EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019512 (Gene tree)
Gene ID: 110309376
Gene Symbol: Zc3h13
Alias: 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 60588 bases
Position: chr14:66180040-66240627
Accession: 110309376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0037412	zf-CCCH	PF00642.24	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0037413	-	5888	-	MGP_CAROLIEiJ_P0037413	1738 (aa)	-	UPI000A3180E8
MGP_CAROLIEiJ_T0037412	-	6177	XM_021181995	MGP_CAROLIEiJ_P0037412	1737 (aa)	XP_021037654	UPI000A3184C6

Gene Model

Click here to download MGP_CAROLIEiJ_G0019512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.248	ENSG00000123200	ZC3H13	98	93.805	Homo_sapiens
MGP_CAROLIEiJ_G0019512	Zc3h13	59	75.189	ENSAPLG00000002707	ZC3H13	68	77.950	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019512	Zc3h13	50	82.971	ENSCAFG00000004511	ZC3H13	52	83.142	Canis_familiaris
MGP_CAROLIEiJ_G0019512	Zc3h13	50	82.991	ENSCAFG00020019269	ZC3H13	96	91.019	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019512	Zc3h13	50	79.263	ENSCHIG00000020072	ZC3H13	52	79.449	Capra_hircus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.791	ENSCCAG00000032728	ZC3H13	54	80.839	Cebus_capucinus
MGP_CAROLIEiJ_G0019512	Zc3h13	75	90.265	ENSCHOG00000009724	ZC3H13	56	90.265	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.664	ENSDNOG00000005390	ZC3H13	52	80.827	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	81.943	ENSEASG00005017100	ZC3H13	52	81.537	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019512	Zc3h13	64	86.508	ENSECAG00000022843	ZC3H13	53	82.225	Equus_caballus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	81.943	ENSFCAG00000004877	ZC3H13	52	82.225	Felis_catus
MGP_CAROLIEiJ_G0019512	Zc3h13	63	69.847	ENSGACG00000015166	zc3h13	56	54.757	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019512	Zc3h13	79	92.927	ENSJJAG00000019971	Zc3h13	52	83.641	Jaculus_jaculus
MGP_CAROLIEiJ_G0019512	Zc3h13	59	87.140	ENSMLEG00000039387	ZC3H13	70	92.032	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019512	Zc3h13	100	98.274	ENSMUSG00000022000	Zc3h13	100	98.274	Mus_musculus
MGP_CAROLIEiJ_G0019512	Zc3h13	100	97.468	MGP_PahariEiJ_G0030530	Zc3h13	100	97.468	Mus_pahari
MGP_CAROLIEiJ_G0019512	Zc3h13	100	97.929	MGP_SPRETEiJ_G0020407	Zc3h13	100	98.044	Mus_spretus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.686	ENSMPUG00000001602	ZC3H13	51	81.881	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019512	Zc3h13	50	78.563	ENSMLUG00000006920	ZC3H13	52	78.899	Myotis_lucifugus
MGP_CAROLIEiJ_G0019512	Zc3h13	79	88.431	ENSODEG00000005178	ZC3H13	53	82.048	Octodon_degus
MGP_CAROLIEiJ_G0019512	Zc3h13	78	88.521	ENSOCUG00000015173	ZC3H13	52	83.890	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	78.917	ENSOARG00000007790	ZC3H13	52	75.648	Ovis_aries
MGP_CAROLIEiJ_G0019512	Zc3h13	50	82.286	ENSPPRG00000005440	ZC3H13	52	82.569	Panthera_pardus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.686	ENSPTIG00000014867	ZC3H13	53	80.963	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019512	Zc3h13	76	90.323	ENSPCAG00000001146	ZC3H13	65	91.791	Procavia_capensis
MGP_CAROLIEiJ_G0019512	Zc3h13	67	88.701	ENSPVAG00000012353	ZC3H13	69	87.407	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	94.476	ENSRNOG00000011237	Zc3h13	50	94.476	Rattus_norvegicus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.248	ENSRBIG00000010463	ZC3H13	53	80.408	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.158	ENSSBOG00000027228	ZC3H13	53	80.204	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019512	Zc3h13	50	81.286	ENSSSCG00000009414	ZC3H13	52	81.567	Sus_scrofa
MGP_CAROLIEiJ_G0019512	Zc3h13	79	81.618	ENSTTRG00000003611	ZC3H13	84	81.336	Tursiops_truncatus
MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.114	ENSUMAG00000016220	ZC3H13	52	79.931	Ursus_maritimus
MGP_CAROLIEiJ_G0019512	Zc3h13	84	90.909	ENSVPAG00000005179	ZC3H13	53	91.150	Vicugna_pacos
MGP_CAROLIEiJ_G0019512	Zc3h13	79	89.341	ENSVVUG00000028395	ZC3H13	86	88.566	Vulpes_vulpes
MGP_CAROLIEiJ_G0019512	Zc3h13	50	52.018	ENSXETG00000014637	zc3h13	79	57.858	Xenopus_tropicalis