EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018683 (Gene tree)
Gene ID: -
Gene Symbol: Zfp493
Alias: 2900054J07Rik
Full Name: zinc finger protein 493
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 12889 bases
Position: chr13:63044798-63057686
Accession: 1920208
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	1	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	2	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	3	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	4	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	5	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	6	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	7	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	8	9
MGP_CAROLIEiJ_P0034815	zf-C2H2	PF00096.26	2.2e-49	9	9
MGP_CAROLIEiJ_P0034815	zf-met	PF12874.7	0.00058	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0034816	-	3816	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0034814	-	646	-	MGP_CAROLIEiJ_P0034814	111 (aa)	-	-
MGP_CAROLIEiJ_T0034815	-	3212	-	MGP_CAROLIEiJ_P0034815	384 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0018683	Zfp493	99	56.747	MGP_CAROLIEiJ_G0019949	Zfp251	95	56.747
MGP_CAROLIEiJ_G0018683	Zfp493	81	49.412	MGP_CAROLIEiJ_G0016391	Zfp672	98	45.000
MGP_CAROLIEiJ_G0018683	Zfp493	84	37.121	MGP_CAROLIEiJ_G0029143	-	79	37.132
MGP_CAROLIEiJ_G0018683	Zfp493	87	42.662	MGP_CAROLIEiJ_G0026744	Zbtb17	56	42.662
MGP_CAROLIEiJ_G0018683	Zfp493	99	50.699	MGP_CAROLIEiJ_G0021132	Zfp948	97	50.699
MGP_CAROLIEiJ_G0018683	Zfp493	92	38.390	MGP_CAROLIEiJ_G0028343	Repin1	98	38.390
MGP_CAROLIEiJ_G0018683	Zfp493	98	64.407	MGP_CAROLIEiJ_G0029612	Zfp141	65	64.407
MGP_CAROLIEiJ_G0018683	Zfp493	99	54.221	MGP_CAROLIEiJ_G0029614	Zfp715	76	54.762
MGP_CAROLIEiJ_G0018683	Zfp493	85	38.132	MGP_CAROLIEiJ_G0014667	Zbtb41	50	33.013
MGP_CAROLIEiJ_G0018683	Zfp493	80	39.044	MGP_CAROLIEiJ_G0024724	Zfp64	70	39.044
MGP_CAROLIEiJ_G0018683	Zfp493	81	62.581	MGP_CAROLIEiJ_G0029490	Zfp420	97	62.581
MGP_CAROLIEiJ_G0018683	Zfp493	99	43.210	MGP_CAROLIEiJ_G0024261	Zfp661	94	43.210
MGP_CAROLIEiJ_G0018683	Zfp493	99	53.869	MGP_CAROLIEiJ_G0016306	Zfp354a	97	55.949
MGP_CAROLIEiJ_G0018683	Zfp493	83	52.356	MGP_CAROLIEiJ_G0029135	Zfp628	60	46.154
MGP_CAROLIEiJ_G0018683	Zfp493	99	50.164	MGP_CAROLIEiJ_G0029427	-	98	50.164
MGP_CAROLIEiJ_G0018683	Zfp493	99	50.149	MGP_CAROLIEiJ_G0031203	Zfp882	99	50.149
MGP_CAROLIEiJ_G0018683	Zfp493	90	40.000	MGP_CAROLIEiJ_G0022445	Zfp236	60	40.000
MGP_CAROLIEiJ_G0018683	Zfp493	80	47.761	MGP_CAROLIEiJ_G0027508	Gfi1	100	47.761
MGP_CAROLIEiJ_G0018683	Zfp493	83	48.708	MGP_CAROLIEiJ_G0018274	Zkscan4	54	49.084
MGP_CAROLIEiJ_G0018683	Zfp493	99	43.750	MGP_CAROLIEiJ_G0020389	Zfp597	96	43.750
MGP_CAROLIEiJ_G0018683	Zfp493	98	43.868	MGP_CAROLIEiJ_G0030501	Zfp764	94	43.868
MGP_CAROLIEiJ_G0018683	Zfp493	98	43.868	MGP_CAROLIEiJ_G0030502	-	94	43.868
MGP_CAROLIEiJ_G0018683	Zfp493	92	41.919	MGP_CAROLIEiJ_G0031579	Zfp1	98	41.919
MGP_CAROLIEiJ_G0018683	Zfp493	88	35.455	MGP_CAROLIEiJ_G0029356	Zfp574	71	36.061
MGP_CAROLIEiJ_G0018683	Zfp493	95	55.000	MGP_CAROLIEiJ_G0029326	Zfp108	77	55.000
MGP_CAROLIEiJ_G0018683	Zfp493	94	53.746	MGP_CAROLIEiJ_G0029327	Zfp93	74	54.902
MGP_CAROLIEiJ_G0018683	Zfp493	92	56.391	MGP_CAROLIEiJ_G0029324	Zfp111	79	56.391
MGP_CAROLIEiJ_G0018683	Zfp493	96	55.949	MGP_CAROLIEiJ_G0029322	Zfp235	79	55.949
MGP_CAROLIEiJ_G0018683	Zfp493	100	55.049	MGP_CAROLIEiJ_G0029321	Zfp112	98	55.049
MGP_CAROLIEiJ_G0018683	Zfp493	87	55.319	MGP_CAROLIEiJ_G0029329	Zfp94	97	55.319
MGP_CAROLIEiJ_G0018683	Zfp493	99	54.723	MGP_CAROLIEiJ_G0018661	Zfp759	100	54.723
MGP_CAROLIEiJ_G0018683	Zfp493	99	55.588	MGP_CAROLIEiJ_G0018660	-	76	55.588
MGP_CAROLIEiJ_G0018683	Zfp493	81	41.964	MGP_CAROLIEiJ_G0031420	Zfp319	85	40.989
MGP_CAROLIEiJ_G0018683	Zfp493	99	49.533	MGP_CAROLIEiJ_G0016437	Zfp867	95	50.000
MGP_CAROLIEiJ_G0018683	Zfp493	99	55.063	MGP_CAROLIEiJ_G0015655	-	93	55.063
MGP_CAROLIEiJ_G0018683	Zfp493	85	45.876	MGP_CAROLIEiJ_G0027176	Zbtb49	66	48.611
MGP_CAROLIEiJ_G0018683	Zfp493	83	31.556	MGP_CAROLIEiJ_G0029146	Zfp784	69	47.000
MGP_CAROLIEiJ_G0018683	Zfp493	84	40.741	MGP_CAROLIEiJ_G0029144	-	68	34.483
MGP_CAROLIEiJ_G0018683	Zfp493	81	54.386	MGP_CAROLIEiJ_G0030498	Zfp768	55	54.386
MGP_CAROLIEiJ_G0018683	Zfp493	86	44.068	MGP_CAROLIEiJ_G0028463	Prdm5	84	40.357
MGP_CAROLIEiJ_G0018683	Zfp493	99	51.955	MGP_CAROLIEiJ_G0021128	Zfp51	94	51.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018683	Zfp493	87	54.857	ENSAOCG00000013672	-	97	54.688	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018683	Zfp493	87	54.138	ENSACLG00000008821	-	94	54.138	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018683	Zfp493	84	57.190	ENSAMXG00000043423	-	78	57.190	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018683	Zfp493	82	57.874	ENSAMXG00000037981	-	74	57.874	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018683	Zfp493	82	55.973	ENSAMXG00000040677	-	84	55.973	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018683	Zfp493	79	54.167	ENSAMXG00000036633	-	62	54.054	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018683	Zfp493	83	53.214	ENSAMXG00000036241	-	89	53.214	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018683	Zfp493	98	58.710	ENSTSYG00000006246	-	99	58.710	Carlito_syrichta
MGP_CAROLIEiJ_G0018683	Zfp493	99	53.281	ENSCGRG00001024303	-	98	54.745	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018683	Zfp493	99	54.286	ENSCGRG00001012803	-	94	54.286	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018683	Zfp493	88	54.412	ENSCGRG00001019143	-	85	54.412	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018683	Zfp493	99	54.286	ENSCGRG00000009742	-	94	54.286	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018683	Zfp493	92	55.932	ENSCGRG00000008531	-	98	55.932	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018683	Zfp493	99	50.489	ENSEBUG00000003590	-	80	50.489	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	81	56.842	ENSEBUG00000015834	-	83	56.842	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	87	46.392	ENSEBUG00000015993	-	60	46.392	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	84	50.987	ENSEBUG00000017017	-	70	47.670	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	84	49.511	ENSEBUG00000001121	-	80	49.511	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	87	48.993	ENSEBUG00000007375	-	83	48.993	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	80	49.718	ENSEBUG00000003236	-	93	49.171	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018683	Zfp493	82	50.825	ENSIPUG00000013315	-	96	50.825	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018683	Zfp493	96	53.678	ENSMAUG00000005691	-	89	53.678	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018683	Zfp493	99	52.555	ENSMAUG00000016437	-	100	54.221	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018683	Zfp493	88	56.047	ENSMOCG00000000365	-	93	56.047	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018683	Zfp493	99	57.605	ENSMUSG00000091474	2610021A01Rik	72	57.605	Mus_musculus
MGP_CAROLIEiJ_G0018683	Zfp493	96	55.556	ENSMUSG00000074824	Rslcan18	80	55.556	Mus_musculus
MGP_CAROLIEiJ_G0018683	Zfp493	98	61.017	MGP_PahariEiJ_G0012839	-	72	61.017	Mus_pahari
MGP_CAROLIEiJ_G0018683	Zfp493	99	55.882	MGP_SPRETEiJ_G0019543	-	78	55.882	Mus_spretus
MGP_CAROLIEiJ_G0018683	Zfp493	81	55.172	ENSPMAG00000000404	-	99	55.172	Petromyzon_marinus
MGP_CAROLIEiJ_G0018683	Zfp493	87	58.915	ENSPNAG00000003017	-	98	58.915	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018683	Zfp493	81	58.170	ENSPNAG00000014492	-	88	58.170	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018683	Zfp493	99	63.137	ENSSSCG00000040389	-	99	63.137	Sus_scrofa
MGP_CAROLIEiJ_G0018683	Zfp493	82	45.161	ENSTRUG00000014476	-	89	45.161	Takifugu_rubripes