EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0018836 (Gene tree)
Gene ID
110307837
Gene Symbol
Smn1
Alias
SMN
Full Name
survival of motor neuron 1%2C telomeric
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
12780 bases
Position
chr13:93743015-93755794
Accession
110307837
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0035274SMNPF06003.127.5e-10211
MGP_CAROLIEiJ_P0035278SMNPF06003.125.4e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0035275-465--- (aa)--
MGP_CAROLIEiJ_T0035274-1223XM_021180077MGP_CAROLIEiJ_P0035274288 (aa)XP_021035736UPI000A317BBB
MGP_CAROLIEiJ_T0035277-224-MGP_CAROLIEiJ_P003527739 (aa)--
MGP_CAROLIEiJ_T0035276-421-MGP_CAROLIEiJ_P003527646 (aa)--
MGP_CAROLIEiJ_T0035280-547--- (aa)--
MGP_CAROLIEiJ_T0035279-605--- (aa)--
MGP_CAROLIEiJ_T0035278-485-MGP_CAROLIEiJ_P0035278161 (aa)--
MGP_CAROLIEiJ_T0035282-416--- (aa)--
MGP_CAROLIEiJ_T0035281-641--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0018836's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018836's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0018836Smn19683.154ENSG00000172062SMN19982.418Homo_sapiens
MGP_CAROLIEiJ_G0018836Smn19683.154ENSG00000205571SMN29982.418Homo_sapiens
MGP_CAROLIEiJ_G0018836Smn19354.945ENSAPOG00000011324smn19453.623Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018836Smn19783.630ENSAMEG00000003316-9682.474Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018836Smn15456.688ENSACIG00000007598smn18959.091Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018836Smn18951.938ENSACIG00000019772-9750.000Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018836Smn19353.506ENSAOCG00000024444smn19453.623Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018836Smn19353.875ENSAPEG00000016504smn19453.986Amphiprion_percula
MGP_CAROLIEiJ_G0018836Smn19053.788ENSATEG00000002182smn17954.580Anabas_testudineus
MGP_CAROLIEiJ_G0018836Smn18749.645ENSAPLG00000010912-9753.030Anas_platyrhynchos
MGP_CAROLIEiJ_G0018836Smn19953.716ENSACAG00000010017-9953.716Anolis_carolinensis
MGP_CAROLIEiJ_G0018836Smn19979.592ENSANAG00000032133-9978.571Aotus_nancymaae
MGP_CAROLIEiJ_G0018836Smn19349.640ENSACLG00000007308smn18852.239Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018836Smn19348.881ENSAMXG00000013884smn19549.817Astyanax_mexicanus
MGP_CAROLIEiJ_G0018836Smn19779.359ENSBTAG00000005743SMN210077.241Bos_taurus
MGP_CAROLIEiJ_G0018836Smn19681.071ENSCJAG00000016290-9978.912Callithrix_jacchus
MGP_CAROLIEiJ_G0018836Smn110083.849ENSCAFG00000007812SMN10083.505Canis_familiaris
MGP_CAROLIEiJ_G0018836Smn19984.083ENSCAFG00020019229-9383.737Canis_lupus_dingo
MGP_CAROLIEiJ_G0018836Smn19780.142ENSCHIG00000015559-10078.114Capra_hircus
MGP_CAROLIEiJ_G0018836Smn19983.045ENSTSYG00000012058-9982.699Carlito_syrichta
MGP_CAROLIEiJ_G0018836Smn17664.912ENSCAPG00000011021-10065.789Cavia_aperea
MGP_CAROLIEiJ_G0018836Smn19977.551ENSCPOG00000012328-9976.871Cavia_porcellus
MGP_CAROLIEiJ_G0018836Smn110077.627ENSCPOG00000036973-10076.949Cavia_porcellus
MGP_CAROLIEiJ_G0018836Smn19681.004ENSCCAG00000018127-9979.795Cebus_capucinus
MGP_CAROLIEiJ_G0018836Smn19682.796ENSCATG00000037002-9982.014Cercocebus_atys
MGP_CAROLIEiJ_G0018836Smn110075.920ENSCLAG00000000284-10075.920Chinchilla_lanigera
MGP_CAROLIEiJ_G0018836Smn19684.286ENSCSAG00000015688-9982.935Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018836Smn18671.825ENSCHOG00000007346-10071.825Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018836Smn19759.155ENSCPBG00000010968-9657.795Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018836Smn19576.786ENSCANG00000033324-9576.786Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018836Smn19683.929ENSCANG00000038242-9984.615Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018836Smn110072.569ENSCGRG00001016998-10072.569Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018836Smn110095.139ENSCGRG00001017959-10094.792Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018836Smn110095.139ENSCGRG00000007698Smn110094.792Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018836Smn19351.943ENSCSEG00000015227smn19751.064Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018836Smn19253.430ENSCVAG00000007498smn19453.191Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018836Smn19451.282ENSDARG00000018494smn19552.768Danio_rerio
MGP_CAROLIEiJ_G0018836Smn18778.322ENSDNOG00000007283-10079.012Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018836Smn18663.309ENSDNOG00000045949-9067.619Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018836Smn110076.531ENSDORG00000007082Smn19976.190Dipodomys_ordii
MGP_CAROLIEiJ_G0018836Smn17273.729ENSETEG00000001406-9367.539Echinops_telfairi
MGP_CAROLIEiJ_G0018836Smn19336.455ENSEBUG00000011902smn19239.286Eptatretus_burgeri
MGP_CAROLIEiJ_G0018836Smn19474.453ENSEASG00005018000-9774.453Equus_asinus_asinus
MGP_CAROLIEiJ_G0018836Smn110082.131ENSECAG00000015215-10082.131Equus_caballus
MGP_CAROLIEiJ_G0018836Smn18678.968ENSEEUG00000015777-10078.175Erinaceus_europaeus
MGP_CAROLIEiJ_G0018836Smn19255.197ENSELUG00000018067smn19452.174Esox_lucius
MGP_CAROLIEiJ_G0018836Smn110081.443ENSFCAG00000028292SMN10081.100Felis_catus
MGP_CAROLIEiJ_G0018836Smn19060.076ENSFALG00000012320-9157.634Ficedula_albicollis
MGP_CAROLIEiJ_G0018836Smn110076.589ENSFDAG00000017683-10076.589Fukomys_damarensis
MGP_CAROLIEiJ_G0018836Smn16154.494ENSFHEG00000018508smn19650.182Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018836Smn19647.038ENSGMOG00000017279smn19648.029Gadus_morhua
MGP_CAROLIEiJ_G0018836Smn19358.889ENSGALG00000002430SMN9557.407Gallus_gallus
MGP_CAROLIEiJ_G0018836Smn19352.190ENSGAFG00000009501smn19452.190Gambusia_affinis
MGP_CAROLIEiJ_G0018836Smn19352.347ENSGACG00000010584smn19150.903Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018836Smn19337.984ENSGAGG00000013639-5454.386Gopherus_agassizii
MGP_CAROLIEiJ_G0018836Smn19759.155ENSGAGG00000011374-9658.451Gopherus_agassizii
MGP_CAROLIEiJ_G0018836Smn16281.768ENSGGOG00000026704-9179.897Gorilla_gorilla
MGP_CAROLIEiJ_G0018836Smn19471.273ENSGGOG00000003872-10069.784Gorilla_gorilla
MGP_CAROLIEiJ_G0018836Smn19251.311ENSHBUG00000013987smn19454.135Haplochromis_burtoni
MGP_CAROLIEiJ_G0018836Smn19978.694ENSHGLG00000001018-9878.694Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018836Smn110075.170ENSHGLG00000001905-10075.170Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018836Smn19978.694ENSHGLG00100011252-9878.694Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018836Smn19675.532ENSHGLG00100018676-10075.532Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018836Smn19050.186ENSHCOG00000017136smn18750.388Hippocampus_comes
MGP_CAROLIEiJ_G0018836Smn19451.986ENSIPUG00000012580smn18650.000Ictalurus_punctatus
MGP_CAROLIEiJ_G0018836Smn19186.742ENSSTOG00000012288-10084.838Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018836Smn16664.662ENSJJAG00000014853-8964.925Jaculus_jaculus
MGP_CAROLIEiJ_G0018836Smn19453.237ENSKMAG00000007239smn19751.301Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018836Smn19353.137ENSLBEG00000022550smn19454.815Labrus_bergylta
MGP_CAROLIEiJ_G0018836Smn19336.957ENSLACG00000009808-9535.495Latimeria_chalumnae
MGP_CAROLIEiJ_G0018836Smn19253.903ENSLOCG00000011339smn19452.788Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018836Smn110079.661ENSLAFG00000003425-9679.661Loxodonta_africana
MGP_CAROLIEiJ_G0018836Smn19685.000ENSMFAG00000031523SMN19984.615Macaca_fascicularis
MGP_CAROLIEiJ_G0018836Smn19678.136ENSMFAG00000008812-9977.055Macaca_fascicularis
MGP_CAROLIEiJ_G0018836Smn19685.000ENSMMUG00000020214SMN19984.615Macaca_mulatta
MGP_CAROLIEiJ_G0018836Smn19677.419ENSMMUG00000030594-9976.370Macaca_mulatta
MGP_CAROLIEiJ_G0018836Smn19684.643ENSMNEG00000035094-9984.615Macaca_nemestrina
MGP_CAROLIEiJ_G0018836Smn18667.376ENSMNEG00000036423-8668.326Macaca_nemestrina
MGP_CAROLIEiJ_G0018836Smn19683.871ENSMLEG00000041902-9983.094Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018836Smn19252.574ENSMAMG00000011034smn19451.625Mastacembelus_armatus
MGP_CAROLIEiJ_G0018836Smn19250.000ENSMZEG00005013634smn19452.174Maylandia_zebra
MGP_CAROLIEiJ_G0018836Smn18748.936ENSMGAG00000008889-9552.284Meleagris_gallopavo
MGP_CAROLIEiJ_G0018836Smn110092.014ENSMAUG00000010262Smn110093.403Mesocricetus_auratus
MGP_CAROLIEiJ_G0018836Smn19278.947ENSMICG00000034708-9985.227Microcebus_murinus
MGP_CAROLIEiJ_G0018836Smn110092.014ENSMOCG00000017833Smn110091.667Microtus_ochrogaster
MGP_CAROLIEiJ_G0018836Smn19248.120ENSMMOG00000005504smn19651.880Mola_mola
MGP_CAROLIEiJ_G0018836Smn110064.505ENSMODG00000001436-9963.481Monodelphis_domestica
MGP_CAROLIEiJ_G0018836Smn19251.838ENSMALG00000008025smn19451.625Monopterus_albus
MGP_CAROLIEiJ_G0018836Smn110098.758ENSMUSG00000021645Smn110098.758Mus_musculus
MGP_CAROLIEiJ_G0018836Smn110093.403MGP_PahariEiJ_G0015911Smn110094.444Mus_pahari
MGP_CAROLIEiJ_G0018836Smn110098.611MGP_SPRETEiJ_G0019718Smn110098.611Mus_spretus
MGP_CAROLIEiJ_G0018836Smn19584.838ENSMPUG00000014470-9884.477Mustela_putorius_furo
MGP_CAROLIEiJ_G0018836Smn19782.639ENSMLUG00000010603-9681.605Myotis_lucifugus
MGP_CAROLIEiJ_G0018836Smn110085.517ENSNGAG00000019833Smn110085.172Nannospalax_galili
MGP_CAROLIEiJ_G0018836Smn15362.987ENSNBRG00000023000smn19452.536Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018836Smn19981.507ENSNLEG00000004454-9982.418Nomascus_leucogenys
MGP_CAROLIEiJ_G0018836Smn18758.333ENSMEUG00000011393-9960.088Notamacropus_eugenii
MGP_CAROLIEiJ_G0018836Smn18677.075ENSOPRG00000002015-10077.866Ochotona_princeps
MGP_CAROLIEiJ_G0018836Smn19578.623ENSODEG00000015976-9778.261Octodon_degus
MGP_CAROLIEiJ_G0018836Smn15462.179ENSONIG00000011799smn19552.158Oreochromis_niloticus
MGP_CAROLIEiJ_G0018836Smn19462.319ENSOANG00000001626-9663.043Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0018836Smn19974.576ENSOCUG00000026649-9977.288Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018836Smn110079.110ENSOCUG00000017097-9979.110Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018836Smn19973.038ENSOCUG00000025183-9972.355Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018836Smn19354.074ENSORLG00000010552smn19454.074Oryzias_latipes
MGP_CAROLIEiJ_G0018836Smn19352.416ENSORLG00020007936smn19351.504Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018836Smn19350.929ENSORLG00015022425smn19454.074Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018836Smn19353.358ENSOMEG00000007824smn19454.815Oryzias_melastigma
MGP_CAROLIEiJ_G0018836Smn19174.444ENSOGAG00000031414-10071.626Otolemur_garnettii
MGP_CAROLIEiJ_G0018836Smn19578.261ENSOARG00000005425-10076.812Ovis_aries
MGP_CAROLIEiJ_G0018836Smn19683.513ENSPPAG00000036640-9982.734Pan_paniscus
MGP_CAROLIEiJ_G0018836Smn110081.787ENSPPRG00000005575-10081.443Panthera_pardus
MGP_CAROLIEiJ_G0018836Smn110081.787ENSPTIG00000007745-10081.787Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018836Smn19682.270ENSPTRG00000016955-9982.418Pan_troglodytes
MGP_CAROLIEiJ_G0018836Smn19578.623ENSPANG00000000253-9877.509Papio_anubis
MGP_CAROLIEiJ_G0018836Smn19983.618ENSPANG00000013601-9984.615Papio_anubis
MGP_CAROLIEiJ_G0018836Smn19249.064ENSPKIG00000011096smn19450.376Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018836Smn19256.115ENSPSIG00000014787-8753.986Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018836Smn19445.205ENSPMGG00000012285smn19449.237Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0018836Smn19740.283ENSPMAG00000005004smn19640.210Petromyzon_marinus
MGP_CAROLIEiJ_G0018836Smn19866.202ENSPCIG00000025764-9965.157Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018836Smn19353.480ENSPFOG00000007786smn19454.074Poecilia_formosa
MGP_CAROLIEiJ_G0018836Smn19353.846ENSPLAG00000012071smn19454.444Poecilia_latipinna
MGP_CAROLIEiJ_G0018836Smn19353.480ENSPMEG00000017085smn19454.074Poecilia_mexicana
MGP_CAROLIEiJ_G0018836Smn19353.285ENSPREG00000005824smn19453.285Poecilia_reticulata
MGP_CAROLIEiJ_G0018836Smn18653.600ENSPPYG00000019189-9954.400Pongo_abelii
MGP_CAROLIEiJ_G0018836Smn19281.648ENSPPYG00000015533-9781.648Pongo_abelii
MGP_CAROLIEiJ_G0018836Smn19278.309ENSPCAG00000004187-10076.838Procavia_capensis
MGP_CAROLIEiJ_G0018836Smn18773.973ENSPCOG00000022307-10062.977Propithecus_coquereli
MGP_CAROLIEiJ_G0018836Smn19784.698ENSPVAG00000005977-10082.653Pteropus_vampyrus
MGP_CAROLIEiJ_G0018836Smn15362.987ENSPNYG00000014148smn19452.536Pundamilia_nyererei
MGP_CAROLIEiJ_G0018836Smn19451.264ENSPNAG00000014007smn18449.648Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018836Smn110094.810ENSRNOG00000018067Smn110094.464Rattus_norvegicus
MGP_CAROLIEiJ_G0018836Smn19568.929ENSRBIG00000036775-9269.963Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018836Smn19684.286ENSRBIG00000037052-9984.615Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018836Smn19968.259ENSRROG00000031088-9769.231Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018836Smn19684.286ENSRROG00000039399-9984.615Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018836Smn19679.211ENSSBOG00000011665-9978.082Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018836Smn18476.000ENSSBOG00000020112-8775.299Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018836Smn110065.529ENSSHAG00000001499-10063.177Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018836Smn19352.434ENSSFOG00015015507smn19452.364Scleropages_formosus
MGP_CAROLIEiJ_G0018836Smn19350.183ENSSMAG00000007922smn19451.986Scophthalmus_maximus
MGP_CAROLIEiJ_G0018836Smn19351.661ENSSDUG00000018533smn19451.986Seriola_dumerili
MGP_CAROLIEiJ_G0018836Smn19352.030ENSSLDG00000021135smn19452.347Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018836Smn19660.714ENSSPUG00000000373-9559.928Sphenodon_punctatus
MGP_CAROLIEiJ_G0018836Smn19352.963ENSSPAG00000004345smn19452.788Stegastes_partitus
MGP_CAROLIEiJ_G0018836Smn19760.714ENSSSCG00000029127-9762.153Sus_scrofa
MGP_CAROLIEiJ_G0018836Smn19781.495ENSSSCG00000016970-10081.633Sus_scrofa
MGP_CAROLIEiJ_G0018836Smn17756.800ENSSSCG00000033865-9555.399Sus_scrofa
MGP_CAROLIEiJ_G0018836Smn19458.633ENSTGUG00000001548-10058.633Taeniopygia_guttata
MGP_CAROLIEiJ_G0018836Smn15553.939ENSTRUG00000000736smn9548.540Takifugu_rubripes
MGP_CAROLIEiJ_G0018836Smn19350.000ENSTNIG00000009892smn19549.270Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0018836Smn16682.292ENSTBEG00000002399-9382.292Tupaia_belangeri
MGP_CAROLIEiJ_G0018836Smn19779.359ENSTTRG00000005080-10078.716Tursiops_truncatus
MGP_CAROLIEiJ_G0018836Smn16284.066ENSUAMG00000024947-7082.812Ursus_americanus
MGP_CAROLIEiJ_G0018836Smn19784.342ENSUMAG00000007842-7483.162Ursus_maritimus
MGP_CAROLIEiJ_G0018836Smn19173.585ENSVPAG00000009887-10071.685Vicugna_pacos
MGP_CAROLIEiJ_G0018836Smn110083.849ENSVVUG00000006934-10083.505Vulpes_vulpes
MGP_CAROLIEiJ_G0018836Smn19652.837ENSXETG00000018189smn29653.659Xenopus_tropicalis
MGP_CAROLIEiJ_G0018836Smn19138.710ENSXETG00000004912-7962.903Xenopus_tropicalis
MGP_CAROLIEiJ_G0018836Smn19351.971ENSXMAG00000001521smn19550.896Xiphophorus_maculatus

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