EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019337 (Gene tree)
Gene ID: 110309487
Gene Symbol: Rnf17
Alias: MMIP-2
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 113070 bases
Position: chr14:47656508-47769577
Accession: 110309487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0036927	TUDOR	PF00567.24	2.2e-81	1	5
MGP_CAROLIEiJ_P0036927	TUDOR	PF00567.24	2.2e-81	2	5
MGP_CAROLIEiJ_P0036927	TUDOR	PF00567.24	2.2e-81	3	5
MGP_CAROLIEiJ_P0036927	TUDOR	PF00567.24	2.2e-81	4	5
MGP_CAROLIEiJ_P0036927	TUDOR	PF00567.24	2.2e-81	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0036927	-	5148	XM_021182183	MGP_CAROLIEiJ_P0036927	1640 (aa)	XP_021037842	UPI000A317EC3

Gene Model

Click here to download MGP_CAROLIEiJ_G0019337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019337	Rnf17	100	74.063	ENSG00000132972	RNF17	99	80.094	Homo_sapiens
MGP_CAROLIEiJ_G0019337	Rnf17	85	31.763	ENSAPOG00000017034	rnf17	75	35.180	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.513	ENSAMEG00000017340	RNF17	100	76.513	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019337	Rnf17	99	32.555	ENSAOCG00000018283	rnf17	99	32.600	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019337	Rnf17	73	34.628	ENSAPEG00000022338	rnf17	83	34.682	Amphiprion_percula
MGP_CAROLIEiJ_G0019337	Rnf17	86	32.457	ENSATEG00000002067	rnf17	97	32.872	Anabas_testudineus
MGP_CAROLIEiJ_G0019337	Rnf17	88	48.464	ENSAPLG00000003969	RNF17	100	48.669	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019337	Rnf17	91	46.017	ENSACAG00000001418	RNF17	92	46.017	Anolis_carolinensis
MGP_CAROLIEiJ_G0019337	Rnf17	92	71.366	ENSANAG00000029969	RNF17	95	71.366	Aotus_nancymaae
MGP_CAROLIEiJ_G0019337	Rnf17	99	30.695	ENSACLG00000018279	rnf17	90	34.469	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019337	Rnf17	88	34.539	ENSAMXG00000011002	rnf17	97	34.539	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019337	Rnf17	59	77.300	ENSBTAG00000000278	RNF17	100	77.300	Bos_taurus
MGP_CAROLIEiJ_G0019337	Rnf17	100	72.854	ENSCJAG00000018937	RNF17	100	73.481	Callithrix_jacchus
MGP_CAROLIEiJ_G0019337	Rnf17	98	76.267	ENSCAFG00000007418	RNF17	100	79.862	Canis_familiaris
MGP_CAROLIEiJ_G0019337	Rnf17	51	83.817	ENSCAFG00020002919	-	100	83.817	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019337	Rnf17	92	78.885	ENSCHIG00000026716	RNF17	99	78.736	Capra_hircus
MGP_CAROLIEiJ_G0019337	Rnf17	97	72.795	ENSTSYG00000000365	RNF17	99	72.795	Carlito_syrichta
MGP_CAROLIEiJ_G0019337	Rnf17	82	66.998	ENSCAPG00000012908	RNF17	99	66.915	Cavia_aperea
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.019	ENSCCAG00000026725	RNF17	99	73.630	Cebus_capucinus
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.640	ENSCATG00000040352	RNF17	100	75.113	Cercocebus_atys
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.156	ENSCLAG00000004127	RNF17	100	76.156	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.640	ENSCSAG00000018019	RNF17	100	73.640	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019337	Rnf17	90	80.508	ENSCHOG00000013310	RNF17	91	80.508	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019337	Rnf17	91	56.764	ENSCPBG00000020920	RNF17	96	57.095	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019337	Rnf17	99	73.140	ENSCANG00000032927	RNF17	99	75.113	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019337	Rnf17	100	90.560	ENSCGRG00001022658	Rnf17	100	90.560	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019337	Rnf17	100	90.560	ENSCGRG00000009924	Rnf17	100	90.560	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019337	Rnf17	79	34.366	ENSCSEG00000008626	rnf17	84	34.366	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019337	Rnf17	68	32.437	ENSCVAG00000017008	rnf17	84	32.437	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019337	Rnf17	98	31.752	ENSDARG00000056387	rnf17	99	31.691	Danio_rerio
MGP_CAROLIEiJ_G0019337	Rnf17	99	75.850	ENSDNOG00000006115	RNF17	99	75.850	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019337	Rnf17	73	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
MGP_CAROLIEiJ_G0019337	Rnf17	100	78.229	ENSECAG00000017152	RNF17	99	78.229	Equus_caballus
MGP_CAROLIEiJ_G0019337	Rnf17	83	64.754	ENSEEUG00000000332	RNF17	90	64.754	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019337	Rnf17	87	36.111	ENSELUG00000005626	rnf17	89	36.111	Esox_lucius
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.709	ENSFCAG00000004914	RNF17	100	78.306	Felis_catus
MGP_CAROLIEiJ_G0019337	Rnf17	86	49.960	ENSFALG00000008766	RNF17	90	50.902	Ficedula_albicollis
MGP_CAROLIEiJ_G0019337	Rnf17	100	75.015	ENSFDAG00000017857	RNF17	100	75.015	Fukomys_damarensis
MGP_CAROLIEiJ_G0019337	Rnf17	97	31.614	ENSFHEG00000014822	rnf17	98	31.703	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019337	Rnf17	60	35.542	ENSGMOG00000015560	-	97	35.542	Gadus_morhua
MGP_CAROLIEiJ_G0019337	Rnf17	73	33.306	ENSGAFG00000004463	rnf17	89	33.443	Gambusia_affinis
MGP_CAROLIEiJ_G0019337	Rnf17	92	55.044	ENSGAGG00000016999	RNF17	91	55.409	Gopherus_agassizii
MGP_CAROLIEiJ_G0019337	Rnf17	100	74.244	ENSGGOG00000014491	RNF17	100	78.840	Gorilla_gorilla
MGP_CAROLIEiJ_G0019337	Rnf17	76	34.066	ENSHBUG00000003554	rnf17	74	34.472	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.228	ENSHGLG00000007270	RNF17	100	76.228	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.107	ENSHGLG00100017393	RNF17	100	76.107	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019337	Rnf17	62	39.130	ENSHCOG00000017676	rnf17	78	39.130	Hippocampus_comes
MGP_CAROLIEiJ_G0019337	Rnf17	73	35.691	ENSIPUG00000001087	rnf17	80	35.691	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019337	Rnf17	53	73.294	ENSSTOG00000011255	-	100	73.294	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019337	Rnf17	100	80.255	ENSJJAG00000016584	Rnf17	100	80.255	Jaculus_jaculus
MGP_CAROLIEiJ_G0019337	Rnf17	89	34.448	ENSKMAG00000013403	rnf17	90	34.416	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019337	Rnf17	86	30.165	ENSLBEG00000014910	rnf17	73	33.658	Labrus_bergylta
MGP_CAROLIEiJ_G0019337	Rnf17	88	45.802	ENSLACG00000000323	RNF17	99	45.802	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019337	Rnf17	97	30.231	ENSLOCG00000010768	rnf17	98	30.387	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.700	ENSMFAG00000032388	RNF17	100	75.450	Macaca_fascicularis
MGP_CAROLIEiJ_G0019337	Rnf17	100	74.849	ENSMMUG00000014610	RNF17	100	78.470	Macaca_mulatta
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.640	ENSMNEG00000011234	RNF17	100	78.395	Macaca_nemestrina
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.398	ENSMLEG00000030227	RNF17	100	75.225	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019337	Rnf17	73	33.388	ENSMAMG00000020403	rnf17	86	33.388	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019337	Rnf17	99	30.755	ENSMZEG00005019166	rnf17	90	34.550	Maylandia_zebra
MGP_CAROLIEiJ_G0019337	Rnf17	76	49.565	ENSMGAG00000015138	RNF17	100	49.565	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019337	Rnf17	99	86.646	ENSMAUG00000004788	Rnf17	99	86.646	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019337	Rnf17	100	77.132	ENSMICG00000010364	RNF17	100	77.132	Microcebus_murinus
MGP_CAROLIEiJ_G0019337	Rnf17	59	90.300	ENSMOCG00000011818	-	100	90.300	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019337	Rnf17	73	40.288	ENSMMOG00000019514	rnf17	82	40.288	Mola_mola
MGP_CAROLIEiJ_G0019337	Rnf17	99	66.259	ENSMODG00000007827	RNF17	98	66.079	Monodelphis_domestica
MGP_CAROLIEiJ_G0019337	Rnf17	68	36.163	ENSMALG00000016943	rnf17	76	36.163	Monopterus_albus
MGP_CAROLIEiJ_G0019337	Rnf17	100	98.171	ENSMUSG00000000365	Rnf17	100	98.171	Mus_musculus
MGP_CAROLIEiJ_G0019337	Rnf17	100	95.976	MGP_PahariEiJ_G0030355	Rnf17	100	95.976	Mus_pahari
MGP_CAROLIEiJ_G0019337	Rnf17	100	98.049	MGP_SPRETEiJ_G0020228	Rnf17	100	98.049	Mus_spretus
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.956	ENSMPUG00000013305	RNF17	100	76.956	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019337	Rnf17	100	75.589	ENSMLUG00000003903	RNF17	100	75.589	Myotis_lucifugus
MGP_CAROLIEiJ_G0019337	Rnf17	100	82.389	ENSNGAG00000013553	Rnf17	100	82.389	Nannospalax_galili
MGP_CAROLIEiJ_G0019337	Rnf17	73	36.148	ENSNBRG00000012006	rnf17	82	36.148	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.337	ENSNLEG00000013780	RNF17	100	78.245	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019337	Rnf17	67	66.027	ENSMEUG00000003276	-	61	66.027	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019337	Rnf17	88	68.136	ENSOPRG00000016743	-	88	68.136	Ochotona_princeps
MGP_CAROLIEiJ_G0019337	Rnf17	53	70.105	ENSODEG00000005443	-	100	70.105	Octodon_degus
MGP_CAROLIEiJ_G0019337	Rnf17	99	30.414	ENSONIG00000015746	rnf17	99	34.446	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.774	ENSOCUG00000007384	RNF17	100	76.713	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019337	Rnf17	73	35.984	ENSORLG00000012818	rnf17	99	33.582	Oryzias_latipes
MGP_CAROLIEiJ_G0019337	Rnf17	87	35.720	ENSORLG00020009879	-	89	35.826	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019337	Rnf17	87	35.656	ENSORLG00015013027	-	89	35.895	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019337	Rnf17	66	33.274	ENSOMEG00000009891	rnf17	85	33.154	Oryzias_melastigma
MGP_CAROLIEiJ_G0019337	Rnf17	100	74.441	ENSOGAG00000014803	RNF17	100	74.441	Otolemur_garnettii
MGP_CAROLIEiJ_G0019337	Rnf17	98	76.529	ENSOARG00000014641	RNF17	99	76.405	Ovis_aries
MGP_CAROLIEiJ_G0019337	Rnf17	93	78.539	ENSPPAG00000028779	RNF17	100	78.539	Pan_paniscus
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.346	ENSPPRG00000009230	RNF17	100	78.009	Panthera_pardus
MGP_CAROLIEiJ_G0019337	Rnf17	100	76.346	ENSPTIG00000001738	RNF17	100	78.158	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.942	ENSPTRG00000005713	RNF17	100	78.464	Pan_troglodytes
MGP_CAROLIEiJ_G0019337	Rnf17	100	73.640	ENSPANG00000007640	RNF17	100	78.320	Papio_anubis
MGP_CAROLIEiJ_G0019337	Rnf17	76	36.135	ENSPKIG00000001648	rnf17	90	36.416	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019337	Rnf17	73	60.247	ENSPSIG00000011245	RNF17	100	60.412	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019337	Rnf17	100	90.865	ENSPEMG00000008693	Rnf17	100	90.865	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019337	Rnf17	67	65.615	ENSPCIG00000009190	-	95	65.615	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019337	Rnf17	97	30.978	ENSPFOG00000007124	rnf17	87	34.054	Poecilia_formosa
MGP_CAROLIEiJ_G0019337	Rnf17	97	31.235	ENSPLAG00000006198	rnf17	98	31.367	Poecilia_latipinna
MGP_CAROLIEiJ_G0019337	Rnf17	97	31.547	ENSPMEG00000022432	rnf17	98	31.696	Poecilia_mexicana
MGP_CAROLIEiJ_G0019337	Rnf17	73	32.428	ENSPREG00000001414	rnf17	83	32.437	Poecilia_reticulata
MGP_CAROLIEiJ_G0019337	Rnf17	100	74.002	ENSPPYG00000005215	RNF17	100	74.002	Pongo_abelii
MGP_CAROLIEiJ_G0019337	Rnf17	72	84.211	ENSPCAG00000002665	RNF17	76	84.211	Procavia_capensis
MGP_CAROLIEiJ_G0019337	Rnf17	91	62.032	ENSPCOG00000020211	RNF17	95	62.032	Propithecus_coquereli
MGP_CAROLIEiJ_G0019337	Rnf17	100	66.235	ENSPVAG00000013021	RNF17	100	66.235	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019337	Rnf17	73	35.226	ENSPNAG00000027505	rnf17	85	35.226	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019337	Rnf17	100	92.866	ENSRNOG00000008059	Rnf17	100	92.866	Rattus_norvegicus
MGP_CAROLIEiJ_G0019337	Rnf17	100	71.886	ENSRBIG00000027010	RNF17	100	74.681	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019337	Rnf17	100	72.733	ENSRROG00000022801	RNF17	100	77.703	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019337	Rnf17	99	73.378	ENSSBOG00000021661	RNF17	99	74.370	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019337	Rnf17	99	65.831	ENSSHAG00000005609	RNF17	100	65.455	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019337	Rnf17	73	35.294	ENSSFOG00015023037	rnf17	89	35.053	Scleropages_formosus
MGP_CAROLIEiJ_G0019337	Rnf17	89	31.117	ENSSMAG00000007429	rnf17	75	34.386	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019337	Rnf17	86	31.458	ENSSDUG00000013530	rnf17	97	31.503	Seriola_dumerili
MGP_CAROLIEiJ_G0019337	Rnf17	89	31.451	ENSSLDG00000019577	rnf17	99	31.146	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019337	Rnf17	100	70.252	ENSSARG00000003016	RNF17	94	70.252	Sorex_araneus
MGP_CAROLIEiJ_G0019337	Rnf17	86	55.743	ENSSPUG00000008917	RNF17	93	55.743	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019337	Rnf17	69	34.026	ENSSPAG00000001925	rnf17	76	34.335	Stegastes_partitus
MGP_CAROLIEiJ_G0019337	Rnf17	100	71.480	ENSSSCG00000009572	RNF17	100	76.687	Sus_scrofa
MGP_CAROLIEiJ_G0019337	Rnf17	52	52.616	ENSTGUG00000011267	-	100	52.616	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019337	Rnf17	76	33.307	ENSTRUG00000015498	rnf17	77	33.387	Takifugu_rubripes
MGP_CAROLIEiJ_G0019337	Rnf17	73	33.995	ENSTNIG00000015681	rnf17	100	33.995	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019337	Rnf17	96	64.946	ENSTBEG00000000282	RNF17	96	64.946	Tupaia_belangeri
MGP_CAROLIEiJ_G0019337	Rnf17	99	68.784	ENSTTRG00000012698	RNF17	99	68.501	Tursiops_truncatus
MGP_CAROLIEiJ_G0019337	Rnf17	50	84.433	ENSUMAG00000013953	-	100	84.433	Ursus_maritimus
MGP_CAROLIEiJ_G0019337	Rnf17	83	88.732	ENSVPAG00000011388	RNF17	85	88.732	Vicugna_pacos
MGP_CAROLIEiJ_G0019337	Rnf17	95	83.160	ENSVVUG00000006226	RNF17	100	83.333	Vulpes_vulpes
MGP_CAROLIEiJ_G0019337	Rnf17	70	40.820	ENSXETG00000034020	RNF17	99	44.524	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019337	Rnf17	87	30.559	ENSXCOG00000018295	rnf17	76	33.626	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019337	Rnf17	87	30.838	ENSXMAG00000014747	rnf17	77	34.190	Xiphophorus_maculatus