EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018612 (Gene tree)
Gene ID: 110308585
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 50546 bases
Position: chr13:55156746-55207291
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034665	zf-CCHC	PF00098.23	1.2e-13	1	3
MGP_CAROLIEiJ_P0034665	zf-CCHC	PF00098.23	1.2e-13	2	3
MGP_CAROLIEiJ_P0034665	zf-CCHC	PF00098.23	1.2e-13	3	3
MGP_CAROLIEiJ_P0034665	PAP_assoc	PF03828.19	7.8e-28	1	2
MGP_CAROLIEiJ_P0034665	PAP_assoc	PF03828.19	7.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034665	-	5142	-	MGP_CAROLIEiJ_P0034665	1538 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0018612	-	66	68.171	MGP_CAROLIEiJ_G0026268	Tut4	58	59.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018612	-	100	79.444	ENSG00000083223	TUT7	100	95.968	Homo_sapiens
MGP_CAROLIEiJ_G0018612	-	58	72.500	ENSAPOG00000012979	TUT7	79	72.500	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018612	-	100	78.396	ENSAMEG00000004148	TUT7	100	78.396	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018612	-	63	65.405	ENSAOCG00000004223	-	87	52.727	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018612	-	100	60.369	ENSAPLG00000015510	TUT7	100	60.115	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018612	-	55	84.211	ENSACAG00000000279	TUT7	85	84.211	Anolis_carolinensis
MGP_CAROLIEiJ_G0018612	-	100	79.172	ENSANAG00000025848	TUT7	100	85.043	Aotus_nancymaae
MGP_CAROLIEiJ_G0018612	-	59	70.270	ENSACLG00000018198	TUT7	72	70.270	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018612	-	100	79.948	ENSBTAG00000001737	TUT7	100	79.819	Bos_taurus
MGP_CAROLIEiJ_G0018612	-	100	78.784	ENSCJAG00000001845	TUT7	100	85.675	Callithrix_jacchus
MGP_CAROLIEiJ_G0018612	-	100	81.343	ENSCAFG00000001331	TUT7	100	81.202	Canis_familiaris
MGP_CAROLIEiJ_G0018612	-	99	80.446	ENSCAFG00020023620	TUT7	99	80.433	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018612	-	100	80.206	ENSCHIG00000017690	TUT7	100	80.013	Capra_hircus
MGP_CAROLIEiJ_G0018612	-	100	78.655	ENSTSYG00000008907	TUT7	100	85.124	Carlito_syrichta
MGP_CAROLIEiJ_G0018612	-	100	75.838	ENSCPOG00000002500	TUT7	100	75.966	Cavia_porcellus
MGP_CAROLIEiJ_G0018612	-	100	80.762	ENSCATG00000032888	TUT7	100	84.402	Cercocebus_atys
MGP_CAROLIEiJ_G0018612	-	100	75.485	ENSCLAG00000007535	TUT7	100	75.226	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018612	-	100	78.862	ENSCSAG00000007408	TUT7	100	78.539	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018612	-	100	73.050	ENSCHOG00000011129	TUT7	100	73.114	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018612	-	100	64.349	ENSCPBG00000005272	TUT7	100	64.326	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018612	-	100	79.172	ENSCANG00000035790	TUT7	100	84.848	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018612	-	96	86.284	ENSCGRG00001020605	-	99	86.216	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018612	-	100	86.252	ENSCGRG00000016585	-	100	86.187	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018612	-	64	60.000	ENSCSEG00000007068	TUT7	86	59.729	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018612	-	63	57.000	ENSCVAG00000012526	-	78	57.311	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018612	-	59	63.682	ENSDARG00000074645	CABZ01032476.1	71	63.682	Danio_rerio
MGP_CAROLIEiJ_G0018612	-	100	79.355	ENSDNOG00000010663	TUT7	98	81.818	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018612	-	78	73.501	ENSDORG00000009046	-	99	73.861	Dipodomys_ordii
MGP_CAROLIEiJ_G0018612	-	83	83.836	ENSETEG00000007739	TUT7	83	83.836	Echinops_telfairi
MGP_CAROLIEiJ_G0018612	-	100	81.173	ENSEASG00005020165	TUT7	100	80.916	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018612	-	100	81.173	ENSECAG00000014831	TUT7	100	80.916	Equus_caballus
MGP_CAROLIEiJ_G0018612	-	96	67.502	ENSEEUG00000012794	TUT7	100	67.321	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018612	-	66	61.938	ENSELUG00000013049	-	95	54.483	Esox_lucius
MGP_CAROLIEiJ_G0018612	-	100	79.638	ENSFCAG00000003491	TUT7	100	86.226	Felis_catus
MGP_CAROLIEiJ_G0018612	-	100	59.974	ENSFALG00000003541	TUT7	100	59.757	Ficedula_albicollis
MGP_CAROLIEiJ_G0018612	-	100	77.469	ENSFDAG00000002315	TUT7	100	77.663	Fukomys_damarensis
MGP_CAROLIEiJ_G0018612	-	59	62.030	ENSFHEG00000004770	-	70	62.030	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018612	-	57	74.402	ENSGMOG00000001464	-	78	74.699	Gadus_morhua
MGP_CAROLIEiJ_G0018612	-	100	61.450	ENSGALG00000012607	ZCCHC6	100	60.442	Gallus_gallus
MGP_CAROLIEiJ_G0018612	-	53	63.918	ENSGAFG00000017141	-	79	63.918	Gambusia_affinis
MGP_CAROLIEiJ_G0018612	-	62	65.103	ENSGACG00000004735	TUT7	90	69.647	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018612	-	97	62.114	ENSGAGG00000013087	TUT7	99	62.060	Gopherus_agassizii
MGP_CAROLIEiJ_G0018612	-	100	79.690	ENSGGOG00000007523	ZCCHC6	100	85.124	Gorilla_gorilla
MGP_CAROLIEiJ_G0018612	-	96	77.912	ENSHGLG00000018427	TUT7	99	77.845	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018612	-	96	77.845	ENSHGLG00100004701	TUT7	99	77.778	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018612	-	96	81.861	ENSSTOG00000000586	TUT7	99	81.929	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018612	-	83	74.292	ENSJJAG00000000106	-	99	76.180	Jaculus_jaculus
MGP_CAROLIEiJ_G0018612	-	52	66.029	ENSLBEG00000015545	-	75	54.779	Labrus_bergylta
MGP_CAROLIEiJ_G0018612	-	99	55.915	ENSLACG00000001637	TUT7	100	56.380	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018612	-	96	52.538	ENSLOCG00000002472	TUT7	84	63.312	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018612	-	83	72.798	ENSLAFG00000007884	TUT7	100	73.913	Loxodonta_africana
MGP_CAROLIEiJ_G0018612	-	100	80.633	ENSMFAG00000000971	TUT7	100	84.402	Macaca_fascicularis
MGP_CAROLIEiJ_G0018612	-	100	80.633	ENSMMUG00000003401	TUT7	100	84.402	Macaca_mulatta
MGP_CAROLIEiJ_G0018612	-	100	80.568	ENSMNEG00000031427	TUT7	100	84.402	Macaca_nemestrina
MGP_CAROLIEiJ_G0018612	-	100	78.978	ENSMLEG00000027049	TUT7	100	84.402	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018612	-	55	69.915	ENSMAMG00000011815	TUT7	95	54.250	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018612	-	60	70.270	ENSMZEG00005012809	TUT7	72	70.270	Maylandia_zebra
MGP_CAROLIEiJ_G0018612	-	96	56.927	ENSMGAG00000006542	TUT7	99	56.936	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018612	-	100	81.100	ENSMAUG00000006963	-	100	81.230	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018612	-	91	84.615	ENSMICG00000016944	TUT7	100	84.615	Microcebus_murinus
MGP_CAROLIEiJ_G0018612	-	77	81.227	ENSMOCG00000007812	-	100	81.227	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018612	-	99	65.345	ENSMODG00000003542	TUT7	99	65.672	Monodelphis_domestica
MGP_CAROLIEiJ_G0018612	-	61	59.863	ENSMALG00000000634	TUT7	90	54.082	Monopterus_albus
MGP_CAROLIEiJ_G0018612	-	96	97.969	ENSMUSG00000035248	Tut7	99	97.969	Mus_musculus
MGP_CAROLIEiJ_G0018612	-	96	95.264	MGP_PahariEiJ_G0019676	-	99	95.196	Mus_pahari
MGP_CAROLIEiJ_G0018612	-	96	97.969	MGP_SPRETEiJ_G0019491	-	99	97.969	Mus_spretus
MGP_CAROLIEiJ_G0018612	-	100	80.504	ENSMPUG00000002191	TUT7	100	80.245	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018612	-	100	75.953	ENSMLUG00000001298	TUT7	100	75.889	Myotis_lucifugus
MGP_CAROLIEiJ_G0018612	-	78	78.031	ENSNGAG00000022758	-	99	77.551	Nannospalax_galili
MGP_CAROLIEiJ_G0018612	-	66	70.270	ENSNBRG00000021961	TUT7	79	70.270	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018612	-	100	79.301	ENSNLEG00000005138	TUT7	100	85.399	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018612	-	84	72.848	ENSMEUG00000006540	TUT7	79	72.848	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018612	-	100	75.462	ENSOPRG00000002893	TUT7	93	75.462	Ochotona_princeps
MGP_CAROLIEiJ_G0018612	-	74	75.553	ENSODEG00000006904	-	97	75.966	Octodon_degus
MGP_CAROLIEiJ_G0018612	-	67	60.938	ENSONIG00000017001	TUT7	86	65.830	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018612	-	100	77.106	ENSOCUG00000010949	TUT7	95	76.913	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018612	-	62	48.089	ENSORLG00000001714	-	97	44.473	Oryzias_latipes
MGP_CAROLIEiJ_G0018612	-	56	55.515	ENSORLG00020007882	-	70	55.515	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018612	-	58	61.914	ENSOMEG00000015528	-	83	51.768	Oryzias_melastigma
MGP_CAROLIEiJ_G0018612	-	100	79.728	ENSOGAG00000015630	TUT7	100	79.469	Otolemur_garnettii
MGP_CAROLIEiJ_G0018612	-	100	80.142	ENSOARG00000008732	TUT7	100	79.948	Ovis_aries
MGP_CAROLIEiJ_G0018612	-	100	81.278	ENSPPAG00000038548	TUT7	100	85.124	Pan_paniscus
MGP_CAROLIEiJ_G0018612	-	92	86.501	ENSPPRG00000011084	TUT7	100	86.501	Panthera_pardus
MGP_CAROLIEiJ_G0018612	-	92	86.501	ENSPTIG00000007881	TUT7	100	86.501	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018612	-	100	81.343	ENSPTRG00000021076	TUT7	100	85.124	Pan_troglodytes
MGP_CAROLIEiJ_G0018612	-	96	78.538	ENSPANG00000024890	TUT7	100	80.205	Papio_anubis
MGP_CAROLIEiJ_G0018612	-	81	65.365	ENSPKIG00000022326	TUT7	81	65.365	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018612	-	100	64.272	ENSPSIG00000003600	TUT7	100	63.954	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018612	-	100	86.308	ENSPEMG00000014030	-	100	86.308	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0018612	-	100	66.433	ENSPCIG00000018302	TUT7	100	66.138	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018612	-	59	72.893	ENSPFOG00000011606	-	82	72.523	Poecilia_formosa
MGP_CAROLIEiJ_G0018612	-	59	64.516	ENSPLAG00000006121	TUT7	96	55.556	Poecilia_latipinna
MGP_CAROLIEiJ_G0018612	-	60	63.653	ENSPREG00000009118	TUT7	79	63.653	Poecilia_reticulata
MGP_CAROLIEiJ_G0018612	-	100	79.431	ENSPPYG00000019340	TUT7	99	81.174	Pongo_abelii
MGP_CAROLIEiJ_G0018612	-	72	80.303	ENSPCAG00000011630	TUT7	66	80.303	Procavia_capensis
MGP_CAROLIEiJ_G0018612	-	100	79.897	ENSPCOG00000023407	TUT7	100	85.950	Propithecus_coquereli
MGP_CAROLIEiJ_G0018612	-	91	72.045	ENSPVAG00000004589	TUT7	100	72.116	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018612	-	59	70.270	ENSPNYG00000004149	TUT7	72	70.270	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018612	-	96	92.505	ENSRNOG00000016629	Tut7	99	92.370	Rattus_norvegicus
MGP_CAROLIEiJ_G0018612	-	92	84.298	ENSRBIG00000016827	TUT7	100	84.402	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018612	-	100	79.107	ENSRROG00000034432	TUT7	100	84.573	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018612	-	99	65.974	ENSSHAG00000008290	TUT7	99	66.234	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018612	-	99	48.435	ENSSFOG00015009813	zcchc6	82	65.940	Scleropages_formosus
MGP_CAROLIEiJ_G0018612	-	58	77.143	ENSSDUG00000012876	TUT7	86	77.143	Seriola_dumerili
MGP_CAROLIEiJ_G0018612	-	87	72.457	ENSSARG00000009763	TUT7	91	72.098	Sorex_araneus
MGP_CAROLIEiJ_G0018612	-	96	64.167	ENSSPUG00000004029	TUT7	99	64.480	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018612	-	60	53.271	ENSSPAG00000018387	-	94	53.110	Stegastes_partitus
MGP_CAROLIEiJ_G0018612	-	100	80.323	ENSSSCG00000010952	TUT7	100	80.516	Sus_scrofa
MGP_CAROLIEiJ_G0018612	-	99	60.425	ENSTGUG00000000624	TUT7	100	60.051	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018612	-	62	62.879	ENSTNIG00000015951	TUT7	91	63.883	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018612	-	99	71.568	ENSTBEG00000010446	TUT7	99	71.698	Tupaia_belangeri
MGP_CAROLIEiJ_G0018612	-	94	78.429	ENSTTRG00000004236	TUT7	94	78.429	Tursiops_truncatus
MGP_CAROLIEiJ_G0018612	-	62	87.069	ENSUAMG00000027094	-	95	87.069	Ursus_americanus
MGP_CAROLIEiJ_G0018612	-	96	81.216	ENSUMAG00000004929	TUT7	98	80.946	Ursus_maritimus
MGP_CAROLIEiJ_G0018612	-	97	86.913	ENSVPAG00000001946	TUT7	94	86.913	Vicugna_pacos
MGP_CAROLIEiJ_G0018612	-	100	81.149	ENSVVUG00000022427	TUT7	100	81.008	Vulpes_vulpes
MGP_CAROLIEiJ_G0018612	-	75	64.098	ENSXCOG00000009445	-	84	63.534	Xiphophorus_couchianus