EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019664 (Gene tree)
Gene ID: 110310645
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 24507 bases
Position: chr15:6853006-6877512
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0037863	zf-met	PF12874.7	2.8e-08	1	1
MGP_CAROLIEiJ_P0037863	zf-C2H2_jaz	PF12171.8	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0037862	-	1956	-	MGP_CAROLIEiJ_P0037862	491 (aa)	-	-
MGP_CAROLIEiJ_T0037863	-	1455	-	MGP_CAROLIEiJ_P0037863	381 (aa)	-	-
MGP_CAROLIEiJ_T0037866	-	2783	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037864	-	969	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0037865	-	607	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSG00000168724	DNAJC21	91	84.252	Homo_sapiens
MGP_CAROLIEiJ_G0019664	-	67	68.664	ENSAPOG00000020475	dnajc21	51	69.697	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSAMEG00000003283	DNAJC21	71	83.990	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019664	-	64	70.952	ENSACIG00000016953	dnajc21	51	74.346	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019664	-	96	53.333	ENSAOCG00000014500	dnajc21	62	65.079	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019664	-	55	71.163	ENSAPEG00000017159	dnajc21	71	54.386	Amphiprion_percula
MGP_CAROLIEiJ_G0019664	-	100	63.077	ENSAPLG00000006757	DNAJC21	75	63.520	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019664	-	100	60.914	ENSACAG00000021095	DNAJC21	72	61.637	Anolis_carolinensis
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSANAG00000029512	DNAJC21	71	84.514	Aotus_nancymaae
MGP_CAROLIEiJ_G0019664	-	95	56.522	ENSACLG00000005203	dnajc21	71	54.386	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019664	-	99	52.430	ENSAMXG00000008099	dnajc21	71	52.956	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019664	-	100	82.940	ENSBTAG00000015648	DNAJC21	62	82.940	Bos_taurus
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSCJAG00000018495	DNAJC21	74	75.529	Callithrix_jacchus
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSCAFG00000018794	DNAJC21	71	83.727	Canis_familiaris
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSCAFG00020016768	-	71	83.727	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019664	-	72	71.841	ENSCAFG00020005023	-	95	70.609	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSCHIG00000012397	DNAJC21	71	83.727	Capra_hircus
MGP_CAROLIEiJ_G0019664	-	100	83.161	ENSTSYG00000006288	DNAJC21	72	83.679	Carlito_syrichta
MGP_CAROLIEiJ_G0019664	-	100	84.514	ENSCCAG00000038110	DNAJC21	71	85.039	Cebus_capucinus
MGP_CAROLIEiJ_G0019664	-	100	75.622	ENSCATG00000029357	DNAJC21	73	76.119	Cercocebus_atys
MGP_CAROLIEiJ_G0019664	-	100	82.677	ENSCLAG00000011176	DNAJC21	76	82.677	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSCSAG00000017112	DNAJC21	71	84.514	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019664	-	93	72.180	ENSCHOG00000001798	DNAJC21	77	72.180	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019664	-	100	67.179	ENSCPBG00000021311	DNAJC21	69	67.436	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSCANG00000009741	DNAJC21	71	84.252	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019664	-	100	89.501	ENSCGRG00001020440	Dnajc21	62	89.501	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019664	-	100	89.501	ENSCGRG00000008326	Dnajc21	68	89.501	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019664	-	97	49.474	ENSCSEG00000019817	dnajc21	71	51.145	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019664	-	100	53.690	ENSCVAG00000016740	dnajc21	71	54.250	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019664	-	100	80.052	ENSDNOG00000041523	DNAJC21	72	80.577	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019664	-	100	84.073	ENSDORG00000009370	Dnajc21	72	84.334	Dipodomys_ordii
MGP_CAROLIEiJ_G0019664	-	100	82.677	ENSEASG00005014955	DNAJC21	71	83.202	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019664	-	100	82.940	ENSECAG00000024728	DNAJC21	56	83.465	Equus_caballus
MGP_CAROLIEiJ_G0019664	-	100	80.840	ENSEEUG00000012676	DNAJC21	76	80.840	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019664	-	96	52.567	ENSELUG00000009111	dnajc21	73	53.664	Esox_lucius
MGP_CAROLIEiJ_G0019664	-	100	82.940	ENSFCAG00000029775	DNAJC21	71	82.940	Felis_catus
MGP_CAROLIEiJ_G0019664	-	100	63.753	ENSFALG00000002105	DNAJC21	75	61.954	Ficedula_albicollis
MGP_CAROLIEiJ_G0019664	-	100	83.508	ENSFDAG00000013492	DNAJC21	72	84.031	Fukomys_damarensis
MGP_CAROLIEiJ_G0019664	-	100	50.900	ENSFHEG00000004599	dnajc21	72	53.598	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019664	-	100	50.250	ENSGAFG00000011978	dnajc21	71	56.853	Gambusia_affinis
MGP_CAROLIEiJ_G0019664	-	95	53.298	ENSGACG00000016480	dnajc21	73	52.261	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019664	-	100	66.838	ENSGAGG00000011966	DNAJC21	72	67.352	Gopherus_agassizii
MGP_CAROLIEiJ_G0019664	-	100	81.218	ENSGGOG00000024744	DNAJC21	72	81.472	Gorilla_gorilla
MGP_CAROLIEiJ_G0019664	-	95	56.522	ENSHBUG00000017885	dnajc21	71	54.887	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019664	-	94	69.081	ENSHGLG00000006827	-	71	68.241	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019664	-	100	83.202	ENSHGLG00000003933	-	71	83.727	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019664	-	100	83.202	ENSHGLG00100002047	DNAJC21	76	83.727	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019664	-	99	52.835	ENSIPUG00000017629	dnajc21	70	54.177	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019664	-	100	77.690	ENSSTOG00000009616	DNAJC21	70	78.215	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019664	-	100	80.577	ENSJJAG00000019642	Dnajc21	75	80.577	Jaculus_jaculus
MGP_CAROLIEiJ_G0019664	-	64	71.905	ENSKMAG00000014422	dnajc21	50	73.575	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019664	-	62	72.549	ENSLBEG00000018026	dnajc21	56	71.939	Labrus_bergylta
MGP_CAROLIEiJ_G0019664	-	97	56.915	ENSLACG00000005081	DNAJC21	70	57.292	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019664	-	100	47.952	ENSLOCG00000011784	dnajc21	71	50.611	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019664	-	78	77.027	ENSLAFG00000007251	-	100	77.027	Loxodonta_africana
MGP_CAROLIEiJ_G0019664	-	100	84.252	ENSMFAG00000001345	DNAJC21	71	84.777	Macaca_fascicularis
MGP_CAROLIEiJ_G0019664	-	100	83.727	ENSMMUG00000000446	DNAJC21	71	84.252	Macaca_mulatta
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSMNEG00000035975	DNAJC21	71	84.514	Macaca_nemestrina
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSMLEG00000011252	DNAJC21	72	84.514	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019664	-	55	71.296	ENSMAMG00000015040	dnajc21	72	52.605	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019664	-	95	56.522	ENSMZEG00005019816	dnajc21	71	54.386	Maylandia_zebra
MGP_CAROLIEiJ_G0019664	-	100	88.451	ENSMAUG00000009009	Dnajc21	71	88.451	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019664	-	100	85.039	ENSMICG00000005679	DNAJC21	71	85.039	Microcebus_murinus
MGP_CAROLIEiJ_G0019664	-	100	89.764	ENSMOCG00000011153	Dnajc21	76	89.764	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019664	-	74	60.748	ENSMMOG00000000864	dnajc21	66	45.337	Mola_mola
MGP_CAROLIEiJ_G0019664	-	100	71.990	ENSMODG00000020382	DNAJC21	71	72.775	Monodelphis_domestica
MGP_CAROLIEiJ_G0019664	-	66	69.907	ENSMALG00000020368	dnajc21	52	70.046	Monopterus_albus
MGP_CAROLIEiJ_G0019664	-	100	98.163	ENSMUSG00000044224	Dnajc21	71	98.163	Mus_musculus
MGP_CAROLIEiJ_G0019664	-	100	96.325	MGP_PahariEiJ_G0016044	Dnajc21	100	96.063	Mus_pahari
MGP_CAROLIEiJ_G0019664	-	100	95.538	MGP_SPRETEiJ_G0020561	Dnajc21	100	95.276	Mus_spretus
MGP_CAROLIEiJ_G0019664	-	100	83.465	ENSMPUG00000015133	DNAJC21	62	83.465	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019664	-	100	81.102	ENSMLUG00000000230	DNAJC21	76	81.102	Myotis_lucifugus
MGP_CAROLIEiJ_G0019664	-	100	85.302	ENSNGAG00000021213	Dnajc21	71	85.302	Nannospalax_galili
MGP_CAROLIEiJ_G0019664	-	96	81.744	ENSNLEG00000014463	DNAJC21	76	82.289	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019664	-	100	65.574	ENSOPRG00000012894	DNAJC21	66	82.743	Ochotona_princeps
MGP_CAROLIEiJ_G0019664	-	95	55.145	ENSONIG00000007724	dnajc21	71	54.887	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019664	-	100	67.677	ENSOANG00000014526	DNAJC21	76	68.687	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019664	-	100	85.827	ENSOCUG00000005257	DNAJC21	63	85.827	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019664	-	54	70.616	ENSORLG00000005913	dnajc21	71	48.700	Oryzias_latipes
MGP_CAROLIEiJ_G0019664	-	100	84.252	ENSOGAG00000001468	DNAJC21	71	84.777	Otolemur_garnettii
MGP_CAROLIEiJ_G0019664	-	100	83.465	ENSOARG00000011506	DNAJC21	71	83.465	Ovis_aries
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSPPAG00000042627	DNAJC21	73	84.514	Pan_paniscus
MGP_CAROLIEiJ_G0019664	-	100	82.940	ENSPPRG00000023534	DNAJC21	70	82.940	Panthera_pardus
MGP_CAROLIEiJ_G0019664	-	100	82.940	ENSPTIG00000002442	DNAJC21	70	82.940	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSPTRG00000016785	DNAJC21	71	84.514	Pan_troglodytes
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSPANG00000002427	DNAJC21	74	75.587	Papio_anubis
MGP_CAROLIEiJ_G0019664	-	95	55.200	ENSPKIG00000005946	dnajc21	71	50.125	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019664	-	100	90.289	ENSPEMG00000016806	Dnajc21	76	90.289	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019664	-	100	49.377	ENSPFOG00000008317	dnajc21	71	54.074	Poecilia_formosa
MGP_CAROLIEiJ_G0019664	-	100	48.878	ENSPLAG00000006826	dnajc21	71	52.854	Poecilia_latipinna
MGP_CAROLIEiJ_G0019664	-	100	49.377	ENSPMEG00000020264	dnajc21	71	54.315	Poecilia_mexicana
MGP_CAROLIEiJ_G0019664	-	100	49.000	ENSPREG00000017568	dnajc21	71	53.218	Poecilia_reticulata
MGP_CAROLIEiJ_G0019664	-	100	84.514	ENSPPYG00000015391	DNAJC21	61	85.039	Pongo_abelii
MGP_CAROLIEiJ_G0019664	-	100	80.315	ENSPCOG00000019875	DNAJC21	71	80.840	Propithecus_coquereli
MGP_CAROLIEiJ_G0019664	-	100	72.406	ENSPVAG00000013255	DNAJC21	78	75.236	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019664	-	95	56.522	ENSPNYG00000007690	dnajc21	71	54.887	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019664	-	99	52.658	ENSPNAG00000023349	dnajc21	71	55.025	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019664	-	100	92.388	ENSRNOG00000017876	Dnajc21	71	92.388	Rattus_norvegicus
MGP_CAROLIEiJ_G0019664	-	100	79.003	ENSRBIG00000034952	DNAJC21	70	79.319	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019664	-	100	82.677	ENSRROG00000037577	DNAJC21	71	83.202	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019664	-	100	83.202	ENSSBOG00000035312	-	76	83.727	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019664	-	100	72.585	ENSSHAG00000010525	DNAJC21	72	72.585	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019664	-	66	71.782	ENSSFOG00015022418	dnajc21	51	71.354	Scleropages_formosus
MGP_CAROLIEiJ_G0019664	-	93	55.405	ENSSMAG00000005935	dnajc21	71	56.171	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019664	-	55	69.725	ENSSDUG00000016254	dnajc21	72	51.493	Seriola_dumerili
MGP_CAROLIEiJ_G0019664	-	55	69.725	ENSSLDG00000007020	dnajc21	72	54.229	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019664	-	70	78.462	ENSSARG00000009903	-	81	78.462	Sorex_araneus
MGP_CAROLIEiJ_G0019664	-	96	61.968	ENSTGUG00000001971	DNAJC21	71	61.954	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019664	-	67	71.028	ENSTRUG00000011587	dnajc21	69	50.125	Takifugu_rubripes
MGP_CAROLIEiJ_G0019664	-	53	74.146	ENSTNIG00000007518	dnajc21	70	54.684	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019664	-	75	69.069	ENSTBEG00000011821	DNAJC21	64	69.670	Tupaia_belangeri
MGP_CAROLIEiJ_G0019664	-	100	74.224	ENSTTRG00000003250	DNAJC21	73	74.224	Tursiops_truncatus
MGP_CAROLIEiJ_G0019664	-	100	82.677	ENSUAMG00000022482	DNAJC21	91	82.677	Ursus_americanus
MGP_CAROLIEiJ_G0019664	-	100	80.840	ENSUMAG00000012891	DNAJC21	75	80.840	Ursus_maritimus
MGP_CAROLIEiJ_G0019664	-	100	73.239	ENSVPAG00000010130	DNAJC21	78	73.709	Vicugna_pacos
MGP_CAROLIEiJ_G0019664	-	100	83.990	ENSVVUG00000022084	-	74	83.990	Vulpes_vulpes
MGP_CAROLIEiJ_G0019664	-	72	70.909	ENSVVUG00000002401	-	97	69.818	Vulpes_vulpes
MGP_CAROLIEiJ_G0019664	-	100	56.522	ENSXETG00000000706	dnajc21	72	56.154	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019664	-	100	50.374	ENSXMAG00000004317	dnajc21	71	53.580	Xiphophorus_maculatus