EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019163 (Gene tree)
Gene ID: 110309070
Gene Symbol: Wdhd1
Alias: AND-1|D630024B06Rik
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 35320 bases
Position: chr14:39097985-39133304
Accession: 110309070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0036355	eIF2A	PF08662.11	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0036356	-	2783	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0036355	-	2727	-	MGP_CAROLIEiJ_P0036355	641 (aa)	-	-
MGP_CAROLIEiJ_T0036354	-	4295	XM_021181464	MGP_CAROLIEiJ_P0036354	1117 (aa)	XP_021037123	-
MGP_CAROLIEiJ_T0036353	-	4109	-	MGP_CAROLIEiJ_P0036353	1081 (aa)	-	-
MGP_CAROLIEiJ_T0036352	-	4271	XM_021181464	MGP_CAROLIEiJ_P0036352	1118 (aa)	XP_021037123	UPI000A31B3DD

Gene Model

Click here to download MGP_CAROLIEiJ_G0019163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSG00000198554	WDHD1	100	90.476	Homo_sapiens
MGP_CAROLIEiJ_G0019163	Wdhd1	97	60.476	ENSAPOG00000001560	wdhd1	59	60.535	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.748	ENSAMEG00000014356	WDHD1	63	84.748	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019163	Wdhd1	98	62.598	ENSACIG00000021530	wdhd1	61	62.598	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.285	ENSAOCG00000018123	wdhd1	56	61.285	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.215	ENSAPEG00000000157	wdhd1	57	61.215	Amphiprion_percula
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.844	ENSATEG00000021986	wdhd1	59	58.333	Anabas_testudineus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	70.236	ENSACAG00000016303	WDHD1	56	70.236	Anolis_carolinensis
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.718	ENSACLG00000009036	wdhd1	56	61.094	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019163	Wdhd1	98	57.746	ENSAMXG00000043712	wdhd1	98	61.538	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.094	ENSBTAG00000019120	WDHD1	56	84.094	Bos_taurus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.063	ENSCJAG00000018208	WDHD1	57	85.063	Callithrix_jacchus
MGP_CAROLIEiJ_G0019163	Wdhd1	79	83.431	ENSCAFG00000014989	WDHD1	51	83.431	Canis_familiaris
MGP_CAROLIEiJ_G0019163	Wdhd1	99	83.728	ENSCHIG00000017956	WDHD1	57	83.728	Capra_hircus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	83.359	ENSTSYG00000000266	WDHD1	57	83.359	Carlito_syrichta
MGP_CAROLIEiJ_G0019163	Wdhd1	85	87.975	ENSCCAG00000018389	WDHD1	92	87.975	Cebus_capucinus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSCATG00000035221	WDHD1	57	85.512	Cercocebus_atys
MGP_CAROLIEiJ_G0019163	Wdhd1	98	80.507	ENSCLAG00000013863	-	99	80.190	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019163	Wdhd1	94	84.452	ENSCSAG00000014757	WDHD1	55	84.262	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	74.686	ENSCPBG00000020071	WDHD1	56	74.882	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.063	ENSCANG00000037721	WDHD1	61	84.882	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.538	ENSDARG00000015998	wdhd1	97	67.797	Danio_rerio
MGP_CAROLIEiJ_G0019163	Wdhd1	99	82.866	ENSDNOG00000006661	WDHD1	57	82.866	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019163	Wdhd1	99	85.469	ENSECAG00000015412	WDHD1	54	86.006	Equus_caballus
MGP_CAROLIEiJ_G0019163	Wdhd1	99	60.592	ENSELUG00000015575	wdhd1	60	61.371	Esox_lucius
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.849	ENSFCAG00000023408	-	56	85.849	Felis_catus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	71.541	ENSGALG00000012199	WDHD1	56	72.642	Gallus_gallus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	48.545	ENSGACG00000017321	wdhd1	56	51.318	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	73.858	ENSGAGG00000010665	-	73	74.488	Gopherus_agassizii
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.535	ENSGGOG00000007744	WDHD1	57	85.535	Gorilla_gorilla
MGP_CAROLIEiJ_G0019163	Wdhd1	98	82.035	ENSHGLG00000015105	WDHD1	56	81.717	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019163	Wdhd1	98	82.035	ENSHGLG00100001967	WDHD1	56	81.717	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019163	Wdhd1	98	60.530	ENSHCOG00000007286	wdhd1	60	60.876	Hippocampus_comes
MGP_CAROLIEiJ_G0019163	Wdhd1	98	86.169	ENSSTOG00000020300	WDHD1	56	86.010	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	74.250	ENSJJAG00000001164	Wdhd1	56	74.250	Jaculus_jaculus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.624	ENSLBEG00000024847	wdhd1	56	60.094	Labrus_bergylta
MGP_CAROLIEiJ_G0019163	Wdhd1	98	63.707	ENSLACG00000019053	WDHD1	56	64.019	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019163	Wdhd1	99	61.610	ENSLOCG00000012086	wdhd1	57	62.539	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.400	ENSLAFG00000005385	WDHD1	56	85.400	Loxodonta_africana
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSMFAG00000032915	WDHD1	57	85.512	Macaca_fascicularis
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSMMUG00000000302	WDHD1	56	85.512	Macaca_mulatta
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSMNEG00000032489	WDHD1	57	85.512	Macaca_nemestrina
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.692	ENSMLEG00000035661	WDHD1	57	85.512	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019163	Wdhd1	99	61.215	ENSMAMG00000016742	wdhd1	57	61.215	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.875	ENSMZEG00005015228	wdhd1	56	61.250	Maylandia_zebra
MGP_CAROLIEiJ_G0019163	Wdhd1	98	70.063	ENSMGAG00000013676	WDHD1	56	71.049	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.724	ENSMICG00000016239	WDHD1	56	84.724	Microcebus_murinus
MGP_CAROLIEiJ_G0019163	Wdhd1	99	61.705	ENSMMOG00000007869	wdhd1	58	61.310	Mola_mola
MGP_CAROLIEiJ_G0019163	Wdhd1	98	74.451	ENSMODG00000011703	WDHD1	57	75.392	Monodelphis_domestica
MGP_CAROLIEiJ_G0019163	Wdhd1	100	97.192	MGP_PahariEiJ_G0030180	Wdhd1	100	97.192	Mus_pahari
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.434	ENSMPUG00000005542	WDHD1	56	84.434	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019163	Wdhd1	99	83.255	ENSMLUG00000010353	WDHD1	57	83.438	Myotis_lucifugus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.224	ENSNBRG00000010071	wdhd1	57	61.417	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.220	ENSNLEG00000012760	WDHD1	58	85.220	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.381	ENSONIG00000007084	wdhd1	57	61.538	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.354	ENSOCUG00000004987	WDHD1	56	85.354	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019163	Wdhd1	99	58.567	ENSORLG00000019721	wdhd1	61	59.624	Oryzias_latipes
MGP_CAROLIEiJ_G0019163	Wdhd1	99	58.594	ENSORLG00020007040	wdhd1	59	59.062	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019163	Wdhd1	99	58.906	ENSORLG00015008848	wdhd1	57	59.813	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019163	Wdhd1	98	82.075	ENSOGAG00000003465	WDHD1	56	82.075	Otolemur_garnettii
MGP_CAROLIEiJ_G0019163	Wdhd1	98	83.780	ENSOARG00000021081	WDHD1	56	83.780	Ovis_aries
MGP_CAROLIEiJ_G0019163	Wdhd1	98	83.307	ENSPPAG00000035486	WDHD1	56	83.307	Pan_paniscus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.220	ENSPPRG00000007679	WDHD1	56	85.220	Panthera_pardus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.535	ENSPTIG00000013608	WDHD1	56	85.535	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.849	ENSPTRG00000006366	WDHD1	57	85.849	Pan_troglodytes
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.535	ENSPANG00000017506	WDHD1	57	85.354	Papio_anubis
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.041	ENSPKIG00000004863	wdhd1	57	60.630	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019163	Wdhd1	98	73.228	ENSPSIG00000011635	WDHD1	62	73.428	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.220	ENSPPYG00000005834	WDHD1	56	85.220	Pongo_abelii
MGP_CAROLIEiJ_G0019163	Wdhd1	91	80.442	ENSPVAG00000016064	WDHD1	52	80.815	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.718	ENSPNYG00000019115	wdhd1	94	68.227	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019163	Wdhd1	98	61.838	ENSPNAG00000013823	wdhd1	56	62.305	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019163	Wdhd1	98	92.369	ENSRNOG00000011167	Wdhd1	56	92.369	Rattus_norvegicus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.220	ENSRROG00000006993	WDHD1	57	85.039	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019163	Wdhd1	98	78.459	ENSSBOG00000034847	WDHD1	55	78.459	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019163	Wdhd1	94	73.322	ENSSHAG00000013551	WDHD1	55	74.141	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019163	Wdhd1	99	61.987	ENSSFOG00015009950	wdhd1	60	61.346	Scleropages_formosus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.161	ENSSMAG00000007346	wdhd1	56	59.692	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	54.814	ENSSDUG00000016996	wdhd1	57	55.677	Seriola_dumerili
MGP_CAROLIEiJ_G0019163	Wdhd1	98	60.601	ENSSLDG00000021689	wdhd1	98	64.241	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.591	ENSSSCG00000005052	WDHD1	56	84.591	Sus_scrofa
MGP_CAROLIEiJ_G0019163	Wdhd1	98	59.528	ENSTNIG00000018803	wdhd1	57	59.627	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019163	Wdhd1	99	85.156	ENSTTRG00000003314	WDHD1	59	85.156	Tursiops_truncatus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.119	ENSUAMG00000015360	-	88	84.119	Ursus_americanus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.277	ENSUMAG00000015946	WDHD1	59	84.277	Ursus_maritimus
MGP_CAROLIEiJ_G0019163	Wdhd1	98	85.535	ENSVPAG00000008394	WDHD1	56	85.535	Vicugna_pacos
MGP_CAROLIEiJ_G0019163	Wdhd1	98	84.591	ENSVVUG00000029613	WDHD1	60	84.591	Vulpes_vulpes
MGP_CAROLIEiJ_G0019163	Wdhd1	98	64.992	ENSXETG00000012210	wdhd1	56	65.300	Xenopus_tropicalis