EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019426 (Gene tree)
Gene ID: 110309801
Gene Symbol: Nuggc
Alias: Gm600|LOC239151|SLIP-GC
Full Name: nuclear GTPase%2C germinal center associated
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 51084 bases
Position: chr14:56748395-56799478
Accession: 110309801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0037145	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_CAROLIEiJ_P0037146	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0037145	-	2746	-	MGP_CAROLIEiJ_P0037145	796 (aa)	-	-
MGP_CAROLIEiJ_T0037146	-	2564	XM_021182542	MGP_CAROLIEiJ_P0037146	812 (aa)	XP_021038201	UPI000A31482D

Gene Model

Click here to download MGP_CAROLIEiJ_G0019426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019426	Nuggc	100	78.894	ENSG00000189233	NUGGC	100	78.894	Homo_sapiens
MGP_CAROLIEiJ_G0019426	Nuggc	62	31.434	ENSAPEG00000007463	-	74	31.631	Amphiprion_percula
MGP_CAROLIEiJ_G0019426	Nuggc	99	78.266	ENSBTAG00000011321	NUGGC	100	78.266	Bos_taurus
MGP_CAROLIEiJ_G0019426	Nuggc	100	77.638	ENSCJAG00000015456	NUGGC	100	77.638	Callithrix_jacchus
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.405	ENSCAFG00000008347	NUGGC	100	80.284	Canis_familiaris
MGP_CAROLIEiJ_G0019426	Nuggc	99	78.742	ENSCHIG00000016874	NUGGC	100	78.742	Capra_hircus
MGP_CAROLIEiJ_G0019426	Nuggc	97	79.279	ENSCAPG00000010505	NUGGC	99	79.279	Cavia_aperea
MGP_CAROLIEiJ_G0019426	Nuggc	99	78.894	ENSCPOG00000003741	NUGGC	100	78.894	Cavia_porcellus
MGP_CAROLIEiJ_G0019426	Nuggc	100	79.774	ENSCATG00000011556	NUGGC	100	79.774	Cercocebus_atys
MGP_CAROLIEiJ_G0019426	Nuggc	100	89.698	ENSCGRG00001024841	Nuggc	100	89.698	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019426	Nuggc	100	89.698	ENSCGRG00000012434	Nuggc	100	89.698	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019426	Nuggc	97	79.922	ENSEASG00005016323	NUGGC	99	79.922	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.227	ENSECAG00000014074	NUGGC	100	80.227	Equus_caballus
MGP_CAROLIEiJ_G0019426	Nuggc	79	30.016	ENSELUG00000016238	-	66	30.448	Esox_lucius
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.910	ENSFCAG00000002892	NUGGC	99	80.910	Felis_catus
MGP_CAROLIEiJ_G0019426	Nuggc	60	30.339	ENSGACG00000011412	-	74	30.556	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019426	Nuggc	98	80.438	ENSSTOG00000000498	NUGGC	99	80.438	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019426	Nuggc	100	79.271	ENSMFAG00000043857	NUGGC	100	79.271	Macaca_fascicularis
MGP_CAROLIEiJ_G0019426	Nuggc	100	79.146	ENSMMUG00000001040	NUGGC	100	79.146	Macaca_mulatta
MGP_CAROLIEiJ_G0019426	Nuggc	100	79.146	ENSMNEG00000045452	NUGGC	100	79.146	Macaca_nemestrina
MGP_CAROLIEiJ_G0019426	Nuggc	88	88.608	ENSMAUG00000014486	Nuggc	100	88.608	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019426	Nuggc	97	79.639	ENSMICG00000030884	NUGGC	98	79.537	Microcebus_murinus
MGP_CAROLIEiJ_G0019426	Nuggc	100	96.552	ENSMUSG00000061356	Nuggc	100	96.552	Mus_musculus
MGP_CAROLIEiJ_G0019426	Nuggc	98	80.848	ENSMPUG00000000959	NUGGC	98	80.848	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019426	Nuggc	100	82.789	ENSNGAG00000022052	Nuggc	100	82.789	Nannospalax_galili
MGP_CAROLIEiJ_G0019426	Nuggc	99	75.662	ENSOCUG00000000032	NUGGC	99	75.662	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019426	Nuggc	97	78.266	ENSOGAG00000000229	NUGGC	99	78.266	Otolemur_garnettii
MGP_CAROLIEiJ_G0019426	Nuggc	99	79.040	ENSOARG00000014887	NUGGC	99	79.040	Ovis_aries
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.784	ENSPPRG00000012192	NUGGC	99	80.784	Panthera_pardus
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.910	ENSPTIG00000008187	NUGGC	99	80.910	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019426	Nuggc	65	30.057	ENSPREG00000007347	-	88	30.435	Poecilia_reticulata
MGP_CAROLIEiJ_G0019426	Nuggc	91	81.272	ENSRBIG00000043902	NUGGC	100	81.272	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019426	Nuggc	91	78.445	ENSSBOG00000028930	NUGGC	100	78.445	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019426	Nuggc	53	30.000	ENSSDUG00000010293	-	69	30.000	Seriola_dumerili
MGP_CAROLIEiJ_G0019426	Nuggc	77	31.260	ENSSPAG00000014020	-	77	31.260	Stegastes_partitus
MGP_CAROLIEiJ_G0019426	Nuggc	99	77.987	ENSTTRG00000015905	NUGGC	99	77.987	Tursiops_truncatus
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.657	ENSUAMG00000013467	NUGGC	99	80.657	Ursus_americanus
MGP_CAROLIEiJ_G0019426	Nuggc	99	80.177	ENSVVUG00000003454	NUGGC	99	80.051	Vulpes_vulpes