EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019820 (Gene tree)
Gene ID: 110310681
Gene Symbol: Trmt12
Alias: 4632406N01Rik|Tyw2
Full Name: tRNA methyltranferase 12
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 4141 bases
Position: chr15:52897980-52902120
Accession: 1915510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038281	Met_10	PF02475.16	3.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038281	-	4141	-	MGP_CAROLIEiJ_P0038281	445 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019820	Trmt12	98	80.866	ENSG00000183665	TRMT12	98	80.866	Homo_sapiens
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.847	ENSAPOG00000011979	trmt12	97	50.847	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.271	ENSAMEG00000019612	TRMT12	98	79.271	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019820	Trmt12	91	49.261	ENSACIG00000012982	trmt12	99	49.261	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019820	Trmt12	91	50.246	ENSAOCG00000020570	trmt12	96	51.269	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019820	Trmt12	91	50.000	ENSAPEG00000006335	trmt12	96	51.015	Amphiprion_percula
MGP_CAROLIEiJ_G0019820	Trmt12	93	51.332	ENSATEG00000018316	trmt12	97	51.332	Anabas_testudineus
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSACLG00000001008	trmt12	96	50.000	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019820	Trmt12	93	51.537	ENSAMXG00000040366	trmt12	97	51.537	Astyanax_mexicanus
MGP_CAROLIEiJ_G0019820	Trmt12	97	80.974	ENSBTAG00000020398	TRMT12	93	80.974	Bos_taurus
MGP_CAROLIEiJ_G0019820	Trmt12	51	39.301	WBGene00009586	F40F9.10	56	36.194	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.271	ENSCJAG00000022174	TRMT12	98	79.271	Callithrix_jacchus
MGP_CAROLIEiJ_G0019820	Trmt12	98	78.360	ENSCAFG00000001040	TRMT12	100	78.360	Canis_familiaris
MGP_CAROLIEiJ_G0019820	Trmt12	98	78.360	ENSCAFG00020006500	TRMT12	100	78.360	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019820	Trmt12	96	81.628	ENSCHIG00000016574	TRMT12	98	81.628	Capra_hircus
MGP_CAROLIEiJ_G0019820	Trmt12	96	78.555	ENSCPOG00000026520	TRMT12	96	78.555	Cavia_porcellus
MGP_CAROLIEiJ_G0019820	Trmt12	98	80.410	ENSCSAG00000018615	TRMT12	98	80.410	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019820	Trmt12	95	63.014	ENSCPBG00000014290	TRMT12	95	63.014	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019820	Trmt12	70	44.444	ENSCING00000019633	-	97	44.444	Ciona_intestinalis
MGP_CAROLIEiJ_G0019820	Trmt12	72	46.875	ENSCSAVG00000000415	-	93	46.875	Ciona_savignyi
MGP_CAROLIEiJ_G0019820	Trmt12	96	65.207	ENSCGRG00001014834	Trmt12	98	65.207	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.153	ENSCSEG00000002675	trmt12	92	49.153	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019820	Trmt12	94	49.522	ENSCVAG00000005590	trmt12	98	49.522	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.398	ENSDARG00000060338	trmt12	96	53.114	Danio_rerio
MGP_CAROLIEiJ_G0019820	Trmt12	97	74.014	ENSETEG00000009373	TRMT12	96	74.014	Echinops_telfairi
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.271	ENSEASG00005022441	TRMT12	100	79.271	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019820	Trmt12	98	74.886	ENSEEUG00000004844	TRMT12	98	74.886	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.639	ENSELUG00000004240	trmt12	99	50.254	Esox_lucius
MGP_CAROLIEiJ_G0019820	Trmt12	64	63.604	ENSFALG00000003825	TRMT12	97	70.561	Ficedula_albicollis
MGP_CAROLIEiJ_G0019820	Trmt12	98	78.588	ENSFDAG00000016647	TRMT12	100	78.588	Fukomys_damarensis
MGP_CAROLIEiJ_G0019820	Trmt12	91	41.872	ENSFHEG00000017338	trmt12	98	41.872	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019820	Trmt12	80	63.510	ENSGALG00000006773	TRMT12	77	63.510	Gallus_gallus
MGP_CAROLIEiJ_G0019820	Trmt12	93	48.786	ENSGAFG00000020056	trmt12	96	48.786	Gambusia_affinis
MGP_CAROLIEiJ_G0019820	Trmt12	87	51.554	ENSGACG00000017351	trmt12	100	50.244	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019820	Trmt12	97	62.247	ENSGAGG00000006032	TRMT12	99	62.247	Gopherus_agassizii
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSHBUG00000016412	trmt12	96	50.000	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.224	ENSHGLG00000020498	TRMT12	99	79.224	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.452	ENSHGLG00100020132	TRMT12	99	79.452	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.029	ENSHCOG00000005050	trmt12	95	52.286	Hippocampus_comes
MGP_CAROLIEiJ_G0019820	Trmt12	95	49.882	ENSIPUG00000018011	trmt12	91	49.882	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019820	Trmt12	97	80.184	ENSSTOG00000030617	TRMT12	98	80.876	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019820	Trmt12	93	48.916	ENSKMAG00000000891	trmt12	96	48.916	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019820	Trmt12	93	47.330	ENSLBEG00000028712	trmt12	96	47.330	Labrus_bergylta
MGP_CAROLIEiJ_G0019820	Trmt12	53	55.042	ENSLBEG00000017456	-	88	55.042	Labrus_bergylta
MGP_CAROLIEiJ_G0019820	Trmt12	97	55.876	ENSLACG00000015869	TRMT12	98	55.876	Latimeria_chalumnae
MGP_CAROLIEiJ_G0019820	Trmt12	95	55.792	ENSLOCG00000015290	trmt12	99	55.792	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019820	Trmt12	97	80.046	ENSLAFG00000012519	TRMT12	98	80.046	Loxodonta_africana
MGP_CAROLIEiJ_G0019820	Trmt12	98	81.422	ENSMMUG00000015490	TRMT12	98	81.422	Macaca_mulatta
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.153	ENSMAMG00000020311	trmt12	97	49.153	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSMZEG00005007349	trmt12	96	50.000	Maylandia_zebra
MGP_CAROLIEiJ_G0019820	Trmt12	96	59.259	ENSMGAG00000004174	TRMT12	95	59.259	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019820	Trmt12	91	49.261	ENSMMOG00000000412	trmt12	95	49.261	Mola_mola
MGP_CAROLIEiJ_G0019820	Trmt12	97	65.278	ENSMODG00000021403	-	96	65.278	Monodelphis_domestica
MGP_CAROLIEiJ_G0019820	Trmt12	96	67.366	ENSMODG00000011798	-	87	67.366	Monodelphis_domestica
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.243	ENSMALG00000008668	trmt12	96	50.243	Monopterus_albus
MGP_CAROLIEiJ_G0019820	Trmt12	97	97.685	ENSMUSG00000037085	Trmt12	97	97.685	Mus_musculus
MGP_CAROLIEiJ_G0019820	Trmt12	99	92.027	MGP_PahariEiJ_G0019829	Trmt12	99	92.027	Mus_pahari
MGP_CAROLIEiJ_G0019820	Trmt12	97	97.222	MGP_SPRETEiJ_G0020717	Trmt12	97	97.222	Mus_spretus
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.727	ENSMPUG00000019150	TRMT12	98	79.727	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019820	Trmt12	98	76.765	ENSMLUG00000003753	TRMT12	100	76.765	Myotis_lucifugus
MGP_CAROLIEiJ_G0019820	Trmt12	98	82.420	ENSNGAG00000014548	Trmt12	100	82.420	Nannospalax_galili
MGP_CAROLIEiJ_G0019820	Trmt12	91	50.369	ENSNBRG00000021510	trmt12	95	50.369	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019820	Trmt12	97	70.670	ENSOPRG00000008067	TRMT12	97	70.670	Ochotona_princeps
MGP_CAROLIEiJ_G0019820	Trmt12	98	78.588	ENSODEG00000018933	TRMT12	100	78.588	Octodon_degus
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.485	ENSONIG00000002614	trmt12	96	50.485	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019820	Trmt12	97	65.376	ENSOANG00000009987	TRMT12	99	65.376	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019820	Trmt12	97	74.253	ENSOCUG00000026379	TRMT12	97	74.253	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSORLG00000001280	trmt12	96	49.880	Oryzias_latipes
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.758	ENSORLG00020000708	trmt12	96	49.758	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSORLG00015012344	trmt12	96	50.000	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.880	ENSOMEG00000015267	trmt12	95	49.880	Oryzias_melastigma
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.271	ENSOGAG00000015845	TRMT12	100	79.271	Otolemur_garnettii
MGP_CAROLIEiJ_G0019820	Trmt12	95	54.610	ENSPKIG00000004640	trmt12	99	54.854	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019820	Trmt12	58	65.299	ENSPSIG00000003476	TRMT12	99	65.299	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019820	Trmt12	93	47.585	ENSPMGG00000016356	trmt12	94	47.585	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0019820	Trmt12	97	66.897	ENSPCIG00000002967	TRMT12	89	66.897	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019820	Trmt12	97	45.940	ENSPFOG00000016931	trmt12	99	45.940	Poecilia_formosa
MGP_CAROLIEiJ_G0019820	Trmt12	93	47.087	ENSPLAG00000020621	trmt12	96	47.087	Poecilia_latipinna
MGP_CAROLIEiJ_G0019820	Trmt12	93	48.544	ENSPMEG00000000818	trmt12	96	48.544	Poecilia_mexicana
MGP_CAROLIEiJ_G0019820	Trmt12	93	47.700	ENSPREG00000011621	trmt12	96	48.544	Poecilia_reticulata
MGP_CAROLIEiJ_G0019820	Trmt12	98	81.093	ENSPPYG00000018866	TRMT12	98	81.093	Pongo_abelii
MGP_CAROLIEiJ_G0019820	Trmt12	98	77.523	ENSPCAG00000000556	TRMT12	98	77.523	Procavia_capensis
MGP_CAROLIEiJ_G0019820	Trmt12	98	78.360	ENSPVAG00000009149	TRMT12	99	78.360	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019820	Trmt12	91	49.754	ENSPNYG00000010696	trmt12	99	49.754	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019820	Trmt12	95	49.650	ENSPNAG00000019028	trmt12	99	49.650	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019820	Trmt12	98	90.389	ENSRNOG00000008978	Trmt12	100	90.389	Rattus_norvegicus
MGP_CAROLIEiJ_G0019820	Trmt12	95	66.981	ENSSHAG00000003345	TRMT12	94	66.981	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019820	Trmt12	95	52.570	ENSSFOG00015006090	trmt12	99	52.570	Scleropages_formosus
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.515	ENSSMAG00000013247	trmt12	96	49.515	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019820	Trmt12	88	51.276	ENSSDUG00000006168	trmt12	92	51.276	Seriola_dumerili
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSSLDG00000025007	trmt12	96	50.000	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019820	Trmt12	96	58.986	ENSSPUG00000005321	TRMT12	96	58.986	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019820	Trmt12	93	50.000	ENSSPAG00000009435	trmt12	93	50.000	Stegastes_partitus
MGP_CAROLIEiJ_G0019820	Trmt12	96	55.738	ENSTGUG00000002280	TRMT12	99	56.440	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019820	Trmt12	97	48.028	ENSTRUG00000011548	trmt12	95	47.368	Takifugu_rubripes
MGP_CAROLIEiJ_G0019820	Trmt12	97	47.005	ENSTNIG00000016866	trmt12	100	47.005	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019820	Trmt12	97	79.493	ENSUAMG00000002067	TRMT12	99	79.493	Ursus_americanus
MGP_CAROLIEiJ_G0019820	Trmt12	98	79.954	ENSVPAG00000006519	TRMT12	99	79.954	Vicugna_pacos
MGP_CAROLIEiJ_G0019820	Trmt12	98	77.169	ENSVVUG00000016790	TRMT12	98	77.169	Vulpes_vulpes
MGP_CAROLIEiJ_G0019820	Trmt12	96	57.674	ENSXETG00000009641	trmt12	96	57.674	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019820	Trmt12	93	48.558	ENSXCOG00000016505	trmt12	97	48.558	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019820	Trmt12	93	49.034	ENSXMAG00000025318	trmt12	96	49.034	Xiphophorus_maculatus