EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019807 (Gene tree)
Gene ID: 110311070
Gene Symbol: Fam83a
Alias: -
Full Name: family with sequence similarity 83 member A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 25220 bases
Position: chr15:51996157-52021376
Accession: 110311070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038251	FAM83	PF07894.12	2.9e-98	1	1
MGP_CAROLIEiJ_P0038252	FAM83	PF07894.12	1.9e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038251	-	2594	-	MGP_CAROLIEiJ_P0038251	436 (aa)	XP_021039959	UPI000A3176CE
MGP_CAROLIEiJ_T0038252	-	1183	-	MGP_CAROLIEiJ_P0038252	258 (aa)	-	-
MGP_CAROLIEiJ_T0038253	-	529	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0019807	Fam83a	88	32.468	MGP_CAROLIEiJ_G0029741	Fam83e	59	34.256
MGP_CAROLIEiJ_G0019807	Fam83a	93	33.058	MGP_CAROLIEiJ_G0020042	Fam83f	56	35.587

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSG00000147689	FAM83A	100	81.236	Homo_sapiens
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.189	ENSAMEG00000011084	FAM83A	100	82.192	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019807	Fam83a	99	67.829	ENSAPLG00000010979	FAM83A	98	57.666	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019807	Fam83a	99	70.930	ENSACAG00000009582	FAM83A	99	58.202	Anolis_carolinensis
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.494	ENSANAG00000009236	FAM83A	100	81.236	Aotus_nancymaae
MGP_CAROLIEiJ_G0019807	Fam83a	98	46.457	ENSAMXG00000016523	FAM83A	85	41.709	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019807	Fam83a	99	87.160	ENSBTAG00000005877	FAM83A	100	80.963	Bos_taurus
MGP_CAROLIEiJ_G0019807	Fam83a	100	87.597	ENSCJAG00000043710	FAM83A	100	81.250	Callithrix_jacchus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.494	ENSCAFG00000000997	FAM83A	100	81.881	Canis_familiaris
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.494	ENSCAFG00020006007	FAM83A	100	81.881	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019807	Fam83a	99	86.770	ENSCHIG00000011014	FAM83A	100	79.817	Capra_hircus
MGP_CAROLIEiJ_G0019807	Fam83a	99	80.156	ENSTSYG00000031160	-	100	80.156	Carlito_syrichta
MGP_CAROLIEiJ_G0019807	Fam83a	100	84.109	ENSCAPG00000014280	-	100	84.109	Cavia_aperea
MGP_CAROLIEiJ_G0019807	Fam83a	99	84.436	ENSCPOG00000001072	FAM83A	100	77.523	Cavia_porcellus
MGP_CAROLIEiJ_G0019807	Fam83a	100	87.209	ENSCCAG00000023697	FAM83A	98	86.923	Cebus_capucinus
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSCATG00000000664	FAM83A	100	80.778	Cercocebus_atys
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSCLAG00000000631	FAM83A	100	81.422	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSCSAG00000010651	FAM83A	100	81.007	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019807	Fam83a	63	75.362	ENSCHOG00000001262	-	100	75.362	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0019807	Fam83a	99	74.319	ENSCPBG00000020691	FAM83A	90	70.930	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSCANG00000029806	FAM83A	100	81.007	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019807	Fam83a	100	86.047	ENSCGRG00001010415	Fam83a	100	86.047	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019807	Fam83a	99	85.992	ENSDNOG00000048832	FAM83A	100	76.606	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSDORG00000001227	Fam83a	100	83.028	Dipodomys_ordii
MGP_CAROLIEiJ_G0019807	Fam83a	99	82.879	ENSETEG00000007694	FAM83A	100	82.879	Echinops_telfairi
MGP_CAROLIEiJ_G0019807	Fam83a	99	86.381	ENSEASG00005022594	FAM83A	100	81.651	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019807	Fam83a	99	87.160	ENSECAG00000018998	FAM83A	100	82.110	Equus_caballus
MGP_CAROLIEiJ_G0019807	Fam83a	99	85.603	ENSEEUG00000002169	FAM83A	100	79.358	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019807	Fam83a	99	44.487	ENSELUG00000023006	FAM83A	55	46.452	Esox_lucius
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.883	ENSFCAG00000032933	FAM83A	98	85.714	Felis_catus
MGP_CAROLIEiJ_G0019807	Fam83a	99	65.116	ENSFALG00000002450	FAM83A	95	56.501	Ficedula_albicollis
MGP_CAROLIEiJ_G0019807	Fam83a	99	65.759	ENSGALG00000041748	FAM83A	91	61.702	Gallus_gallus
MGP_CAROLIEiJ_G0019807	Fam83a	72	40.102	ENSGACG00000005666	-	77	38.991	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019807	Fam83a	99	74.319	ENSGAGG00000008687	FAM83A	96	62.028	Gopherus_agassizii
MGP_CAROLIEiJ_G0019807	Fam83a	100	88.760	ENSGGOG00000008194	FAM83A	100	80.092	Gorilla_gorilla
MGP_CAROLIEiJ_G0019807	Fam83a	99	90.272	ENSSTOG00000003122	FAM83A	100	84.862	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.494	ENSJJAG00000019316	Fam83a	100	83.945	Jaculus_jaculus
MGP_CAROLIEiJ_G0019807	Fam83a	99	50.193	ENSLACG00000009464	FAM83A	71	51.000	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019807	Fam83a	99	51.938	ENSLOCG00000009259	FAM83A	95	50.000	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSMFAG00000044205	FAM83A	100	81.236	Macaca_fascicularis
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.327	ENSMMUG00000006049	FAM83A	100	81.007	Macaca_mulatta
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSMNEG00000027364	FAM83A	100	81.236	Macaca_nemestrina
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.327	ENSMLEG00000043861	FAM83A	80	88.372	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019807	Fam83a	99	65.759	ENSMGAG00000012606	FAM83A	98	55.760	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019807	Fam83a	100	75.799	ENSMAUG00000020788	Fam83a	100	75.799	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSMICG00000010196	FAM83A	100	82.110	Microcebus_murinus
MGP_CAROLIEiJ_G0019807	Fam83a	99	92.607	ENSMOCG00000017206	Fam83a	100	90.596	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019807	Fam83a	91	40.417	ENSMMOG00000003324	-	71	40.221	Mola_mola
MGP_CAROLIEiJ_G0019807	Fam83a	99	77.043	ENSMODG00000002050	FAM83A	99	66.667	Monodelphis_domestica
MGP_CAROLIEiJ_G0019807	Fam83a	100	98.165	ENSMUSG00000051225	Fam83a	100	98.165	Mus_musculus
MGP_CAROLIEiJ_G0019807	Fam83a	100	96.560	MGP_PahariEiJ_G0019817	Fam83a	100	96.560	Mus_pahari
MGP_CAROLIEiJ_G0019807	Fam83a	100	98.165	MGP_SPRETEiJ_G0020704	Fam83a	100	98.165	Mus_spretus
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.327	ENSMPUG00000001142	FAM83A	100	81.881	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019807	Fam83a	99	84.436	ENSMLUG00000013710	FAM83A	100	80.914	Myotis_lucifugus
MGP_CAROLIEiJ_G0019807	Fam83a	99	92.218	ENSNGAG00000015485	Fam83a	100	89.908	Nannospalax_galili
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSNLEG00000005289	FAM83A	100	81.693	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019807	Fam83a	99	75.875	ENSMEUG00000001894	FAM83A	99	60.046	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019807	Fam83a	99	82.946	ENSOPRG00000004184	-	100	71.005	Ochotona_princeps
MGP_CAROLIEiJ_G0019807	Fam83a	84	86.574	ENSODEG00000003175	-	100	86.574	Octodon_degus
MGP_CAROLIEiJ_G0019807	Fam83a	99	68.482	ENSOANG00000014883	FAM83A	99	57.407	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019807	Fam83a	99	87.938	ENSOCUG00000015368	FAM83A	100	80.505	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019807	Fam83a	99	91.051	ENSOGAG00000006971	FAM83A	100	83.257	Otolemur_garnettii
MGP_CAROLIEiJ_G0019807	Fam83a	99	87.160	ENSOARG00000010773	FAM83A	100	80.505	Ovis_aries
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSPPAG00000026838	FAM83A	100	81.007	Pan_paniscus
MGP_CAROLIEiJ_G0019807	Fam83a	99	90.272	ENSPPRG00000024676	FAM83A	98	85.994	Panthera_pardus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.883	ENSPTIG00000018819	FAM83A	93	86.804	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSPTRG00000020548	FAM83A	100	81.922	Pan_troglodytes
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSPANG00000015968	FAM83A	100	81.236	Papio_anubis
MGP_CAROLIEiJ_G0019807	Fam83a	99	42.636	ENSPKIG00000018626	FAM83A	77	43.667	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019807	Fam83a	99	71.595	ENSPSIG00000006791	FAM83A	84	66.576	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019807	Fam83a	99	94.553	ENSPEMG00000022808	Fam83a	100	92.431	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019807	Fam83a	99	75.486	ENSPCIG00000013926	FAM83A	98	66.055	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019807	Fam83a	99	36.667	ENSPFOG00000018996	-	91	37.013	Poecilia_formosa
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.494	ENSPPYG00000018853	FAM83A	100	81.693	Pongo_abelii
MGP_CAROLIEiJ_G0019807	Fam83a	99	86.770	ENSPCAG00000007372	FAM83A	100	75.459	Procavia_capensis
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.716	ENSPCOG00000020976	FAM83A	100	81.193	Propithecus_coquereli
MGP_CAROLIEiJ_G0019807	Fam83a	63	78.986	ENSPVAG00000005399	FAM83A	100	79.710	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019807	Fam83a	99	46.124	ENSPNAG00000010032	FAM83A	69	47.475	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019807	Fam83a	100	94.266	ENSRNOG00000006251	Fam83a	100	94.266	Rattus_norvegicus
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.327	ENSRBIG00000035217	FAM83A	100	80.778	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019807	Fam83a	99	88.327	ENSRROG00000026779	FAM83A	100	80.320	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019807	Fam83a	100	89.147	ENSSBOG00000022424	FAM83A	100	89.147	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019807	Fam83a	99	76.265	ENSSHAG00000012870	FAM83A	99	64.706	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019807	Fam83a	99	48.438	ENSSFOG00015005546	FAM83A	60	49.169	Scleropages_formosus
MGP_CAROLIEiJ_G0019807	Fam83a	89	40.426	ENSSDUG00000011491	FAM83A	87	38.043	Seriola_dumerili
MGP_CAROLIEiJ_G0019807	Fam83a	99	71.206	ENSSPUG00000001874	FAM83A	99	58.259	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019807	Fam83a	99	87.549	ENSSSCG00000005986	FAM83A	100	82.380	Sus_scrofa
MGP_CAROLIEiJ_G0019807	Fam83a	88	67.686	ENSTGUG00000012428	FAM83A	95	57.614	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019807	Fam83a	98	37.500	ENSTNIG00000019077	FAM83A	98	39.542	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019807	Fam83a	84	88.426	ENSTBEG00000004966	FAM83A	78	74.631	Tupaia_belangeri
MGP_CAROLIEiJ_G0019807	Fam83a	99	84.825	ENSTTRG00000005395	FAM83A	100	79.817	Tursiops_truncatus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSUAMG00000012556	FAM83A	100	83.257	Ursus_americanus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSUMAG00000021979	FAM83A	100	77.752	Ursus_maritimus
MGP_CAROLIEiJ_G0019807	Fam83a	99	89.105	ENSVVUG00000016221	FAM83A	100	81.881	Vulpes_vulpes
MGP_CAROLIEiJ_G0019807	Fam83a	99	57.977	ENSXETG00000023191	fam83a	99	49.663	Xenopus_tropicalis