EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0018896 (Gene tree)
Gene ID: 110307553
Gene Symbol: Mtrex
Alias: 2610528A15Rik|Skiv2l2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 56527 bases
Position: chr13:106139448-106195974
Accession: 110307553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0035495	rRNA_proc-arch	PF13234.6	6.5e-87	1	1
MGP_CAROLIEiJ_P0035495	DEAD	PF00270.29	8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0035495	-	3332	XM_021179787	MGP_CAROLIEiJ_P0035495	1040 (aa)	XP_021035446	UPI000A3191A1

Gene Model

Click here to download MGP_CAROLIEiJ_G0018896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0018896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0018896	Mtrex	88	37.318	MGP_CAROLIEiJ_G0021477	Skiv2l	76	37.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	ENSG00000039123	MTREX	100	97.217	Homo_sapiens
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.174	ENSAPOG00000007814	mtrex	100	83.174	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.932	ENSAMEG00000013856	MTREX	100	96.932	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0018896	Mtrex	92	87.565	ENSACIG00000015117	mtrex	96	87.565	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.270	ENSAOCG00000011884	mtrex	100	83.270	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.174	ENSAPEG00000019384	mtrex	100	83.174	Amphiprion_percula
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.652	ENSATEG00000015117	mtrex	100	83.652	Anabas_testudineus
MGP_CAROLIEiJ_G0018896	Mtrex	95	92.649	ENSAPLG00000009694	MTREX	100	92.649	Anas_platyrhynchos
MGP_CAROLIEiJ_G0018896	Mtrex	100	91.092	ENSACAG00000015200	MTREX	96	91.250	Anolis_carolinensis
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSANAG00000023095	MTREX	100	97.121	Aotus_nancymaae
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.600	ENSACLG00000001921	mtrex	100	82.600	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0018896	Mtrex	97	81.299	ENSAMXG00000018751	mtrex	99	83.501	Astyanax_mexicanus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.115	ENSBTAG00000010518	MTREX	100	97.115	Bos_taurus
MGP_CAROLIEiJ_G0018896	Mtrex	91	53.417	WBGene00012342	mtr-4	96	52.328	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.992	ENSCJAG00000001773	MTREX	100	95.992	Callithrix_jacchus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSCAFG00000006818	MTREX	100	96.929	Canis_familiaris
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSCAFG00020024352	MTREX	100	96.929	Canis_lupus_dingo
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSCHIG00000024413	MTREX	100	96.929	Capra_hircus
MGP_CAROLIEiJ_G0018896	Mtrex	93	96.948	ENSTSYG00000007389	MTREX	100	96.948	Carlito_syrichta
MGP_CAROLIEiJ_G0018896	Mtrex	96	72.244	ENSCAPG00000008696	MTREX	100	72.244	Cavia_aperea
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.737	ENSCPOG00000009797	MTREX	100	96.737	Cavia_porcellus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSCCAG00000014177	MTREX	100	97.121	Cebus_capucinus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.025	ENSCATG00000042153	MTREX	100	97.025	Cercocebus_atys
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.449	ENSCLAG00000006622	MTREX	100	96.449	Chinchilla_lanigera
MGP_CAROLIEiJ_G0018896	Mtrex	100	92.440	ENSCSAG00000016445	MTREX	100	92.536	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0018896	Mtrex	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0018896	Mtrex	100	91.931	ENSCPBG00000026551	MTREX	94	92.411	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0018896	Mtrex	99	66.348	ENSCING00000003239	-	99	66.188	Ciona_intestinalis
MGP_CAROLIEiJ_G0018896	Mtrex	99	64.795	ENSCSAVG00000009304	-	100	69.677	Ciona_savignyi
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSCANG00000035770	MTREX	100	97.121	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.983	ENSCGRG00001024680	Mtrex	100	97.983	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.983	ENSCGRG00000000307	Mtrex	100	97.983	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.757	ENSCSEG00000018621	mtrex	98	81.757	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0018896	Mtrex	100	84.019	ENSCVAG00000004556	mtrex	100	84.019	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	84.689	ENSDARG00000013457	mtrex	100	84.402	Danio_rerio
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.507	ENSDNOG00000015375	MTREX	100	95.507	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.545	ENSDORG00000006782	Mtrex	100	96.545	Dipodomys_ordii
MGP_CAROLIEiJ_G0018896	Mtrex	92	66.597	FBgn0001986	Mtr4	93	65.261	Drosophila_melanogaster
MGP_CAROLIEiJ_G0018896	Mtrex	90	80.000	ENSETEG00000000727	MTREX	90	80.000	Echinops_telfairi
MGP_CAROLIEiJ_G0018896	Mtrex	99	74.880	ENSEBUG00000012869	mtrex	99	74.450	Eptatretus_burgeri
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.545	ENSEASG00005013270	MTREX	100	96.545	Equus_asinus_asinus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.641	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
MGP_CAROLIEiJ_G0018896	Mtrex	98	87.707	ENSEEUG00000000527	MTREX	100	87.707	Erinaceus_europaeus
MGP_CAROLIEiJ_G0018896	Mtrex	98	84.302	ENSELUG00000004898	mtrex	100	89.286	Esox_lucius
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSFCAG00000010575	MTREX	100	96.929	Felis_catus
MGP_CAROLIEiJ_G0018896	Mtrex	100	90.481	ENSFALG00000010850	MTREX	100	90.481	Ficedula_albicollis
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.346	ENSFDAG00000011199	MTREX	100	96.346	Fukomys_damarensis
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.238	ENSFHEG00000023014	mtrex	100	82.600	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0018896	Mtrex	100	79.254	ENSGMOG00000014702	mtrex	100	79.541	Gadus_morhua
MGP_CAROLIEiJ_G0018896	Mtrex	100	91.171	ENSGALG00000014709	MTREX	86	91.075	Gallus_gallus
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.939	ENSGAFG00000012425	mtrex	100	83.939	Gambusia_affinis
MGP_CAROLIEiJ_G0018896	Mtrex	100	79.218	ENSGACG00000016260	mtrex	96	85.000	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	92.027	ENSGAGG00000020036	MTREX	100	92.027	Gopherus_agassizii
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.313	ENSGGOG00000001867	MTREX	100	97.313	Gorilla_gorilla
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.600	ENSHBUG00000006229	mtrex	100	82.600	Haplochromis_burtoni
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.635	ENSHGLG00000019445	SKIV2L2	100	96.635	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.635	ENSHGLG00100011833	SKIV2L2	100	96.635	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0018896	Mtrex	91	84.420	ENSHCOG00000019995	mtrex	100	84.420	Hippocampus_comes
MGP_CAROLIEiJ_G0018896	Mtrex	100	84.483	ENSIPUG00000024348	skiv2l2	100	84.483	Ictalurus_punctatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSSTOG00000010802	MTREX	100	96.929	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	90.962	ENSJJAG00000020975	Mtrex	100	90.962	Jaculus_jaculus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.679	ENSKMAG00000012642	mtrex	100	82.679	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.078	ENSLBEG00000019367	mtrex	99	85.714	Labrus_bergylta
MGP_CAROLIEiJ_G0018896	Mtrex	100	88.184	ENSLACG00000009075	MTREX	100	87.751	Latimeria_chalumnae
MGP_CAROLIEiJ_G0018896	Mtrex	100	87.140	ENSLOCG00000010186	mtrex	100	86.948	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0018896	Mtrex	99	94.242	ENSLAFG00000010497	MTREX	100	94.338	Loxodonta_africana
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.025	ENSMFAG00000031610	MTREX	100	97.025	Macaca_fascicularis
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.073	ENSMMUG00000010379	MTREX	100	96.073	Macaca_mulatta
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.025	ENSMNEG00000032746	MTREX	100	97.025	Macaca_nemestrina
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.025	ENSMLEG00000041051	MTREX	100	97.025	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0018896	Mtrex	94	86.904	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.600	ENSMZEG00005000414	mtrex	100	82.600	Maylandia_zebra
MGP_CAROLIEiJ_G0018896	Mtrex	95	67.846	ENSMGAG00000003980	MTREX	100	67.846	Meleagris_gallopavo
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.887	ENSMAUG00000010727	Mtrex	100	97.887	Mesocricetus_auratus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.505	ENSMICG00000012779	MTREX	100	97.505	Microcebus_murinus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.985	ENSMOCG00000019886	Mtrex	100	97.985	Microtus_ochrogaster
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.740	ENSMMOG00000002476	mtrex	100	81.740	Mola_mola
MGP_CAROLIEiJ_G0018896	Mtrex	100	93.173	ENSMODG00000019494	MTREX	100	93.462	Monodelphis_domestica
MGP_CAROLIEiJ_G0018896	Mtrex	92	82.088	ENSMALG00000002917	mtrex	99	82.088	Monopterus_albus
MGP_CAROLIEiJ_G0018896	Mtrex	100	99.423	ENSMUSG00000016018	Mtrex	100	99.423	Mus_musculus
MGP_CAROLIEiJ_G0018896	Mtrex	100	98.846	MGP_PahariEiJ_G0015967	Mtrex	100	98.846	Mus_pahari
MGP_CAROLIEiJ_G0018896	Mtrex	100	99.423	MGP_SPRETEiJ_G0019775	Mtrex	100	99.423	Mus_spretus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSMPUG00000007619	MTREX	100	97.121	Mustela_putorius_furo
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.973	ENSMLUG00000001152	MTREX	100	95.973	Myotis_lucifugus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.793	ENSNGAG00000011938	Mtrex	100	97.793	Nannospalax_galili
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.696	ENSNBRG00000011293	mtrex	100	82.696	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0018896	Mtrex	100	93.008	ENSNLEG00000001494	MTREX	100	93.103	Nomascus_leucogenys
MGP_CAROLIEiJ_G0018896	Mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.019	ENSOPRG00000008009	MTREX	100	82.019	Ochotona_princeps
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.873	ENSODEG00000017234	MTREX	100	95.969	Octodon_degus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.505	ENSONIG00000007587	mtrex	100	82.505	Oreochromis_niloticus
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.404	ENSOCUG00000004463	MTREX	100	97.404	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.364	ENSORLG00000005443	mtrex	100	82.235	Oryzias_latipes
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.269	ENSORLG00020006329	mtrex	100	82.269	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.173	ENSORLG00015012924	mtrex	100	82.173	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.506	ENSOMEG00000008825	mtrex	100	81.679	Oryzias_melastigma
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSOGAG00000002886	MTREX	100	97.121	Otolemur_garnettii
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.651	ENSOARG00000007764	MTREX	100	96.651	Ovis_aries
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	ENSPPAG00000039291	MTREX	100	97.217	Pan_paniscus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSPPRG00000019701	MTREX	100	96.929	Panthera_pardus
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.393	ENSPTIG00000009313	MTREX	100	95.393	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	ENSPTRG00000016878	MTREX	100	97.217	Pan_troglodytes
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSPANG00000009697	MTREX	100	96.929	Papio_anubis
MGP_CAROLIEiJ_G0018896	Mtrex	100	86.699	ENSPKIG00000020833	mtrex	100	86.699	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0018896	Mtrex	100	91.739	ENSPSIG00000012150	MTREX	100	92.315	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.471	ENSPMGG00000002582	mtrex	100	81.566	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0018896	Mtrex	95	65.528	ENSPMAG00000009668	mtrex	100	65.292	Petromyzon_marinus
MGP_CAROLIEiJ_G0018896	Mtrex	91	96.515	ENSPCIG00000024730	MTREX	100	96.515	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0018896	Mtrex	75	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.556	ENSPLAG00000021311	mtrex	100	83.923	Poecilia_latipinna
MGP_CAROLIEiJ_G0018896	Mtrex	92	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.365	ENSPREG00000003089	mtrex	100	83.732	Poecilia_reticulata
MGP_CAROLIEiJ_G0018896	Mtrex	98	97.268	ENSPPYG00000015469	MTREX	98	97.268	Pongo_abelii
MGP_CAROLIEiJ_G0018896	Mtrex	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
MGP_CAROLIEiJ_G0018896	Mtrex	99	91.675	ENSPCOG00000018092	MTREX	100	91.675	Propithecus_coquereli
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSPVAG00000002445	MTREX	100	97.121	Pteropus_vampyrus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.505	ENSPNYG00000006164	mtrex	100	82.505	Pundamilia_nyererei
MGP_CAROLIEiJ_G0018896	Mtrex	100	85.455	ENSPNAG00000008794	mtrex	100	85.455	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0018896	Mtrex	99	98.445	ENSRNOG00000010125	Mtrex	97	98.445	Rattus_norvegicus
MGP_CAROLIEiJ_G0018896	Mtrex	100	95.489	ENSRBIG00000034930	MTREX	100	95.489	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	ENSRROG00000039895	MTREX	100	97.217	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0018896	Mtrex	90	55.975	YJL050W	MTR4	89	55.975	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSSBOG00000026693	MTREX	100	96.929	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0018896	Mtrex	96	95.085	ENSSHAG00000004600	MTREX	100	95.085	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0018896	Mtrex	100	87.452	ENSSFOG00015014355	skiv2l2	100	87.452	Scleropages_formosus
MGP_CAROLIEiJ_G0018896	Mtrex	100	82.887	ENSSMAG00000007572	mtrex	100	82.887	Scophthalmus_maximus
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.397	ENSSDUG00000023789	mtrex	100	83.461	Seriola_dumerili
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.174	ENSSLDG00000006301	mtrex	100	83.174	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0018896	Mtrex	100	93.666	ENSSARG00000008387	MTREX	100	93.666	Sorex_araneus
MGP_CAROLIEiJ_G0018896	Mtrex	100	79.635	ENSSPUG00000007071	MTREX	100	79.635	Sphenodon_punctatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.071	ENSSPAG00000011319	mtrex	100	81.453	Stegastes_partitus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.929	ENSSSCG00000016911	MTREX	100	96.929	Sus_scrofa
MGP_CAROLIEiJ_G0018896	Mtrex	100	89.914	ENSTGUG00000002480	MTREX	100	89.712	Taeniopygia_guttata
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.078	ENSTRUG00000014571	mtrex	100	83.078	Takifugu_rubripes
MGP_CAROLIEiJ_G0018896	Mtrex	100	81.190	ENSTBEG00000007769	MTREX	100	81.478	Tupaia_belangeri
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.827	ENSTTRG00000008678	MTREX	100	96.827	Tursiops_truncatus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.833	ENSUAMG00000023061	MTREX	100	96.833	Ursus_americanus
MGP_CAROLIEiJ_G0018896	Mtrex	100	96.264	ENSUMAG00000009373	MTREX	99	98.966	Ursus_maritimus
MGP_CAROLIEiJ_G0018896	Mtrex	100	85.893	ENSVPAG00000011174	MTREX	100	85.797	Vicugna_pacos
MGP_CAROLIEiJ_G0018896	Mtrex	100	97.121	ENSVVUG00000021337	MTREX	100	97.121	Vulpes_vulpes
MGP_CAROLIEiJ_G0018896	Mtrex	100	88.410	ENSXETG00000032798	MTREX	100	88.410	Xenopus_tropicalis
MGP_CAROLIEiJ_G0018896	Mtrex	100	83.636	ENSXMAG00000004799	mtrex	100	83.636	Xiphophorus_maculatus