EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019618 (Gene tree)
Gene ID: 110309871
Gene Symbol: Pcca
Alias: C79630
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 330655 bases
Position: chr14:111618409-111949063
Accession: 110309871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0037674	RimK	PF08443.11	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0037685	-	564	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037673	-	431	-	MGP_CAROLIEiJ_P0037673	131 (aa)	-	-
MGP_CAROLIEiJ_T0037672	-	692	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037677	-	534	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037676	-	967	-	MGP_CAROLIEiJ_P0037676	182 (aa)	-	-
MGP_CAROLIEiJ_T0037675	-	512	-	MGP_CAROLIEiJ_P0037675	163 (aa)	-	-
MGP_CAROLIEiJ_T0037674	-	2593	XM_021182607	MGP_CAROLIEiJ_P0037674	724 (aa)	XP_021038266	UPI000A317393
MGP_CAROLIEiJ_T0037679	-	1268	-	MGP_CAROLIEiJ_P0037679	166 (aa)	-	UPI00024677C8
MGP_CAROLIEiJ_T0037678	-	322	-	MGP_CAROLIEiJ_P0037678	34 (aa)	-	-
MGP_CAROLIEiJ_T0037682	-	514	-	MGP_CAROLIEiJ_P0037682	85 (aa)	-	-
MGP_CAROLIEiJ_T0037684	-	1885	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037680	-	287	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037681	-	597	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0019618	Pcca	92	40.117	MGP_CAROLIEiJ_G0024932	Mccc1	93	40.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019618	Pcca	100	89.148	ENSG00000175198	PCCA	99	93.968	Homo_sapiens
MGP_CAROLIEiJ_G0019618	Pcca	89	76.398	ENSAPOG00000002389	pcca	100	76.398	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019618	Pcca	87	91.930	ENSAMEG00000016627	PCCA	99	91.930	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019618	Pcca	85	80.392	ENSACIG00000015913	PCCA	98	80.392	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019618	Pcca	97	75.571	ENSAOCG00000005451	pcca	98	75.571	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019618	Pcca	97	75.823	ENSAPEG00000002955	pcca	98	75.823	Amphiprion_percula
MGP_CAROLIEiJ_G0019618	Pcca	98	74.294	ENSATEG00000004273	pcca	99	74.294	Anabas_testudineus
MGP_CAROLIEiJ_G0019618	Pcca	94	84.840	ENSAPLG00000002609	PCCA	99	84.840	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019618	Pcca	100	84.362	ENSANAG00000031162	PCCA	94	92.063	Aotus_nancymaae
MGP_CAROLIEiJ_G0019618	Pcca	98	75.424	ENSACLG00000006725	pcca	98	75.424	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019618	Pcca	100	86.505	ENSBTAG00000010672	PCCA	100	86.505	Bos_taurus
MGP_CAROLIEiJ_G0019618	Pcca	100	88.324	ENSCJAG00000020998	PCCA	100	88.324	Callithrix_jacchus
MGP_CAROLIEiJ_G0019618	Pcca	100	88.782	ENSCAFG00000005838	PCCA	100	88.782	Canis_familiaris
MGP_CAROLIEiJ_G0019618	Pcca	100	88.782	ENSCAFG00020022683	PCCA	100	88.782	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019618	Pcca	100	87.397	ENSCHIG00000007335	PCCA	100	87.397	Capra_hircus
MGP_CAROLIEiJ_G0019618	Pcca	96	91.053	ENSTSYG00000000053	PCCA	95	92.354	Carlito_syrichta
MGP_CAROLIEiJ_G0019618	Pcca	100	89.423	ENSCPOG00000011274	PCCA	100	89.423	Cavia_porcellus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.011	ENSCCAG00000022253	PCCA	100	89.011	Cebus_capucinus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.148	ENSCATG00000034177	PCCA	100	89.148	Cercocebus_atys
MGP_CAROLIEiJ_G0019618	Pcca	100	91.621	ENSCLAG00000003205	PCCA	100	91.621	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019618	Pcca	100	89.423	ENSCSAG00000017493	PCCA	100	89.423	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019618	Pcca	86	84.825	ENSCHOG00000000247	PCCA	90	84.825	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019618	Pcca	98	82.037	ENSCPBG00000018046	PCCA	98	82.516	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019618	Pcca	92	65.230	ENSCING00000008081	-	95	65.230	Ciona_intestinalis
MGP_CAROLIEiJ_G0019618	Pcca	93	62.555	ENSCSAVG00000011361	-	99	63.338	Ciona_savignyi
MGP_CAROLIEiJ_G0019618	Pcca	100	88.736	ENSCANG00000013062	PCCA	100	88.736	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019618	Pcca	100	92.541	ENSCGRG00001015819	Pcca	100	92.541	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019618	Pcca	97	92.908	ENSCGRG00000014796	Pcca	100	91.160	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019618	Pcca	97	73.969	ENSCSEG00000016645	pcca	99	73.969	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019618	Pcca	86	77.564	ENSCVAG00000010430	pcca	95	84.510	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019618	Pcca	100	87.775	ENSDNOG00000042384	PCCA	100	90.528	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019618	Pcca	100	76.871	ENSDORG00000012949	Pcca	100	76.871	Dipodomys_ordii
MGP_CAROLIEiJ_G0019618	Pcca	98	90.884	ENSEASG00005022166	PCCA	100	90.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019618	Pcca	98	90.884	ENSECAG00000018952	PCCA	100	89.863	Equus_caballus
MGP_CAROLIEiJ_G0019618	Pcca	91	76.818	ENSELUG00000002383	pcca	100	76.818	Esox_lucius
MGP_CAROLIEiJ_G0019618	Pcca	100	89.863	ENSFCAG00000012573	PCCA	100	89.863	Felis_catus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.698	ENSFDAG00000005817	PCCA	97	89.698	Fukomys_damarensis
MGP_CAROLIEiJ_G0019618	Pcca	97	75.714	ENSFHEG00000011811	pcca	98	75.714	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019618	Pcca	97	75.429	ENSGAFG00000011218	pcca	98	75.429	Gambusia_affinis
MGP_CAROLIEiJ_G0019618	Pcca	90	77.231	ENSGACG00000002342	pcca	100	77.231	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019618	Pcca	87	84.127	ENSGAGG00000010472	PCCA	95	84.127	Gopherus_agassizii
MGP_CAROLIEiJ_G0019618	Pcca	100	89.560	ENSGGOG00000012516	PCCA	100	89.560	Gorilla_gorilla
MGP_CAROLIEiJ_G0019618	Pcca	100	89.560	ENSHGLG00000011057	PCCA	100	89.560	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019618	Pcca	100	89.560	ENSHGLG00100001468	PCCA	100	89.560	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019618	Pcca	97	74.678	ENSHCOG00000016098	pcca	100	75.621	Hippocampus_comes
MGP_CAROLIEiJ_G0019618	Pcca	96	92.496	ENSSTOG00000021045	PCCA	100	92.496	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.227	ENSJJAG00000011150	Pcca	100	89.227	Jaculus_jaculus
MGP_CAROLIEiJ_G0019618	Pcca	96	76.403	ENSKMAG00000014632	pcca	98	76.109	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019618	Pcca	89	84.006	ENSLACG00000012828	PCCA	100	84.006	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019618	Pcca	92	89.521	ENSLAFG00000014958	PCCA	100	89.521	Loxodonta_africana
MGP_CAROLIEiJ_G0019618	Pcca	100	89.286	ENSMFAG00000020427	PCCA	100	89.286	Macaca_fascicularis
MGP_CAROLIEiJ_G0019618	Pcca	100	89.286	ENSMMUG00000004493	PCCA	100	89.286	Macaca_mulatta
MGP_CAROLIEiJ_G0019618	Pcca	100	89.148	ENSMNEG00000045261	PCCA	100	89.148	Macaca_nemestrina
MGP_CAROLIEiJ_G0019618	Pcca	100	89.148	ENSMLEG00000033842	PCCA	100	89.148	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019618	Pcca	97	74.964	ENSMAMG00000009304	pcca	99	74.964	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019618	Pcca	98	75.424	ENSMZEG00005018487	pcca	98	75.424	Maylandia_zebra
MGP_CAROLIEiJ_G0019618	Pcca	57	89.952	ENSMGAG00000014892	PCCA	99	89.952	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019618	Pcca	100	86.188	ENSMAUG00000000626	Pcca	100	86.188	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019618	Pcca	68	87.576	ENSMICG00000038258	-	97	85.192	Microcebus_murinus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.698	ENSMICG00000010685	-	100	89.698	Microcebus_murinus
MGP_CAROLIEiJ_G0019618	Pcca	100	91.575	ENSMOCG00000015156	Pcca	100	91.575	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019618	Pcca	96	74.856	ENSMALG00000009947	pcca	100	75.000	Monopterus_albus
MGP_CAROLIEiJ_G0019618	Pcca	100	99.724	ENSMUSG00000041650	Pcca	100	99.724	Mus_musculus
MGP_CAROLIEiJ_G0019618	Pcca	100	99.033	MGP_PahariEiJ_G0030634	Pcca	100	99.033	Mus_pahari
MGP_CAROLIEiJ_G0019618	Pcca	100	99.586	MGP_SPRETEiJ_G0020515	Pcca	100	99.586	Mus_spretus
MGP_CAROLIEiJ_G0019618	Pcca	94	91.971	ENSMPUG00000011333	PCCA	100	91.971	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019618	Pcca	80	87.713	ENSMLUG00000005729	PCCA	99	87.713	Myotis_lucifugus
MGP_CAROLIEiJ_G0019618	Pcca	100	86.795	ENSNGAG00000016528	Pcca	100	87.070	Nannospalax_galili
MGP_CAROLIEiJ_G0019618	Pcca	68	74.545	ENSNBRG00000019075	pcca	92	74.545	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019618	Pcca	100	87.049	ENSODEG00000010667	PCCA	100	87.049	Octodon_degus
MGP_CAROLIEiJ_G0019618	Pcca	98	75.565	ENSONIG00000013151	pcca	98	75.565	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019618	Pcca	90	89.939	ENSOCUG00000017230	PCCA	96	89.939	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019618	Pcca	97	73.400	ENSORLG00000000361	pcca	98	73.400	Oryzias_latipes
MGP_CAROLIEiJ_G0019618	Pcca	97	73.684	ENSORLG00020005749	pcca	98	73.684	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019618	Pcca	97	73.759	ENSORLG00015012738	pcca	98	73.759	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019618	Pcca	97	74.074	ENSOMEG00000001912	pcca	98	74.074	Oryzias_melastigma
MGP_CAROLIEiJ_G0019618	Pcca	100	88.324	ENSOGAG00000017088	PCCA	100	88.324	Otolemur_garnettii
MGP_CAROLIEiJ_G0019618	Pcca	89	91.022	ENSOARG00000004442	PCCA	100	91.022	Ovis_aries
MGP_CAROLIEiJ_G0019618	Pcca	100	89.286	ENSPPAG00000036841	PCCA	100	89.286	Pan_paniscus
MGP_CAROLIEiJ_G0019618	Pcca	100	89.863	ENSPPRG00000006626	PCCA	100	89.863	Panthera_pardus
MGP_CAROLIEiJ_G0019618	Pcca	87	92.857	ENSPTIG00000009732	PCCA	100	92.857	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019618	Pcca	100	89.423	ENSPTRG00000006001	PCCA	100	89.423	Pan_troglodytes
MGP_CAROLIEiJ_G0019618	Pcca	97	78.745	ENSPKIG00000004765	pcca	99	78.745	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019618	Pcca	89	83.385	ENSPSIG00000009154	PCCA	100	83.385	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019618	Pcca	100	92.818	ENSPEMG00000009083	Pcca	100	92.818	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019618	Pcca	100	79.533	ENSPCIG00000027261	PCCA	100	79.808	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019618	Pcca	97	75.143	ENSPFOG00000014855	pcca	98	75.143	Poecilia_formosa
MGP_CAROLIEiJ_G0019618	Pcca	97	75.143	ENSPLAG00000016583	pcca	98	75.143	Poecilia_latipinna
MGP_CAROLIEiJ_G0019618	Pcca	97	75.000	ENSPMEG00000011613	pcca	98	75.000	Poecilia_mexicana
MGP_CAROLIEiJ_G0019618	Pcca	91	76.560	ENSPREG00000007537	pcca	100	76.560	Poecilia_reticulata
MGP_CAROLIEiJ_G0019618	Pcca	100	88.874	ENSPPYG00000005473	PCCA	100	88.874	Pongo_abelii
MGP_CAROLIEiJ_G0019618	Pcca	100	87.775	ENSPCOG00000015321	PCCA	100	87.775	Propithecus_coquereli
MGP_CAROLIEiJ_G0019618	Pcca	91	76.284	ENSPNYG00000008226	pcca	100	76.284	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019618	Pcca	97	76.605	ENSPNAG00000011078	pcca	99	76.605	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019618	Pcca	100	89.011	ENSRROG00000030936	PCCA	100	89.011	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019618	Pcca	100	89.423	ENSSBOG00000020005	PCCA	100	89.423	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019618	Pcca	97	79.030	ENSSFOG00015021986	pcca	99	79.030	Scleropages_formosus
MGP_CAROLIEiJ_G0019618	Pcca	89	77.174	ENSSMAG00000018126	pcca	100	77.174	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019618	Pcca	98	75.989	ENSSDUG00000021326	pcca	99	75.989	Seriola_dumerili
MGP_CAROLIEiJ_G0019618	Pcca	98	75.989	ENSSLDG00000016568	pcca	99	75.989	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019618	Pcca	87	82.484	ENSSPUG00000006036	PCCA	96	82.166	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019618	Pcca	94	72.794	ENSSPAG00000022191	pcca	93	72.794	Stegastes_partitus
MGP_CAROLIEiJ_G0019618	Pcca	100	88.219	ENSSSCG00000009522	PCCA	100	88.219	Sus_scrofa
MGP_CAROLIEiJ_G0019618	Pcca	95	81.368	ENSTGUG00000010915	PCCA	100	81.159	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019618	Pcca	98	74.859	ENSTRUG00000004990	pcca	99	74.859	Takifugu_rubripes
MGP_CAROLIEiJ_G0019618	Pcca	100	86.749	ENSTTRG00000002569	PCCA	100	86.749	Tursiops_truncatus
MGP_CAROLIEiJ_G0019618	Pcca	97	87.732	ENSUMAG00000023453	PCCA	100	92.415	Ursus_maritimus
MGP_CAROLIEiJ_G0019618	Pcca	100	88.646	ENSVVUG00000013550	PCCA	100	91.254	Vulpes_vulpes
MGP_CAROLIEiJ_G0019618	Pcca	91	77.169	ENSXCOG00000014159	pcca	100	77.169	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019618	Pcca	97	75.571	ENSXMAG00000014869	pcca	98	75.571	Xiphophorus_maculatus