89	85.956	ENSLOCG00000010169	ddx46	90	86.120	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.258	ENSLAFG00000010465	DDX46	100	98.258	Loxodonta_africana
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.740	ENSMFAG00000044528	DDX46	100	98.740	Macaca_fascicularis
MGP_CAROLIEiJ_G0018573	Ddx46	96	98.483	ENSMMUG00000012463	DDX46	96	98.483	Macaca_mulatta
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.739	ENSMNEG00000029903	DDX46	100	98.739	Macaca_nemestrina
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.739	ENSMLEG00000033516	DDX46	100	98.739	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018573	Ddx46	86	86.054	ENSMAMG00000021755	ddx46	91	83.965	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.520	ENSMZEG00005008989	ddx46	92	85.520	Maylandia_zebra
MGP_CAROLIEiJ_G0018573	Ddx46	90	93.204	ENSMGAG00000008226	DDX46	90	93.290	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018573	Ddx46	99	99.217	ENSMAUG00000003267	Ddx46	100	99.217	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018573	Ddx46	100	94.277	ENSMICG00000028626	DDX46	100	94.277	Microcebus_murinus
MGP_CAROLIEiJ_G0018573	Ddx46	98	91.634	ENSMOCG00000012141	Ddx46	99	91.634	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.488	ENSMMOG00000013470	ddx46	91	85.714	Mola_mola
MGP_CAROLIEiJ_G0018573	Ddx46	100	96.221	ENSMODG00000014331	DDX46	100	96.221	Monodelphis_domestica
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.437	ENSMALG00000016796	ddx46	92	83.554	Monopterus_albus
MGP_CAROLIEiJ_G0018573	Ddx46	100	99.903	ENSMUSG00000021500	Ddx46	100	99.903	Mus_musculus
MGP_CAROLIEiJ_G0018573	Ddx46	100	99.709	MGP_PahariEiJ_G0019638	Ddx46	100	99.709	Mus_pahari
MGP_CAROLIEiJ_G0018573	Ddx46	100	99.903	MGP_SPRETEiJ_G0019453	Ddx46	100	99.903	Mus_spretus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.547	ENSMPUG00000010045	DDX46	100	98.547	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.354	ENSMLUG00000012607	DDX46	100	98.354	Myotis_lucifugus
MGP_CAROLIEiJ_G0018573	Ddx46	94	98.651	ENSNGAG00000020157	Ddx46	97	98.651	Nannospalax_galili
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.374	ENSNBRG00000008155	ddx46	92	85.601	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.837	ENSNLEG00000008167	DDX46	100	98.837	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018573	Ddx46	59	97.717	ENSMEUG00000014890	-	60	97.717	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018573	Ddx46	100	97.381	ENSOPRG00000006646	DDX46	100	97.381	Ochotona_princeps
MGP_CAROLIEiJ_G0018573	Ddx46	99	98.734	ENSODEG00000010023	DDX46	100	98.734	Octodon_degus
MGP_CAROLIEiJ_G0018573	Ddx46	100	80.676	ENSONIG00000017282	ddx46	91	82.992	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018573	Ddx46	90	93.757	ENSOANG00000001842	DDX46	96	93.946	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.161	ENSOCUG00000012206	DDX46	100	98.161	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018573	Ddx46	86	83.444	ENSORLG00000000903	ddx46	93	83.648	Oryzias_latipes
MGP_CAROLIEiJ_G0018573	Ddx46	86	83.444	ENSORLG00020022093	ddx46	93	83.648	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018573	Ddx46	86	83.444	ENSORLG00015007282	ddx46	93	83.648	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018573	Ddx46	90	79.261	ENSOMEG00000003338	ddx46	94	83.241	Oryzias_melastigma
MGP_CAROLIEiJ_G0018573	Ddx46	90	88.052	ENSOGAG00000011690	-	90	88.052	Otolemur_garnettii
MGP_CAROLIEiJ_G0018573	Ddx46	100	96.512	ENSOGAG00000034921	-	100	96.512	Otolemur_garnettii
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.548	ENSOARG00000014348	DDX46	100	98.548	Ovis_aries
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.836	ENSPPAG00000037804	DDX46	100	98.836	Pan_paniscus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.448	ENSPPRG00000010743	DDX46	100	98.448	Panthera_pardus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.157	ENSPTIG00000012382	DDX46	99	98.157	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.836	ENSPTRG00000017248	DDX46	100	98.836	Pan_troglodytes
MGP_CAROLIEiJ_G0018573	Ddx46	90	94.073	ENSPANG00000025084	DDX46	98	88.544	Papio_anubis
MGP_CAROLIEiJ_G0018573	Ddx46	100	79.962	ENSPKIG00000010351	ddx46	90	85.111	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018573	Ddx46	90	92.803	ENSPSIG00000004522	DDX46	90	92.803	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018573	Ddx46	100	99.516	ENSPEMG00000013593	Ddx46	100	99.516	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018573	Ddx46	86	77.018	ENSPMAG00000007922	ddx46	86	74.807	Petromyzon_marinus
MGP_CAROLIEiJ_G0018573	Ddx46	86	96.953	ENSPCIG00000009215	DDX46	100	97.251	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018573	Ddx46	86	81.070	ENSPFOG00000004966	ddx46	87	80.942	Poecilia_formosa
MGP_CAROLIEiJ_G0018573	Ddx46	88	81.720	ENSPLAG00000023562	ddx46	90	83.278	Poecilia_latipinna
MGP_CAROLIEiJ_G0018573	Ddx46	88	83.058	ENSPMEG00000013401	ddx46	95	80.611	Poecilia_mexicana
MGP_CAROLIEiJ_G0018573	Ddx46	86	81.750	ENSPREG00000005444	ddx46	87	80.876	Poecilia_reticulata
MGP_CAROLIEiJ_G0018573	Ddx46	90	86.919	ENSPPYG00000015792	DDX46	69	95.754	Pongo_abelii
MGP_CAROLIEiJ_G0018573	Ddx46	86	94.631	ENSPCAG00000012364	DDX46	86	94.631	Procavia_capensis
MGP_CAROLIEiJ_G0018573	Ddx46	71	96.429	ENSPCOG00000018969	DDX46	94	84.389	Propithecus_coquereli
MGP_CAROLIEiJ_G0018573	Ddx46	100	97.187	ENSPVAG00000015655	DDX46	100	97.187	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.424	ENSPNYG00000012327	ddx46	92	84.424	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018573	Ddx46	84	84.607	ENSPNAG00000010806	ddx46	86	84.797	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018573	Ddx46	100	99.322	ENSRNOG00000021637	Ddx46	100	99.322	Rattus_norvegicus
MGP_CAROLIEiJ_G0018573	Ddx46	81	99.533	ENSRBIG00000041150	DDX46	69	95.691	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.739	ENSRROG00000029467	DDX46	100	98.739	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018573	Ddx46	83	99.349	ENSSBOG00000027666	DDX46	88	99.349	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018573	Ddx46	100	96.221	ENSSHAG00000014408	DDX46	89	96.221	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018573	Ddx46	90	81.988	ENSSFOG00015020093	ddx46	93	84.262	Scleropages_formosus
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.462	ENSSMAG00000007229	ddx46	89	83.685	Scophthalmus_maximus
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.601	ENSSDUG00000020991	ddx46	92	85.601	Seriola_dumerili
MGP_CAROLIEiJ_G0018573	Ddx46	86	85.601	ENSSLDG00000016854	ddx46	92	85.601	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018573	Ddx46	86	91.516	ENSSARG00000011073	DDX46	100	91.516	Sorex_araneus
MGP_CAROLIEiJ_G0018573	Ddx46	90	88.805	ENSSPUG00000008985	DDX46	100	92.972	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018573	Ddx46	91	80.394	ENSSPAG00000017946	ddx46	95	80.187	Stegastes_partitus
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.450	ENSSSCG00000026644	DDX46	100	98.450	Sus_scrofa
MGP_CAROLIEiJ_G0018573	Ddx46	90	93.441	ENSTGUG00000001260	-	90	93.441	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018573	Ddx46	88	88.889	ENSTRUG00000008878	ddx46	91	78.936	Takifugu_rubripes
MGP_CAROLIEiJ_G0018573	Ddx46	86	84.831	ENSTNIG00000016100	ddx46	87	85.169	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018573	Ddx46	81	100.000	ENSTBEG00000002799	DDX46	81	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0018573	Ddx46	90	90.703	ENSTTRG00000016869	DDX46	90	90.703	Tursiops_truncatus
MGP_CAROLIEiJ_G0018573	Ddx46	100	96.023	ENSUMAG00000017446	DDX46	100	96.023	Ursus_maritimus
MGP_CAROLIEiJ_G0018573	Ddx46	100	95.833	ENSVPAG00000001591	DDX46	100	95.833	Vicugna_pacos
MGP_CAROLIEiJ_G0018573	Ddx46	100	98.643	ENSVVUG00000017549	DDX46	100	98.643	Vulpes_vulpes
MGP_CAROLIEiJ_G0018573	Ddx46	89	87.324	ENSXETG00000010405	ddx46	90	87.191	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018573	Ddx46	88	86.207	ENSXCOG00000004162	ddx46	95	79.590	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0018573	Ddx46	92	80.498	ENSXMAG00000008312	ddx46	95	84.035	Xiphophorus_maculatus