EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0019209 (Gene tree)
Gene ID
110309328
Gene Symbol
Apex1
Alias
HAP1|Ref-1
Full Name
apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
2179 bases
Position
chr14:42871541-42873719
Accession
110309328
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0036480Exo_endo_phosPF03372.232.3e-2111
MGP_CAROLIEiJ_P0036483Exo_endo_phosPF03372.234.5e-2011
MGP_CAROLIEiJ_P0036481Exo_endo_phosPF03372.231.5e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0036483-1021-MGP_CAROLIEiJ_P0036483288 (aa)--
MGP_CAROLIEiJ_T0036482-439-MGP_CAROLIEiJ_P003648249 (aa)--
MGP_CAROLIEiJ_T0036481-655-MGP_CAROLIEiJ_P0036481177 (aa)--
MGP_CAROLIEiJ_T0036480-1224XM_021181919MGP_CAROLIEiJ_P0036480317 (aa)XP_021037578UPI000A31A54F
Gene Model
Click here to download MGP_CAROLIEiJ_G0019209's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019209's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0019209Apex19993.691ENSG00000100823APEX19997.315Homo_sapiens
MGP_CAROLIEiJ_G0019209Apex18869.784ENSAPOG00000017002apex19965.287Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019209Apex19994.953ENSAMEG00000005418APEX19994.953Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019209Apex18771.480ENSACIG00000010653apex19770.833Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019209Apex18869.424ENSAOCG00000009649apex19965.190Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019209Apex18869.424ENSAPEG00000021453apex19965.190Amphiprion_percula
MGP_CAROLIEiJ_G0019209Apex19967.516ENSATEG00000002883apex19767.516Anabas_testudineus
MGP_CAROLIEiJ_G0019209Apex19970.625ENSACAG00000008099APEX19970.625Anolis_carolinensis
MGP_CAROLIEiJ_G0019209Apex19994.953ENSANAG00000030117APEX19994.953Aotus_nancymaae
MGP_CAROLIEiJ_G0019209Apex18772.000ENSACLG00000018441apex19967.516Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019209Apex19966.458ENSAMXG00000034699apex19966.458Astyanax_mexicanus
MGP_CAROLIEiJ_G0019209Apex19992.744ENSBTAG00000002745APEX19992.744Bos_taurus
MGP_CAROLIEiJ_G0019209Apex18045.312WBGene00001372exo-38845.312Caenorhabditis_elegans
MGP_CAROLIEiJ_G0019209Apex19994.953ENSCJAG00000009726APEX19994.953Callithrix_jacchus
MGP_CAROLIEiJ_G0019209Apex19994.953ENSCAFG00000032033APEX19994.953Canis_familiaris
MGP_CAROLIEiJ_G0019209Apex19994.953ENSCAFG00020014377-9994.953Canis_lupus_dingo
MGP_CAROLIEiJ_G0019209Apex19793.023ENSCAFG00020023002-9693.023Canis_lupus_dingo
MGP_CAROLIEiJ_G0019209Apex19778.488ENSCHIG00000014537-9973.955Capra_hircus
MGP_CAROLIEiJ_G0019209Apex19992.429ENSCHIG00000007298-9992.429Capra_hircus
MGP_CAROLIEiJ_G0019209Apex19993.375ENSTSYG00000034813APEX19993.375Carlito_syrichta
MGP_CAROLIEiJ_G0019209Apex18587.407ENSCAPG00000016235APEX19095.745Cavia_aperea
MGP_CAROLIEiJ_G0019209Apex19993.060ENSCPOG00000030909APEX19993.060Cavia_porcellus
MGP_CAROLIEiJ_G0019209Apex19994.953ENSCCAG00000033056-9994.953Cebus_capucinus
MGP_CAROLIEiJ_G0019209Apex19981.388ENSCCAG00000031931-9981.388Cebus_capucinus
MGP_CAROLIEiJ_G0019209Apex19993.691ENSCATG00000015580APEX19993.691Cercocebus_atys
MGP_CAROLIEiJ_G0019209Apex110092.697ENSCLAG00000001002APEX19993.691Chinchilla_lanigera
MGP_CAROLIEiJ_G0019209Apex19993.375ENSCSAG00000016670-9993.375Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019209Apex19993.375ENSCSAG00000016685-9993.375Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019209Apex19971.698ENSCPBG00000009567APEX19971.698Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019209Apex19154.762ENSCING00000008137-9354.762Ciona_intestinalis
MGP_CAROLIEiJ_G0019209Apex18352.453ENSCSAVG00000007144-9953.876Ciona_savignyi
MGP_CAROLIEiJ_G0019209Apex19994.006ENSCANG00000030726APEX19994.006Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019209Apex110094.350ENSCGRG00001017046Apex19993.987Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019209Apex110094.350ENSCGRG00000008984Apex19993.987Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019209Apex19965.190ENSCSEG00000017499apex19965.190Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019209Apex19967.197ENSCVAG00000022075apex19967.197Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019209Apex19966.456ENSDARG00000045843apex19966.139Danio_rerio
MGP_CAROLIEiJ_G0019209Apex110091.011ENSDNOG00000042234APEX19489.590Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019209Apex19993.375ENSDORG00000001616Apex19993.375Dipodomys_ordii
MGP_CAROLIEiJ_G0019209Apex19993.375ENSETEG00000004855-9993.375Echinops_telfairi
MGP_CAROLIEiJ_G0019209Apex17563.866ENSEBUG00000000622-9163.866Eptatretus_burgeri
MGP_CAROLIEiJ_G0019209Apex19994.953ENSEASG00005017489APEX17394.953Equus_asinus_asinus
MGP_CAROLIEiJ_G0019209Apex19994.953ENSECAG00000022325APEX18194.953Equus_caballus
MGP_CAROLIEiJ_G0019209Apex19192.708ENSEEUG00000012569APEX110092.708Erinaceus_europaeus
MGP_CAROLIEiJ_G0019209Apex19965.823ENSELUG00000021706apex19966.139Esox_lucius
MGP_CAROLIEiJ_G0019209Apex110094.944ENSFCAG00000030869APEX19995.584Felis_catus
MGP_CAROLIEiJ_G0019209Apex19993.375ENSFDAG00000006120APEX19993.375Fukomys_damarensis
MGP_CAROLIEiJ_G0019209Apex19969.108ENSFHEG00000009031apex18369.108Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019209Apex19962.420ENSGMOG00000007943apex19962.420Gadus_morhua
MGP_CAROLIEiJ_G0019209Apex19968.153ENSGAFG00000005311apex19968.153Gambusia_affinis
MGP_CAROLIEiJ_G0019209Apex19966.456ENSGACG00000019497apex19969.811Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019209Apex19971.069ENSGAGG00000014999APEX19971.069Gopherus_agassizii
MGP_CAROLIEiJ_G0019209Apex19994.006ENSGGOG00000002128APEX19994.006Gorilla_gorilla
MGP_CAROLIEiJ_G0019209Apex19966.879ENSHBUG00000005894apex19967.619Haplochromis_burtoni
MGP_CAROLIEiJ_G0019209Apex19993.691ENSHGLG00000002848APEX19993.691Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019209Apex19993.691ENSHGLG00100017878APEX19993.691Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019209Apex19966.667ENSHCOG00000009961apex19966.667Hippocampus_comes
MGP_CAROLIEiJ_G0019209Apex19968.553ENSIPUG00000005799apex19968.553Ictalurus_punctatus
MGP_CAROLIEiJ_G0019209Apex19993.691ENSSTOG00000010096APEX19993.691Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019209Apex19585.461ENSJJAG00000020465-9685.461Jaculus_jaculus
MGP_CAROLIEiJ_G0019209Apex19992.744ENSJJAG00000012067-9992.744Jaculus_jaculus
MGP_CAROLIEiJ_G0019209Apex19982.965ENSJJAG00000003660-9982.965Jaculus_jaculus
MGP_CAROLIEiJ_G0019209Apex19967.197ENSKMAG00000021171apex19967.197Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019209Apex19964.968ENSLBEG00000010248apex19964.968Labrus_bergylta
MGP_CAROLIEiJ_G0019209Apex19966.772ENSLACG00000008617APEX19966.772Latimeria_chalumnae
MGP_CAROLIEiJ_G0019209Apex18131.783ENSLACG00000000865APEX25031.783Latimeria_chalumnae
MGP_CAROLIEiJ_G0019209Apex19966.978ENSLOCG00000015516apex19966.978Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019209Apex19992.429ENSLAFG00000021872APEX19992.429Loxodonta_africana
MGP_CAROLIEiJ_G0019209Apex19993.375ENSMFAG00000002565APEX19993.375Macaca_fascicularis
MGP_CAROLIEiJ_G0019209Apex19993.375ENSMMUG00000048039APEX19993.375Macaca_mulatta
MGP_CAROLIEiJ_G0019209Apex19993.375ENSMNEG00000036944APEX19993.375Macaca_nemestrina
MGP_CAROLIEiJ_G0019209Apex19993.691ENSMLEG00000042125APEX19993.691Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019209Apex19967.197ENSMAMG00000023526apex19967.197Mastacembelus_armatus
MGP_CAROLIEiJ_G0019209Apex18772.000ENSMZEG00005014187apex19967.516Maylandia_zebra
MGP_CAROLIEiJ_G0019209Apex110093.785ENSMAUG00000013994Apex19993.987Mesocricetus_auratus
MGP_CAROLIEiJ_G0019209Apex19994.637ENSMICG00000043554APEX19994.637Microcebus_murinus
MGP_CAROLIEiJ_G0019209Apex110094.915ENSMOCG00000013721Apex19995.253Microtus_ochrogaster
MGP_CAROLIEiJ_G0019209Apex18868.100ENSMMOG00000010031apex19763.836Mola_mola
MGP_CAROLIEiJ_G0019209Apex19983.699ENSMODG00000007125APEX19985.047Monodelphis_domestica
MGP_CAROLIEiJ_G0019209Apex18864.029ENSMALG00000011699apex17863.014Monopterus_albus
MGP_CAROLIEiJ_G0019209Apex110099.435ENSMUSG00000035960Apex110099.435Mus_musculus
MGP_CAROLIEiJ_G0019209Apex110098.305MGP_PahariEiJ_G0030232Apex110098.305Mus_pahari
MGP_CAROLIEiJ_G0019209Apex110099.435MGP_SPRETEiJ_G0020101Apex110099.435Mus_spretus
MGP_CAROLIEiJ_G0019209Apex19994.044ENSMLUG00000028957APEX19994.044Myotis_lucifugus
MGP_CAROLIEiJ_G0019209Apex19994.322ENSNGAG00000002725-9994.322Nannospalax_galili
MGP_CAROLIEiJ_G0019209Apex110072.472ENSNGAG00000021748-9572.403Nannospalax_galili
MGP_CAROLIEiJ_G0019209Apex18771.636ENSNBRG00000005334apex19167.197Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019209Apex19994.322ENSNLEG00000010839APEX19994.322Nomascus_leucogenys
MGP_CAROLIEiJ_G0019209Apex19985.127ENSMEUG00000014519APEX19985.127Notamacropus_eugenii
MGP_CAROLIEiJ_G0019209Apex19993.060ENSOPRG00000014029APEX19993.060Ochotona_princeps
MGP_CAROLIEiJ_G0019209Apex110075.281ENSODEG00000004777-9975.405Octodon_degus
MGP_CAROLIEiJ_G0019209Apex19994.006ENSODEG00000001703-9994.006Octodon_degus
MGP_CAROLIEiJ_G0019209Apex19970.279ENSODEG00000006583-9970.279Octodon_degus
MGP_CAROLIEiJ_G0019209Apex18772.202ENSONIG00000012089apex19967.834Oreochromis_niloticus
MGP_CAROLIEiJ_G0019209Apex19082.746ENSOANG00000008836APEX18078.638Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019209Apex19995.268ENSOCUG00000005022APEX19995.268Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019209Apex19967.823ENSORLG00000012378apex19967.823Oryzias_latipes
MGP_CAROLIEiJ_G0019209Apex19967.823ENSORLG00020021371apex19967.823Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019209Apex19967.823ENSORLG00015020089apex19967.823Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019209Apex19967.516ENSOMEG00000018876apex19967.516Oryzias_melastigma
MGP_CAROLIEiJ_G0019209Apex19993.375ENSOGAG00000013335-9993.375Otolemur_garnettii
MGP_CAROLIEiJ_G0019209Apex110088.621ENSOGAG00000029355-9988.621Otolemur_garnettii
MGP_CAROLIEiJ_G0019209Apex19788.961ENSOARG00000001876-10088.961Ovis_aries
MGP_CAROLIEiJ_G0019209Apex19991.483ENSOARG00000019740-9991.483Ovis_aries
MGP_CAROLIEiJ_G0019209Apex19883.333ENSOARG00000014424-9978.594Ovis_aries
MGP_CAROLIEiJ_G0019209Apex19994.006ENSPPAG00000038760APEX19994.006Pan_paniscus
MGP_CAROLIEiJ_G0019209Apex110095.506ENSPPRG00000011794APEX19995.899Panthera_pardus
MGP_CAROLIEiJ_G0019209Apex110094.944ENSPTIG00000014829APEX19995.584Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019209Apex19994.006ENSPTRG00000006093APEX19994.006Pan_troglodytes
MGP_CAROLIEiJ_G0019209Apex19993.691ENSPANG00000022757APEX19993.691Papio_anubis
MGP_CAROLIEiJ_G0019209Apex18768.841ENSPKIG00000003504apex19965.015Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019209Apex17666.529ENSPMGG00000016596apex17266.529Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0019209Apex110097.740ENSPEMG00000019097Apex19996.835Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019209Apex19465.116ENSPMAG00000007275-9965.116Petromyzon_marinus
MGP_CAROLIEiJ_G0019209Apex19983.648ENSPCIG00000023274APEX19985.312Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019209Apex19968.153ENSPFOG00000004178apex19968.153Poecilia_formosa
MGP_CAROLIEiJ_G0019209Apex19968.354ENSPLAG00000012779apex19967.834Poecilia_latipinna
MGP_CAROLIEiJ_G0019209Apex19968.153ENSPMEG00000019623apex19968.153Poecilia_mexicana
MGP_CAROLIEiJ_G0019209Apex19967.834ENSPREG00000014298apex19967.834Poecilia_reticulata
MGP_CAROLIEiJ_G0019209Apex19993.375ENSPPYG00000005565APEX19993.375Pongo_abelii
MGP_CAROLIEiJ_G0019209Apex110089.888ENSPCAG00000010376APEX19990.536Procavia_capensis
MGP_CAROLIEiJ_G0019209Apex19994.637ENSPCOG00000021564APEX19994.637Propithecus_coquereli
MGP_CAROLIEiJ_G0019209Apex19993.417ENSPVAG00000010736APEX19993.417Pteropus_vampyrus
MGP_CAROLIEiJ_G0019209Apex18772.000ENSPNYG00000023940apex19967.516Pundamilia_nyererei
MGP_CAROLIEiJ_G0019209Apex110062.011ENSPNAG00000020897apex19665.763Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019209Apex110098.305ENSRNOG00000009663Apex19997.785Rattus_norvegicus
MGP_CAROLIEiJ_G0019209Apex19994.006ENSRBIG00000038325APEX19894.006Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019209Apex19980.380ENSSBOG00000031372-9980.380Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019209Apex19994.637ENSSBOG00000018921-9994.637Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019209Apex19982.663ENSSHAG00000013524APEX19983.692Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019209Apex19963.608ENSSFOG00015001948apex19963.608Scleropages_formosus
MGP_CAROLIEiJ_G0019209Apex19965.924ENSSMAG00000013348apex19965.924Scophthalmus_maximus
MGP_CAROLIEiJ_G0019209Apex19966.879ENSSDUG00000016377apex19966.879Seriola_dumerili
MGP_CAROLIEiJ_G0019209Apex19967.197ENSSLDG00000023005apex19967.197Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019209Apex19072.727ENSSPUG00000000531APEX19672.727Sphenodon_punctatus
MGP_CAROLIEiJ_G0019209Apex19965.605ENSSPAG00000000458apex19965.605Stegastes_partitus
MGP_CAROLIEiJ_G0019209Apex19994.953ENSSSCG00000040060-9994.953Sus_scrofa
MGP_CAROLIEiJ_G0019209Apex110058.192ENSSSCG00000039705-9955.590Sus_scrofa
MGP_CAROLIEiJ_G0019209Apex17460.851ENSTGUG00000014378APEX19960.851Taeniopygia_guttata
MGP_CAROLIEiJ_G0019209Apex18768.231ENSTRUG00000004268apex19464.013Takifugu_rubripes
MGP_CAROLIEiJ_G0019209Apex19964.331ENSTNIG00000005778apex19964.331Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019209Apex19990.852ENSTBEG00000006405APEX19990.852Tupaia_belangeri
MGP_CAROLIEiJ_G0019209Apex17493.617ENSTTRG00000007860APEX19993.617Tursiops_truncatus
MGP_CAROLIEiJ_G0019209Apex19994.637ENSUAMG00000010457APEX19994.637Ursus_americanus
MGP_CAROLIEiJ_G0019209Apex19994.637ENSUMAG00000009178APEX19994.637Ursus_maritimus
MGP_CAROLIEiJ_G0019209Apex17488.511ENSVPAG00000005083APEX19988.511Vicugna_pacos
MGP_CAROLIEiJ_G0019209Apex19994.953ENSVVUG00000009010APEX19994.953Vulpes_vulpes
MGP_CAROLIEiJ_G0019209Apex19966.771ENSXETG00000024773apex19966.771Xenopus_tropicalis
MGP_CAROLIEiJ_G0019209Apex19968.471ENSXCOG00000015233apex19968.471Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019209Apex19968.471ENSXMAG00000006195apex19968.471Xiphophorus_maculatus

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