EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018855 (Gene tree)
Gene ID: 110308151
Gene Symbol: Srek1
Alias: AL118220|SRrp508|SRrp86|Sfrs12
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 21905 bases
Position: chr13:97323671-97345575
Accession: 110308151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0035354	RRM_1	PF00076.22	5.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0035354	-	3992	-	MGP_CAROLIEiJ_P0035354	494 (aa)	XP_021036188	UPI000A314B18

Gene Model

Click here to download MGP_CAROLIEiJ_G0018855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018855	Srek1	73	96.694	ENSCSAG00000015908	-	77	93.802	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018855	Srek1	100	97.976	ENSMUSG00000032621	Srek1	100	99.363	Mus_musculus
MGP_CAROLIEiJ_G0018855	Srek1	100	98.583	MGP_SPRETEiJ_G0019734	Srek1	100	98.583	Mus_spretus
MGP_CAROLIEiJ_G0018855	Srek1	67	81.081	ENSOGAG00000030859	-	99	79.819	Otolemur_garnettii
MGP_CAROLIEiJ_G0018855	Srek1	62	90.871	ENSPSIG00000012187	-	90	89.212	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018855	Srek1	100	95.344	ENSRNOG00000032735	Srek1	81	95.344	Rattus_norvegicus