EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019367 (Gene tree)
Gene ID: 110309030
Gene Symbol: Setdb2
Alias: KMT1F|LOC239122
Full Name: SET domain bifurcated 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 39070 bases
Position: chr14:50633290-50672359
Accession: 110309030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0037012	MBD	PF01429.19	3.5e-07	1	1
MGP_CAROLIEiJ_P0037013	MBD	PF01429.19	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0037016	-	410	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037015	-	1765	-	MGP_CAROLIEiJ_P0037015	140 (aa)	-	-
MGP_CAROLIEiJ_T0037014	-	720	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037013	-	3028	-	MGP_CAROLIEiJ_P0037013	713 (aa)	-	-
MGP_CAROLIEiJ_T0037012	-	2989	XM_021181369	MGP_CAROLIEiJ_P0037012	697 (aa)	XP_021037028	UPI000A31648A

Gene Model

Click here to download MGP_CAROLIEiJ_G0019367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	ENSG00000136169	SETDB2	100	67.232	Homo_sapiens
MGP_CAROLIEiJ_G0019367	Setdb2	56	53.763	ENSAPOG00000020220	-	87	53.763	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019367	Setdb2	99	66.476	ENSAMEG00000003443	SETDB2	70	66.476	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019367	Setdb2	82	42.063	ENSACIG00000009349	-	92	42.063	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019367	Setdb2	75	42.029	ENSAOCG00000006560	-	95	32.609	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019367	Setdb2	54	42.105	ENSAPEG00000009529	-	70	41.259	Amphiprion_percula
MGP_CAROLIEiJ_G0019367	Setdb2	51	54.118	ENSATEG00000008915	-	61	54.118	Anabas_testudineus
MGP_CAROLIEiJ_G0019367	Setdb2	99	46.023	ENSAPLG00000009061	SETDB2	100	46.023	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019367	Setdb2	100	42.135	ENSACAG00000014036	SETDB2	100	42.135	Anolis_carolinensis
MGP_CAROLIEiJ_G0019367	Setdb2	90	66.248	ENSANAG00000028107	SETDB2	100	66.248	Aotus_nancymaae
MGP_CAROLIEiJ_G0019367	Setdb2	75	39.456	ENSACLG00000004046	-	84	39.456	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019367	Setdb2	70	61.290	ENSAMXG00000016092	setdb2	80	61.290	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019367	Setdb2	100	64.589	ENSBTAG00000007329	SETDB2	100	64.589	Bos_taurus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.761	ENSCJAG00000008864	SETDB2	100	66.761	Callithrix_jacchus
MGP_CAROLIEiJ_G0019367	Setdb2	99	64.706	ENSCAFG00000004341	SETDB2	100	64.706	Canis_familiaris
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.771	ENSCAFG00020020283	SETDB2	100	65.771	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019367	Setdb2	100	64.873	ENSCHIG00000014895	SETDB2	100	64.873	Capra_hircus
MGP_CAROLIEiJ_G0019367	Setdb2	99	65.248	ENSTSYG00000014051	SETDB2	99	65.248	Carlito_syrichta
MGP_CAROLIEiJ_G0019367	Setdb2	65	63.636	ENSCAPG00000014168	-	95	63.636	Cavia_aperea
MGP_CAROLIEiJ_G0019367	Setdb2	92	62.423	ENSCPOG00000002194	SETDB2	97	62.423	Cavia_porcellus
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.185	ENSCCAG00000031604	SETDB2	100	67.185	Cebus_capucinus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.761	ENSCATG00000002055	SETDB2	100	66.761	Cercocebus_atys
MGP_CAROLIEiJ_G0019367	Setdb2	100	64.356	ENSCLAG00000007348	SETDB2	100	64.356	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.478	ENSCSAG00000017713	SETDB2	100	66.478	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019367	Setdb2	90	43.318	ENSCPBG00000008524	SETDB2	92	41.494	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019367	Setdb2	99	62.117	ENSCANG00000033506	SETDB2	100	61.944	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019367	Setdb2	100	78.223	ENSCGRG00001011194	Setdb2	100	78.223	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019367	Setdb2	100	78.223	ENSCGRG00000000801	Setdb2	100	78.223	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019367	Setdb2	67	55.056	ENSCVAG00000004116	-	95	30.739	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019367	Setdb2	59	62.295	ENSDARG00000101462	setdb2	70	62.295	Danio_rerio
MGP_CAROLIEiJ_G0019367	Setdb2	100	63.143	ENSDNOG00000033679	SETDB2	100	63.143	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019367	Setdb2	99	63.188	ENSDORG00000026163	Setdb2	100	63.188	Dipodomys_ordii
MGP_CAROLIEiJ_G0019367	Setdb2	81	67.593	ENSETEG00000004821	SETDB2	81	67.593	Echinops_telfairi
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.997	ENSEASG00005017285	SETDB2	100	66.997	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.139	ENSECAG00000020357	SETDB2	100	67.139	Equus_caballus
MGP_CAROLIEiJ_G0019367	Setdb2	99	58.699	ENSEEUG00000011247	SETDB2	100	58.699	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019367	Setdb2	69	59.574	ENSELUG00000024242	-	76	59.574	Esox_lucius
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.431	ENSFCAG00000012034	SETDB2	100	66.431	Felis_catus
MGP_CAROLIEiJ_G0019367	Setdb2	99	45.219	ENSFALG00000008379	SETDB2	97	45.219	Ficedula_albicollis
MGP_CAROLIEiJ_G0019367	Setdb2	99	65.049	ENSFDAG00000017408	SETDB2	100	65.049	Fukomys_damarensis
MGP_CAROLIEiJ_G0019367	Setdb2	99	44.444	ENSGALG00000017006	SETDB2	97	44.444	Gallus_gallus
MGP_CAROLIEiJ_G0019367	Setdb2	89	33.071	ENSGAFG00000000077	-	95	33.071	Gambusia_affinis
MGP_CAROLIEiJ_G0019367	Setdb2	73	36.082	ENSGACG00000015463	-	75	36.426	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019367	Setdb2	99	47.514	ENSGAGG00000014099	SETDB2	96	47.514	Gopherus_agassizii
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	ENSGGOG00000016016	SETDB2	100	67.232	Gorilla_gorilla
MGP_CAROLIEiJ_G0019367	Setdb2	75	37.500	ENSHBUG00000001477	-	84	37.500	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.395	ENSHGLG00000003820	SETDB2	99	65.395	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.254	ENSHGLG00100008642	SETDB2	99	65.254	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019367	Setdb2	69	54.348	ENSHCOG00000007071	-	79	54.348	Hippocampus_comes
MGP_CAROLIEiJ_G0019367	Setdb2	68	60.227	ENSIPUG00000011157	setdb2	79	60.227	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.808	ENSSTOG00000002985	SETDB2	100	66.808	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019367	Setdb2	99	65.473	ENSJJAG00000011079	Setdb2	99	65.473	Jaculus_jaculus
MGP_CAROLIEiJ_G0019367	Setdb2	68	52.273	ENSKMAG00000012100	-	86	52.941	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019367	Setdb2	99	38.985	ENSLACG00000009640	SETDB2	99	37.646	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019367	Setdb2	98	33.960	ENSLOCG00000009739	-	96	35.007	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019367	Setdb2	99	65.358	ENSLAFG00000012612	SETDB2	100	65.358	Loxodonta_africana
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.090	ENSMFAG00000032631	SETDB2	100	67.090	Macaca_fascicularis
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.090	ENSMMUG00000013473	SETDB2	100	67.090	Macaca_mulatta
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.808	ENSMNEG00000037148	SETDB2	100	66.808	Macaca_nemestrina
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.761	ENSMLEG00000043613	SETDB2	100	66.761	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019367	Setdb2	74	56.522	ENSMAMG00000022781	-	82	56.522	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019367	Setdb2	75	39.456	ENSMZEG00005012098	-	84	39.456	Maylandia_zebra
MGP_CAROLIEiJ_G0019367	Setdb2	99	44.837	ENSMGAG00000015017	SETDB2	100	44.837	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019367	Setdb2	100	77.221	ENSMAUG00000012871	Setdb2	100	77.221	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.488	ENSMICG00000012641	SETDB2	100	65.488	Microcebus_murinus
MGP_CAROLIEiJ_G0019367	Setdb2	100	73.601	ENSMOCG00000021987	Setdb2	100	73.601	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019367	Setdb2	100	49.662	ENSMODG00000010929	SETDB2	100	49.863	Monodelphis_domestica
MGP_CAROLIEiJ_G0019367	Setdb2	70	54.023	ENSMALG00000001256	-	76	54.023	Monopterus_albus
MGP_CAROLIEiJ_G0019367	Setdb2	100	94.118	ENSMUSG00000071350	Setdb2	100	94.118	Mus_musculus
MGP_CAROLIEiJ_G0019367	Setdb2	100	91.248	MGP_PahariEiJ_G0030385	Setdb2	100	91.248	Mus_pahari
MGP_CAROLIEiJ_G0019367	Setdb2	100	94.118	MGP_SPRETEiJ_G0020259	Setdb2	100	94.118	Mus_spretus
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.581	ENSMPUG00000018019	SETDB2	100	65.581	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019367	Setdb2	99	64.143	ENSMLUG00000004378	SETDB2	99	64.143	Myotis_lucifugus
MGP_CAROLIEiJ_G0019367	Setdb2	100	72.532	ENSNGAG00000013911	Setdb2	100	72.532	Nannospalax_galili
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.090	ENSNLEG00000003613	SETDB2	100	67.090	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019367	Setdb2	93	44.853	ENSMEUG00000005220	-	100	44.853	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019367	Setdb2	84	66.289	ENSOPRG00000012261	SETDB2	83	66.289	Ochotona_princeps
MGP_CAROLIEiJ_G0019367	Setdb2	73	38.235	ENSONIG00000009000	-	90	37.762	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019367	Setdb2	99	49.789	ENSOANG00000015546	SETDB2	93	49.789	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019367	Setdb2	100	63.961	ENSOCUG00000003755	SETDB2	100	63.961	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019367	Setdb2	69	53.933	ENSORLG00000001147	-	78	53.933	Oryzias_latipes
MGP_CAROLIEiJ_G0019367	Setdb2	69	53.933	ENSORLG00020006680	-	78	53.933	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019367	Setdb2	69	53.933	ENSORLG00015009952	-	78	53.933	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019367	Setdb2	100	64.479	ENSOGAG00000005339	SETDB2	100	64.479	Otolemur_garnettii
MGP_CAROLIEiJ_G0019367	Setdb2	100	64.731	ENSOARG00000008487	SETDB2	100	64.731	Ovis_aries
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.373	ENSPPAG00000039854	SETDB2	100	67.373	Pan_paniscus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.856	ENSPPRG00000000069	SETDB2	100	66.856	Panthera_pardus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.997	ENSPTIG00000006314	SETDB2	100	66.997	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	ENSPTRG00000005873	SETDB2	100	67.232	Pan_troglodytes
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.808	ENSPANG00000017051	SETDB2	100	66.808	Papio_anubis
MGP_CAROLIEiJ_G0019367	Setdb2	74	59.574	ENSPKIG00000009795	-	84	59.574	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019367	Setdb2	99	44.640	ENSPSIG00000002200	SETDB2	95	44.640	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019367	Setdb2	100	52.348	ENSPCIG00000002912	SETDB2	100	52.573	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019367	Setdb2	99	32.422	ENSPFOG00000006673	-	94	32.422	Poecilia_formosa
MGP_CAROLIEiJ_G0019367	Setdb2	89	33.251	ENSPLAG00000016914	-	94	33.251	Poecilia_latipinna
MGP_CAROLIEiJ_G0019367	Setdb2	89	33.005	ENSPMEG00000003842	-	94	33.005	Poecilia_mexicana
MGP_CAROLIEiJ_G0019367	Setdb2	68	54.444	ENSPREG00000022531	-	94	33.744	Poecilia_reticulata
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	ENSPPYG00000005368	SETDB2	100	67.232	Pongo_abelii
MGP_CAROLIEiJ_G0019367	Setdb2	59	92.647	ENSPCAG00000010230	-	58	92.647	Procavia_capensis
MGP_CAROLIEiJ_G0019367	Setdb2	93	66.717	ENSPCOG00000017644	SETDB2	99	66.616	Propithecus_coquereli
MGP_CAROLIEiJ_G0019367	Setdb2	100	62.674	ENSPVAG00000006911	SETDB2	100	62.674	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019367	Setdb2	70	56.863	ENSPNAG00000011459	setdb2	80	57.843	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019367	Setdb2	100	84.648	ENSRNOG00000021680	Setdb2	100	84.648	Rattus_norvegicus
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	ENSRBIG00000006562	SETDB2	100	67.232	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.090	ENSRROG00000032499	SETDB2	100	67.090	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019367	Setdb2	100	67.185	ENSSBOG00000023249	SETDB2	100	67.185	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019367	Setdb2	100	52.316	ENSSHAG00000007281	SETDB2	100	52.957	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019367	Setdb2	69	64.773	ENSSFOG00015008204	-	75	64.773	Scleropages_formosus
MGP_CAROLIEiJ_G0019367	Setdb2	68	54.545	ENSSDUG00000002987	-	76	54.545	Seriola_dumerili
MGP_CAROLIEiJ_G0019367	Setdb2	68	55.682	ENSSLDG00000015081	-	75	55.682	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019367	Setdb2	100	61.560	ENSSARG00000009926	SETDB2	100	61.560	Sorex_araneus
MGP_CAROLIEiJ_G0019367	Setdb2	71	42.593	ENSSPAG00000006869	-	87	42.593	Stegastes_partitus
MGP_CAROLIEiJ_G0019367	Setdb2	100	65.248	ENSSSCG00000009395	SETDB2	100	65.248	Sus_scrofa
MGP_CAROLIEiJ_G0019367	Setdb2	86	94.872	ENSTBEG00000008013	SETDB2	100	54.179	Tupaia_belangeri
MGP_CAROLIEiJ_G0019367	Setdb2	100	63.173	ENSTTRG00000012932	SETDB2	100	63.173	Tursiops_truncatus
MGP_CAROLIEiJ_G0019367	Setdb2	100	66.572	ENSUMAG00000018406	SETDB2	100	66.572	Ursus_maritimus
MGP_CAROLIEiJ_G0019367	Setdb2	100	61.885	ENSVPAG00000012019	SETDB2	100	61.885	Vicugna_pacos
MGP_CAROLIEiJ_G0019367	Setdb2	85	60.631	ENSVVUG00000028174	SETDB2	92	60.631	Vulpes_vulpes
MGP_CAROLIEiJ_G0019367	Setdb2	99	41.160	ENSXETG00000015666	setdb2	100	41.160	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019367	Setdb2	96	33.202	ENSXMAG00000006323	-	92	33.202	Xiphophorus_maculatus