EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019726 (Gene tree)
Gene ID: 110310552
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 35361 bases
Position: chr15:29446715-29482075
Accession: 110310552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038032	POP1	PF06978.11	1e-38	1	2
MGP_CAROLIEiJ_P0038032	POP1	PF06978.11	1e-38	2	2
MGP_CAROLIEiJ_P0038031	POP1	PF06978.11	1.1e-38	1	2
MGP_CAROLIEiJ_P0038031	POP1	PF06978.11	1.1e-38	2	2
MGP_CAROLIEiJ_P0038032	POPLD	PF08170.12	1e-26	1	1
MGP_CAROLIEiJ_P0038031	POPLD	PF08170.12	1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038034	-	472	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038035	-	794	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038036	-	522	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038031	-	3396	-	MGP_CAROLIEiJ_P0038031	1045 (aa)	-	-
MGP_CAROLIEiJ_T0038032	-	3276	XM_021183600	MGP_CAROLIEiJ_P0038032	1015 (aa)	XP_021039259	UPI000A31676B
MGP_CAROLIEiJ_T0038033	-	405	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019726	Pop1	100	76.758	ENSG00000104356	POP1	100	85.792	Homo_sapiens
MGP_CAROLIEiJ_G0019726	Pop1	100	46.242	ENSAPOG00000008198	pop1	100	45.463	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019726	Pop1	100	71.604	ENSAMEG00000000556	POP1	100	71.604	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019726	Pop1	100	46.146	ENSACIG00000004169	POP1	100	45.954	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019726	Pop1	100	45.636	ENSAOCG00000010991	pop1	100	45.515	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019726	Pop1	95	42.815	ENSAPEG00000007607	pop1	99	44.489	Amphiprion_percula
MGP_CAROLIEiJ_G0019726	Pop1	100	44.939	ENSATEG00000024814	POP1	100	45.014	Anabas_testudineus
MGP_CAROLIEiJ_G0019726	Pop1	92	59.405	ENSAPLG00000014418	POP1	99	59.029	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019726	Pop1	99	53.967	ENSACAG00000016083	POP1	100	53.913	Anolis_carolinensis
MGP_CAROLIEiJ_G0019726	Pop1	89	85.714	ENSANAG00000026360	POP1	99	85.714	Aotus_nancymaae
MGP_CAROLIEiJ_G0019726	Pop1	100	46.534	ENSACLG00000010951	pop1	100	46.445	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019726	Pop1	100	45.471	ENSAMXG00000014483	POP1	100	45.188	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019726	Pop1	100	72.923	ENSBTAG00000012596	POP1	100	72.923	Bos_taurus
MGP_CAROLIEiJ_G0019726	Pop1	100	75.781	ENSCJAG00000015567	POP1	100	75.781	Callithrix_jacchus
MGP_CAROLIEiJ_G0019726	Pop1	100	72.620	ENSCAFG00000000469	POP1	100	72.620	Canis_familiaris
MGP_CAROLIEiJ_G0019726	Pop1	100	73.047	ENSCAFG00020026765	POP1	100	73.047	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019726	Pop1	100	72.407	ENSCHIG00000017066	POP1	100	72.603	Capra_hircus
MGP_CAROLIEiJ_G0019726	Pop1	100	75.488	ENSTSYG00000003097	POP1	100	75.488	Carlito_syrichta
MGP_CAROLIEiJ_G0019726	Pop1	100	72.125	ENSCAPG00000007251	POP1	100	71.762	Cavia_aperea
MGP_CAROLIEiJ_G0019726	Pop1	100	74.339	ENSCPOG00000002901	POP1	100	73.973	Cavia_porcellus
MGP_CAROLIEiJ_G0019726	Pop1	100	75.684	ENSCCAG00000018939	POP1	100	75.684	Cebus_capucinus
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSCATG00000040916	POP1	100	76.367	Cercocebus_atys
MGP_CAROLIEiJ_G0019726	Pop1	100	76.983	ENSCLAG00000007208	POP1	97	76.983	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019726	Pop1	90	76.247	ENSCSAG00000012340	POP1	99	76.247	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019726	Pop1	88	80.550	ENSCHOG00000011432	POP1	96	80.550	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019726	Pop1	100	61.328	ENSCPBG00000006373	POP1	100	61.719	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019726	Pop1	83	36.965	ENSCING00000008323	-	88	36.965	Ciona_intestinalis
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSCANG00000001647	POP1	100	76.367	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019726	Pop1	100	84.154	ENSCGRG00001017308	Pop1	100	84.154	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019726	Pop1	100	78.051	ENSCGRG00000010824	Pop1	100	78.051	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019726	Pop1	100	43.810	ENSCSEG00000008737	POP1	100	43.619	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019726	Pop1	100	45.341	ENSCVAG00000022248	pop1	100	45.341	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019726	Pop1	52	45.265	ENSDARG00000102087	pop1	99	45.265	Danio_rerio
MGP_CAROLIEiJ_G0019726	Pop1	100	71.469	ENSDNOG00000019974	POP1	100	71.469	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019726	Pop1	100	67.871	ENSDORG00000015384	Pop1	100	67.457	Dipodomys_ordii
MGP_CAROLIEiJ_G0019726	Pop1	61	33.488	FBgn0026702	l(1)G0045	70	33.385	Drosophila_melanogaster
MGP_CAROLIEiJ_G0019726	Pop1	89	67.895	ENSETEG00000007839	POP1	88	67.895	Echinops_telfairi
MGP_CAROLIEiJ_G0019726	Pop1	100	75.000	ENSEASG00005003189	POP1	98	75.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019726	Pop1	100	74.902	ENSECAG00000024236	POP1	100	74.902	Equus_caballus
MGP_CAROLIEiJ_G0019726	Pop1	67	66.300	ENSEEUG00000003050	-	70	66.300	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019726	Pop1	100	45.245	ENSELUG00000003526	pop1	100	45.568	Esox_lucius
MGP_CAROLIEiJ_G0019726	Pop1	100	74.437	ENSFCAG00000002168	POP1	100	74.437	Felis_catus
MGP_CAROLIEiJ_G0019726	Pop1	100	56.335	ENSFALG00000005711	POP1	100	55.977	Ficedula_albicollis
MGP_CAROLIEiJ_G0019726	Pop1	100	76.200	ENSFDAG00000017068	POP1	100	76.200	Fukomys_damarensis
MGP_CAROLIEiJ_G0019726	Pop1	100	45.881	ENSFHEG00000019518	pop1	100	45.829	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019726	Pop1	92	45.155	ENSGMOG00000000659	POP1	97	45.361	Gadus_morhua
MGP_CAROLIEiJ_G0019726	Pop1	100	44.691	ENSGAFG00000019770	POP1	100	44.744	Gambusia_affinis
MGP_CAROLIEiJ_G0019726	Pop1	100	43.846	ENSGACG00000003499	pop1	100	43.846	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019726	Pop1	100	60.794	ENSGAGG00000011737	POP1	98	61.089	Gopherus_agassizii
MGP_CAROLIEiJ_G0019726	Pop1	100	76.465	ENSGGOG00000003176	POP1	100	76.465	Gorilla_gorilla
MGP_CAROLIEiJ_G0019726	Pop1	100	46.730	ENSHBUG00000021583	pop1	100	46.540	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019726	Pop1	100	75.464	ENSHGLG00000006029	POP1	100	75.464	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019726	Pop1	100	75.464	ENSHGLG00100016879	POP1	100	75.464	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019726	Pop1	90	48.116	ENSHCOG00000013888	pop1	96	47.503	Hippocampus_comes
MGP_CAROLIEiJ_G0019726	Pop1	100	44.546	ENSIPUG00000018336	pop1	100	43.454	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019726	Pop1	100	77.375	ENSSTOG00000011455	POP1	97	77.375	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019726	Pop1	100	75.320	ENSJJAG00000013325	Pop1	100	75.320	Jaculus_jaculus
MGP_CAROLIEiJ_G0019726	Pop1	100	43.989	ENSKMAG00000001346	POP1	100	43.989	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019726	Pop1	89	46.278	ENSLBEG00000024457	POP1	95	45.869	Labrus_bergylta
MGP_CAROLIEiJ_G0019726	Pop1	93	55.746	ENSLACG00000012498	POP1	100	55.746	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019726	Pop1	100	50.484	ENSLOCG00000009817	POP1	100	50.533	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019726	Pop1	100	75.195	ENSLAFG00000010770	POP1	100	75.195	Loxodonta_africana
MGP_CAROLIEiJ_G0019726	Pop1	100	76.562	ENSMFAG00000000347	POP1	100	76.562	Macaca_fascicularis
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSMNEG00000036870	POP1	100	76.367	Macaca_nemestrina
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSMLEG00000034986	POP1	100	76.367	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019726	Pop1	100	44.508	ENSMAMG00000004040	pop1	100	45.118	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019726	Pop1	100	46.730	ENSMZEG00005025448	pop1	100	46.540	Maylandia_zebra
MGP_CAROLIEiJ_G0019726	Pop1	100	56.654	ENSMGAG00000012167	POP1	100	56.600	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019726	Pop1	100	83.381	ENSMAUG00000017537	Pop1	100	83.095	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019726	Pop1	100	76.540	ENSMICG00000004361	POP1	100	76.540	Microcebus_murinus
MGP_CAROLIEiJ_G0019726	Pop1	100	83.349	ENSMOCG00000006356	Pop1	100	83.828	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019726	Pop1	100	42.941	ENSMMOG00000018242	pop1	100	42.941	Mola_mola
MGP_CAROLIEiJ_G0019726	Pop1	100	63.198	ENSMODG00000006561	POP1	100	63.873	Monodelphis_domestica
MGP_CAROLIEiJ_G0019726	Pop1	100	45.829	ENSMALG00000012621	POP1	100	45.881	Monopterus_albus
MGP_CAROLIEiJ_G0019726	Pop1	100	97.608	ENSMUSG00000022325	Pop1	100	97.608	Mus_musculus
MGP_CAROLIEiJ_G0019726	Pop1	100	94.877	MGP_PahariEiJ_G0019735	Pop1	100	94.877	Mus_pahari
MGP_CAROLIEiJ_G0019726	Pop1	100	97.033	MGP_SPRETEiJ_G0020622	Pop1	100	97.033	Mus_spretus
MGP_CAROLIEiJ_G0019726	Pop1	100	73.346	ENSMPUG00000015250	POP1	100	73.346	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019726	Pop1	100	70.663	ENSMLUG00000010204	POP1	100	70.663	Myotis_lucifugus
MGP_CAROLIEiJ_G0019726	Pop1	100	81.747	ENSNGAG00000001582	Pop1	100	81.747	Nannospalax_galili
MGP_CAROLIEiJ_G0019726	Pop1	89	47.097	ENSNBRG00000002356	pop1	94	46.365	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019726	Pop1	100	76.270	ENSNLEG00000002541	POP1	100	76.270	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019726	Pop1	93	57.500	ENSMEUG00000003118	POP1	98	57.708	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019726	Pop1	100	73.190	ENSOPRG00000007667	POP1	100	73.190	Ochotona_princeps
MGP_CAROLIEiJ_G0019726	Pop1	100	74.780	ENSODEG00000003984	POP1	100	74.780	Octodon_degus
MGP_CAROLIEiJ_G0019726	Pop1	100	46.974	ENSONIG00000016445	pop1	100	46.968	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019726	Pop1	62	70.732	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019726	Pop1	100	73.398	ENSOCUG00000017400	POP1	100	73.398	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019726	Pop1	92	47.594	ENSORLG00000002839	pop1	100	46.006	Oryzias_latipes
MGP_CAROLIEiJ_G0019726	Pop1	90	46.588	ENSORLG00020022450	POP1	96	46.759	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019726	Pop1	92	47.912	ENSORLG00015012746	POP1	100	46.295	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019726	Pop1	100	46.667	ENSOMEG00000006915	pop1	99	46.266	Oryzias_melastigma
MGP_CAROLIEiJ_G0019726	Pop1	100	74.316	ENSOGAG00000001466	POP1	100	74.316	Otolemur_garnettii
MGP_CAROLIEiJ_G0019726	Pop1	100	76.562	ENSPPAG00000018410	POP1	100	76.562	Pan_paniscus
MGP_CAROLIEiJ_G0019726	Pop1	100	74.537	ENSPPRG00000005002	POP1	100	74.537	Panthera_pardus
MGP_CAROLIEiJ_G0019726	Pop1	100	74.732	ENSPTIG00000016527	POP1	100	74.732	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019726	Pop1	100	76.660	ENSPTRG00000020458	POP1	100	76.660	Pan_troglodytes
MGP_CAROLIEiJ_G0019726	Pop1	100	76.465	ENSPANG00000009704	POP1	100	76.465	Papio_anubis
MGP_CAROLIEiJ_G0019726	Pop1	100	48.505	ENSPKIG00000016325	POP1	100	48.604	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019726	Pop1	100	60.833	ENSPSIG00000012343	POP1	100	60.833	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019726	Pop1	90	48.701	ENSPMGG00000022253	POP1	95	47.785	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0019726	Pop1	99	84.880	ENSPEMG00000023633	Pop1	100	84.880	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019726	Pop1	90	44.421	ENSPMAG00000003209	POP1	100	44.480	Petromyzon_marinus
MGP_CAROLIEiJ_G0019726	Pop1	100	63.953	ENSPCIG00000012216	POP1	100	64.050	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019726	Pop1	100	45.377	ENSPFOG00000012490	POP1	100	44.877	Poecilia_formosa
MGP_CAROLIEiJ_G0019726	Pop1	100	45.229	ENSPLAG00000004646	POP1	100	44.729	Poecilia_latipinna
MGP_CAROLIEiJ_G0019726	Pop1	100	45.619	ENSPMEG00000019592	POP1	100	45.213	Poecilia_mexicana
MGP_CAROLIEiJ_G0019726	Pop1	100	45.134	ENSPREG00000020951	POP1	100	45.134	Poecilia_reticulata
MGP_CAROLIEiJ_G0019726	Pop1	100	76.074	ENSPPYG00000018777	POP1	100	76.074	Pongo_abelii
MGP_CAROLIEiJ_G0019726	Pop1	100	68.976	ENSPCAG00000016662	POP1	100	68.976	Procavia_capensis
MGP_CAROLIEiJ_G0019726	Pop1	100	76.540	ENSPCOG00000019420	POP1	100	76.540	Propithecus_coquereli
MGP_CAROLIEiJ_G0019726	Pop1	100	74.146	ENSPVAG00000014468	POP1	100	74.146	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019726	Pop1	89	47.363	ENSPNYG00000004476	pop1	95	47.391	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019726	Pop1	100	43.993	ENSPNAG00000000265	pop1	100	43.808	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019726	Pop1	100	91.196	ENSRNOG00000005243	Pop1	100	91.196	Rattus_norvegicus
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSRBIG00000007996	POP1	100	76.367	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	ENSRROG00000012334	POP1	100	76.367	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019726	Pop1	99	76.482	ENSSBOG00000020830	POP1	100	76.482	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019726	Pop1	100	64.007	ENSSHAG00000000296	POP1	100	63.358	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019726	Pop1	100	47.788	ENSSFOG00015007429	pop1	99	47.788	Scleropages_formosus
MGP_CAROLIEiJ_G0019726	Pop1	86	49.770	ENSSMAG00000010467	POP1	98	45.691	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019726	Pop1	100	45.498	ENSSDUG00000007817	POP1	100	45.024	Seriola_dumerili
MGP_CAROLIEiJ_G0019726	Pop1	100	44.962	ENSSLDG00000012565	POP1	100	45.308	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019726	Pop1	100	55.545	ENSSPUG00000003550	-	100	55.977	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019726	Pop1	90	47.078	ENSSPAG00000014955	pop1	94	47.147	Stegastes_partitus
MGP_CAROLIEiJ_G0019726	Pop1	100	74.216	ENSSSCG00000006078	POP1	100	74.216	Sus_scrofa
MGP_CAROLIEiJ_G0019726	Pop1	92	55.308	ENSTGUG00000012011	-	100	55.308	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019726	Pop1	91	46.709	ENSTRUG00000010856	pop1	94	46.504	Takifugu_rubripes
MGP_CAROLIEiJ_G0019726	Pop1	93	46.914	ENSTNIG00000013297	pop1	100	46.926	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019726	Pop1	95	72.643	ENSTBEG00000014214	POP1	99	72.643	Tupaia_belangeri
MGP_CAROLIEiJ_G0019726	Pop1	100	72.559	ENSTTRG00000016071	POP1	100	72.656	Tursiops_truncatus
MGP_CAROLIEiJ_G0019726	Pop1	99	70.089	ENSUAMG00000017309	POP1	100	70.089	Ursus_americanus
MGP_CAROLIEiJ_G0019726	Pop1	91	85.020	ENSUMAG00000016952	POP1	100	85.020	Ursus_maritimus
MGP_CAROLIEiJ_G0019726	Pop1	83	83.942	ENSVPAG00000008278	POP1	82	83.942	Vicugna_pacos
MGP_CAROLIEiJ_G0019726	Pop1	100	73.145	ENSVVUG00000010994	POP1	100	73.145	Vulpes_vulpes
MGP_CAROLIEiJ_G0019726	Pop1	100	41.356	ENSXCOG00000017043	POP1	100	40.896	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019726	Pop1	100	44.923	ENSXMAG00000002472	POP1	100	44.423	Xiphophorus_maculatus