EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019855 (Gene tree)
Gene ID: 110310065
Gene Symbol: Khdrbs3
Alias: Etle|SLM-2|Salp|T-STAR
Full Name: KH domain containing%2C RNA binding%2C signal transduction associated 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 151182 bases
Position: chr15:62645692-62796873
Accession: 1313312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038401	KH_1	PF00013.29	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038401	-	1884	-	MGP_CAROLIEiJ_P0038401	346 (aa)	-	UPI000A313814

Gene Model

Click here to download MGP_CAROLIEiJ_G0019855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	55.307	MGP_CAROLIEiJ_G0026534	Khdrbs1	78	56.825
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	63.818	MGP_CAROLIEiJ_G0014010	Khdrbs2	99	65.915
MGP_CAROLIEiJ_G0019855	Khdrbs3	77	35.789	MGP_CAROLIEiJ_G0021057	Qk	71	36.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.110	ENSG00000131773	KHDRBS3	99	99.367	Homo_sapiens
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	95.584	ENSAMEG00000016744	KHDRBS3	100	93.538	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	68.750	ENSACIG00000002529	KHDRBS3	100	74.368	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.971	ENSAOCG00000006836	KHDRBS3	99	77.326	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.971	ENSAPEG00000005415	KHDRBS3	99	77.326	Amphiprion_percula
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	ENSATEG00000010658	KHDRBS3	99	76.744	Anabas_testudineus
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	88.994	ENSAPLG00000014746	KHDRBS3	99	88.679	Anas_platyrhynchos
MGP_CAROLIEiJ_G0019855	Khdrbs3	85	85.034	ENSACAG00000012042	KHDRBS3	100	84.354	Anolis_carolinensis
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	87.896	ENSANAG00000019406	KHDRBS3	100	89.914	Aotus_nancymaae
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.681	ENSACLG00000010826	KHDRBS3	99	76.744	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSBTAG00000002181	KHDRBS3	100	95.954	Bos_taurus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSCJAG00000004331	KHDRBS3	100	96.821	Callithrix_jacchus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSCAFG00000001166	KHDRBS3	100	95.954	Canis_familiaris
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	95.899	ENSCAFG00020013570	KHDRBS3	99	95.899	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSCHIG00000016533	KHDRBS3	100	95.954	Capra_hircus
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	96.835	ENSTSYG00000004106	KHDRBS3	100	96.835	Carlito_syrichta
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	93.143	ENSCPOG00000000342	KHDRBS3	100	93.143	Cavia_porcellus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.110	ENSCCAG00000031191	KHDRBS3	100	97.110	Cebus_capucinus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.532	ENSCATG00000034823	KHDRBS3	100	96.532	Cercocebus_atys
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	95.614	ENSCLAG00000002164	KHDRBS3	100	95.614	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019855	Khdrbs3	94	95.385	ENSCSAG00000009815	KHDRBS3	100	95.385	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	89.914	ENSCPBG00000019654	KHDRBS3	100	89.337	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	95.930	ENSCANG00000031881	KHDRBS3	100	96.765	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	99.051	ENSCGRG00001000113	Khdrbs3	100	99.051	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.362	ENSCSEG00000013385	KHDRBS3	99	74.709	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	76.453	ENSCVAG00000007211	KHDRBS3	99	76.453	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	85	70.068	ENSDARG00000101020	KHDRBS3	97	67.881	Danio_rerio
MGP_CAROLIEiJ_G0019855	Khdrbs3	85	91.809	ENSDNOG00000010878	KHDRBS3	100	91.809	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019855	Khdrbs3	94	92.308	ENSDORG00000014595	-	94	92.308	Dipodomys_ordii
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	79.180	ENSETEG00000004701	KHDRBS3	100	79.180	Echinops_telfairi
MGP_CAROLIEiJ_G0019855	Khdrbs3	93	95.950	ENSEASG00005022023	KHDRBS3	99	96.845	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSECAG00000010194	KHDRBS3	100	96.821	Equus_caballus
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	77.532	ENSEEUG00000007062	KHDRBS3	100	77.532	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.072	ENSELUG00000011955	KHDRBS3	99	75.072	Esox_lucius
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSFCAG00000000229	KHDRBS3	100	95.954	Felis_catus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	88.473	ENSFALG00000002752	KHDRBS3	100	88.473	Ficedula_albicollis
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	96.215	ENSFDAG00000020910	KHDRBS3	93	96.215	Fukomys_damarensis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.872	ENSFHEG00000017679	KHDRBS3	99	75.872	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	73.354	ENSGMOG00000009156	KHDRBS3	100	72.642	Gadus_morhua
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	88.473	ENSGALG00000031519	KHDRBS3	100	88.473	Gallus_gallus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	ENSGAFG00000018918	KHDRBS3	99	76.744	Gambusia_affinis
MGP_CAROLIEiJ_G0019855	Khdrbs3	87	73.203	ENSGACG00000008847	KHDRBS3	100	72.727	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	89.049	ENSGAGG00000022819	KHDRBS3	100	88.473	Gopherus_agassizii
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.110	ENSGGOG00000000940	KHDRBS3	100	97.110	Gorilla_gorilla
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	ENSHBUG00000009781	KHDRBS3	99	76.453	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	78.324	ENSHGLG00000008364	-	100	78.324	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSHGLG00000006718	KHDRBS3	100	95.954	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019855	Khdrbs3	97	79.762	ENSHGLG00100010562	-	96	79.762	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	96.203	ENSHGLG00100004576	-	100	96.203	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019855	Khdrbs3	96	74.398	ENSHCOG00000009110	KHDRBS3	99	73.716	Hippocampus_comes
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	76.453	ENSIPUG00000004984	khdrbs3	99	76.453	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.087	ENSSTOG00000008710	KHDRBS3	100	95.087	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	93.642	ENSJJAG00000011049	Khdrbs3	100	93.642	Jaculus_jaculus
MGP_CAROLIEiJ_G0019855	Khdrbs3	77	77.903	ENSKMAG00000000152	-	80	76.779	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.931	ENSLBEG00000003951	KHDRBS3	86	75.575	Labrus_bergylta
MGP_CAROLIEiJ_G0019855	Khdrbs3	85	79.932	ENSLOCG00000003734	KHDRBS3	99	79.932	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	94	93.538	ENSLAFG00000004849	KHDRBS3	98	93.538	Loxodonta_africana
MGP_CAROLIEiJ_G0019855	Khdrbs3	97	91.691	ENSMFAG00000041845	KHDRBS3	100	96.928	Macaca_fascicularis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	94.186	ENSMMUG00000022248	KHDRBS3	99	96.845	Macaca_mulatta
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSMNEG00000038285	KHDRBS3	100	96.821	Macaca_nemestrina
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	96.835	ENSMLEG00000032520	KHDRBS3	100	96.835	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.101	ENSMAMG00000003695	KHDRBS3	99	76.453	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	ENSMZEG00005001896	KHDRBS3	99	76.453	Maylandia_zebra
MGP_CAROLIEiJ_G0019855	Khdrbs3	97	86.842	ENSMGAG00000012888	KHDRBS3	100	87.209	Meleagris_gallopavo
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	82.709	ENSMAUG00000008539	Khdrbs3	100	82.709	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSMICG00000027467	KHDRBS3	100	96.821	Microcebus_murinus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	98.844	ENSMOCG00000020954	Khdrbs3	100	98.844	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019855	Khdrbs3	77	79.104	ENSMMOG00000021238	KHDRBS3	69	78.277	Mola_mola
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	91.908	ENSMODG00000000975	KHDRBS3	99	91.908	Monodelphis_domestica
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.971	ENSMALG00000016210	KHDRBS3	99	77.326	Monopterus_albus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	99.422	ENSMUSG00000022332	Khdrbs3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	100.000	MGP_PahariEiJ_G0019860	Khdrbs3	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	99.422	MGP_SPRETEiJ_G0020753	Khdrbs3	100	99.422	Mus_spretus
MGP_CAROLIEiJ_G0019855	Khdrbs3	94	93.846	ENSMPUG00000001869	KHDRBS3	100	93.846	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019855	Khdrbs3	95	84.290	ENSMLUG00000004054	KHDRBS3	100	84.290	Myotis_lucifugus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	77.233	ENSNBRG00000000697	KHDRBS3	100	76.301	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.243	ENSNLEG00000010766	KHDRBS3	100	96.243	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	94.937	ENSOPRG00000000404	KHDRBS3	100	94.937	Ochotona_princeps
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSODEG00000000682	KHDRBS3	100	95.954	Octodon_degus
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	77.358	ENSONIG00000007652	KHDRBS3	100	76.341	Oreochromis_niloticus
MGP_CAROLIEiJ_G0019855	Khdrbs3	97	82.143	ENSOANG00000014074	KHDRBS3	100	83.631	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0019855	Khdrbs3	95	94.207	ENSOCUG00000000743	KHDRBS3	100	94.207	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.362	ENSORLG00000013441	KHDRBS3	99	74.709	Oryzias_latipes
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	75.362	ENSORLG00020021838	KHDRBS3	99	74.709	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	72.754	ENSORLG00015010093	KHDRBS3	99	71.802	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.243	ENSOGAG00000005150	KHDRBS3	100	96.243	Otolemur_garnettii
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	90.407	ENSOARG00000005036	KHDRBS3	100	90.407	Ovis_aries
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSPPAG00000043998	KHDRBS3	100	96.821	Pan_paniscus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.954	ENSPPRG00000001453	KHDRBS3	100	95.954	Panthera_pardus
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	95.886	ENSPTIG00000005373	KHDRBS3	91	95.886	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	87.572	ENSPTRG00000020608	KHDRBS3	100	87.572	Pan_troglodytes
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.821	ENSPANG00000006134	KHDRBS3	100	96.821	Papio_anubis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	76.812	ENSPKIG00000002433	KHDRBS3	99	76.163	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	88.218	ENSPSIG00000004366	KHDRBS3	100	87.644	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	74.425	ENSPMGG00000018866	KHDRBS3	99	74.063	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.971	ENSPREG00000015667	KHDRBS3	99	77.326	Poecilia_reticulata
MGP_CAROLIEiJ_G0019855	Khdrbs3	97	95.252	ENSPPYG00000018899	KHDRBS3	100	95.252	Pongo_abelii
MGP_CAROLIEiJ_G0019855	Khdrbs3	91	93.038	ENSPVAG00000017021	KHDRBS3	100	93.038	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	67.435	ENSPNYG00000007200	KHDRBS3	99	66.474	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.326	ENSPNAG00000013500	KHDRBS3	99	77.326	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.399	ENSRNOG00000009539	Khdrbs3	100	97.399	Rattus_norvegicus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.110	ENSRBIG00000036854	KHDRBS3	100	97.110	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	97.110	ENSRROG00000044792	KHDRBS3	100	97.110	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.665	ENSSBOG00000020642	KHDRBS3	100	97.270	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.035	ENSSFOG00015013177	khdrbs3	99	77.035	Scleropages_formosus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.101	ENSSMAG00000020535	KHDRBS3	99	76.453	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	ENSSDUG00000000996	KHDRBS3	99	76.744	Seriola_dumerili
MGP_CAROLIEiJ_G0019855	Khdrbs3	85	66.330	ENSSLDG00000006072	KHDRBS3	86	65.541	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019855	Khdrbs3	71	77.328	ENSSARG00000011751	KHDRBS3	100	77.328	Sorex_araneus
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	89.625	ENSSPUG00000005628	KHDRBS3	100	89.049	Sphenodon_punctatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.971	ENSSPAG00000018331	KHDRBS3	99	77.326	Stegastes_partitus
MGP_CAROLIEiJ_G0019855	Khdrbs3	95	95.441	ENSSSCG00000005941	KHDRBS3	93	95.441	Sus_scrofa
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	88.761	ENSTGUG00000012611	KHDRBS3	100	88.761	Taeniopygia_guttata
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	70.435	ENSTRUG00000013451	KHDRBS3	99	69.186	Takifugu_rubripes
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	74.545	ENSTNIG00000014021	KHDRBS3	99	73.252	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	96.243	ENSTBEG00000004773	KHDRBS3	100	96.243	Tupaia_belangeri
MGP_CAROLIEiJ_G0019855	Khdrbs3	100	95.376	ENSTTRG00000001270	KHDRBS3	100	95.376	Tursiops_truncatus
MGP_CAROLIEiJ_G0019855	Khdrbs3	94	94.154	ENSUMAG00000002010	KHDRBS3	100	96.246	Ursus_maritimus
MGP_CAROLIEiJ_G0019855	Khdrbs3	92	95.899	ENSVVUG00000019368	KHDRBS3	99	95.899	Vulpes_vulpes
MGP_CAROLIEiJ_G0019855	Khdrbs3	93	77.950	ENSXETG00000009227	khdrbs3	100	77.950	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019855	Khdrbs3	72	76.800	ENSXCOG00000010479	KHDRBS3	81	75.904	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.101	ENSXMAG00000005362	KHDRBS3	99	76.453	Xiphophorus_maculatus