EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018758 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 366 bases
Position: chr13:84439693-84440058
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0035057	Ribosomal_L23	PF00276.20	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0035057	-	366	-	MGP_CAROLIEiJ_P0035057	121 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0018758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0018758	-	82	63.636	MGP_CAROLIEiJ_G0016793	Rpl23a	65	61.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018758	-	88	55.140	ENSAMEG00000005208	-	65	55.140	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018758	-	63	57.895	ENSCAFG00000014107	-	51	58.228	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	64	52.564	ENSCAFG00000015308	-	53	52.564	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	88	49.057	ENSCAFG00000009706	-	70	49.057	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	79	45.263	ENSCAFG00000003391	-	61	45.263	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	71	55.814	ENSCAFG00000006700	-	58	55.814	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	59	52.113	ENSCAFG00000028825	-	54	52.113	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	83	44.954	ENSCAFG00000004716	-	74	44.954	Canis_familiaris
MGP_CAROLIEiJ_G0018758	-	70	52.941	ENSCGRG00001011003	-	54	52.941	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018758	-	70	52.941	ENSCGRG00000019420	-	54	52.941	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018758	-	81	45.918	ENSDNOG00000041286	-	62	45.918	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018758	-	64	46.154	ENSDNOG00000039276	-	50	46.154	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018758	-	100	90.909	MGP_SPRETEiJ_G0019641	-	100	90.909	Mus_spretus
MGP_CAROLIEiJ_G0018758	-	88	49.533	ENSOCUG00000021843	-	66	49.533	Oryctolagus_cuniculus