EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019897 (Gene tree)
Gene ID: 110310882
Gene Symbol: Zc3h3
Alias: Smicl
Full Name: zinc finger CCCH-type containing 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 86409 bases
Position: chr15:69711924-69798332
Accession: 110310882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038530	zf-CCCH	PF00642.24	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038530	-	3340	XM_021184025	MGP_CAROLIEiJ_P0038530	947 (aa)	XP_021039684	UPI000A318B2F

Gene Model

Click here to download MGP_CAROLIEiJ_G0019897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.094	ENSG00000014164	ZC3H3	100	70.094	Homo_sapiens
MGP_CAROLIEiJ_G0019897	Zc3h3	65	42.068	ENSAPOG00000011522	zc3h3	92	34.831	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0019897	Zc3h3	55	43.340	ENSACIG00000005563	zc3h3	95	34.732	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0019897	Zc3h3	65	42.188	ENSAOCG00000013763	zc3h3	98	42.234	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0019897	Zc3h3	63	41.877	ENSAPEG00000020037	zc3h3	88	41.924	Amphiprion_percula
MGP_CAROLIEiJ_G0019897	Zc3h3	86	33.776	ENSATEG00000003718	zc3h3	59	44.422	Anabas_testudineus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.293	ENSANAG00000018742	ZC3H3	100	70.921	Aotus_nancymaae
MGP_CAROLIEiJ_G0019897	Zc3h3	63	44.828	ENSACLG00000023035	zc3h3	65	44.828	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0019897	Zc3h3	91	66.553	ENSBTAG00000021472	ZC3H3	99	66.553	Bos_taurus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.084	ENSCJAG00000021439	ZC3H3	100	70.471	Callithrix_jacchus
MGP_CAROLIEiJ_G0019897	Zc3h3	87	66.002	ENSCAFG00000001299	ZC3H3	100	68.057	Canis_familiaris
MGP_CAROLIEiJ_G0019897	Zc3h3	99	66.084	ENSCAFG00020018654	ZC3H3	100	67.779	Canis_lupus_dingo
MGP_CAROLIEiJ_G0019897	Zc3h3	100	65.971	ENSCHIG00000018027	ZC3H3	100	65.553	Capra_hircus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.656	ENSTSYG00000034906	ZC3H3	100	71.160	Carlito_syrichta
MGP_CAROLIEiJ_G0019897	Zc3h3	97	64.086	ENSCAPG00000013918	ZC3H3	100	65.264	Cavia_aperea
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.440	ENSCPOG00000006248	ZC3H3	99	69.916	Cavia_porcellus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	71.039	ENSCCAG00000035267	ZC3H3	100	70.934	Cebus_capucinus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.157	ENSCATG00000020900	ZC3H3	100	70.199	Cercocebus_atys
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.397	ENSCLAG00000009999	ZC3H3	99	69.456	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.634	ENSCSAG00000009074	ZC3H3	99	69.885	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	43.941	ENSCPBG00000019050	ZC3H3	89	47.356	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019897	Zc3h3	100	68.201	ENSCANG00000032420	ZC3H3	100	68.377	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	85.535	ENSCGRG00001016268	Zc3h3	100	85.430	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019897	Zc3h3	100	85.535	ENSCGRG00000012889	Zc3h3	100	85.430	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019897	Zc3h3	62	41.777	ENSCSEG00000002583	zc3h3	70	42.293	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0019897	Zc3h3	87	62.019	ENSDNOG00000031054	ZC3H3	96	63.223	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019897	Zc3h3	98	66.561	ENSDORG00000023832	Zc3h3	100	67.452	Dipodomys_ordii
MGP_CAROLIEiJ_G0019897	Zc3h3	71	53.863	ENSETEG00000014836	-	63	71.552	Echinops_telfairi
MGP_CAROLIEiJ_G0019897	Zc3h3	100	68.144	ENSEASG00005009621	ZC3H3	99	68.388	Equus_asinus_asinus
MGP_CAROLIEiJ_G0019897	Zc3h3	81	70.375	ENSECAG00000012556	ZC3H3	86	70.375	Equus_caballus
MGP_CAROLIEiJ_G0019897	Zc3h3	92	59.103	ENSEEUG00000007986	ZC3H3	91	59.103	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019897	Zc3h3	54	43.876	ENSELUG00000024269	zc3h3	59	43.627	Esox_lucius
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.271	ENSFCAG00000013238	ZC3H3	100	68.894	Felis_catus
MGP_CAROLIEiJ_G0019897	Zc3h3	67	52.194	ENSFALG00000009538	ZC3H3	86	46.737	Ficedula_albicollis
MGP_CAROLIEiJ_G0019897	Zc3h3	100	68.894	ENSFDAG00000017737	ZC3H3	99	68.868	Fukomys_damarensis
MGP_CAROLIEiJ_G0019897	Zc3h3	69	42.697	ENSFHEG00000017714	zc3h3	63	44.828	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0019897	Zc3h3	93	34.989	ENSGAFG00000014360	zc3h3	91	35.804	Gambusia_affinis
MGP_CAROLIEiJ_G0019897	Zc3h3	99	69.799	ENSGGOG00000002833	ZC3H3	100	69.223	Gorilla_gorilla
MGP_CAROLIEiJ_G0019897	Zc3h3	63	44.828	ENSHBUG00000004627	zc3h3	65	44.828	Haplochromis_burtoni
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.208	ENSHGLG00000011234	ZC3H3	99	69.770	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019897	Zc3h3	91	67.914	ENSHGLG00100006782	ZC3H3	97	67.914	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019897	Zc3h3	60	39.531	ENSHCOG00000006579	zc3h3	93	35.253	Hippocampus_comes
MGP_CAROLIEiJ_G0019897	Zc3h3	84	33.979	ENSIPUG00000006438	zc3h3	91	34.014	Ictalurus_punctatus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.833	ENSSTOG00000004358	ZC3H3	99	70.386	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	74.764	ENSJJAG00000023757	Zc3h3	100	74.555	Jaculus_jaculus
MGP_CAROLIEiJ_G0019897	Zc3h3	69	45.556	ENSKMAG00000017876	zc3h3	64	45.720	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0019897	Zc3h3	77	41.667	ENSLOCG00000008621	ZC3H3	58	44.821	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.052	ENSMFAG00000036060	ZC3H3	100	70.304	Macaca_fascicularis
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.706	ENSMNEG00000029433	ZC3H3	99	69.958	Macaca_nemestrina
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.738	ENSMLEG00000038139	ZC3H3	100	69.990	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019897	Zc3h3	52	43.738	ENSMAMG00000014787	zc3h3	52	44.275	Mastacembelus_armatus
MGP_CAROLIEiJ_G0019897	Zc3h3	63	44.828	ENSMZEG00005017290	zc3h3	65	44.828	Maylandia_zebra
MGP_CAROLIEiJ_G0019897	Zc3h3	100	85.414	ENSMAUG00000011009	Zc3h3	100	85.310	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	71.399	ENSMICG00000001100	ZC3H3	100	70.619	Microcebus_murinus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	84.575	ENSMOCG00000000733	Zc3h3	100	84.470	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019897	Zc3h3	69	38.833	ENSMMOG00000016823	zc3h3	92	33.605	Mola_mola
MGP_CAROLIEiJ_G0019897	Zc3h3	86	59.152	ENSMODG00000011385	ZC3H3	94	58.244	Monodelphis_domestica
MGP_CAROLIEiJ_G0019897	Zc3h3	68	40.059	ENSMALG00000014610	zc3h3	52	44.551	Monopterus_albus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	96.842	ENSMUSG00000075600	Zc3h3	100	96.842	Mus_musculus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	93.724	MGP_PahariEiJ_G0019905	Zc3h3	100	93.828	Mus_pahari
MGP_CAROLIEiJ_G0019897	Zc3h3	100	97.053	MGP_SPRETEiJ_G0020797	Zc3h3	100	97.053	Mus_spretus
MGP_CAROLIEiJ_G0019897	Zc3h3	91	68.397	ENSMPUG00000008357	ZC3H3	97	68.182	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019897	Zc3h3	100	79.791	ENSNGAG00000008574	Zc3h3	100	79.895	Nannospalax_galili
MGP_CAROLIEiJ_G0019897	Zc3h3	63	44.828	ENSNBRG00000005454	zc3h3	87	35.891	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0019897	Zc3h3	100	67.678	ENSNLEG00000001681	ZC3H3	100	67.678	Nomascus_leucogenys
MGP_CAROLIEiJ_G0019897	Zc3h3	84	57.302	ENSMEUG00000008554	ZC3H3	86	57.213	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.142	ENSODEG00000014239	ZC3H3	100	68.757	Octodon_degus
MGP_CAROLIEiJ_G0019897	Zc3h3	60	44.854	ENSORLG00000026930	zc3h3	67	45.524	Oryzias_latipes
MGP_CAROLIEiJ_G0019897	Zc3h3	60	45.224	ENSORLG00020002734	zc3h3	92	36.128	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0019897	Zc3h3	60	44.250	ENSORLG00015001257	zc3h3	70	44.314	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.110	ENSOGAG00000014907	ZC3H3	100	69.150	Otolemur_garnettii
MGP_CAROLIEiJ_G0019897	Zc3h3	100	64.870	ENSOARG00000000808	ZC3H3	100	65.010	Ovis_aries
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.010	ENSPPAG00000035455	ZC3H3	87	69.529	Pan_paniscus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.207	ENSPPRG00000011707	ZC3H3	100	68.998	Panthera_pardus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	70.094	ENSPTRG00000020655	ZC3H3	100	69.780	Pan_troglodytes
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.634	ENSPANG00000016578	ZC3H3	100	69.780	Papio_anubis
MGP_CAROLIEiJ_G0019897	Zc3h3	100	86.149	ENSPEMG00000013893	Zc3h3	100	86.044	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019897	Zc3h3	72	42.088	ENSPFOG00000023405	zc3h3	65	44.466	Poecilia_formosa
MGP_CAROLIEiJ_G0019897	Zc3h3	72	41.919	ENSPLAG00000001686	zc3h3	66	44.275	Poecilia_latipinna
MGP_CAROLIEiJ_G0019897	Zc3h3	100	38.346	ENSPMEG00000002341	zc3h3	66	44.847	Poecilia_mexicana
MGP_CAROLIEiJ_G0019897	Zc3h3	72	42.424	ENSPREG00000008923	zc3h3	66	44.847	Poecilia_reticulata
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.916	ENSPPYG00000018935	ZC3H3	99	70.199	Pongo_abelii
MGP_CAROLIEiJ_G0019897	Zc3h3	100	71.757	ENSPCOG00000028174	ZC3H3	100	72.670	Propithecus_coquereli
MGP_CAROLIEiJ_G0019897	Zc3h3	88	72.446	ENSPVAG00000005979	ZC3H3	88	72.136	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019897	Zc3h3	63	44.828	ENSPNYG00000023105	zc3h3	65	44.828	Pundamilia_nyererei
MGP_CAROLIEiJ_G0019897	Zc3h3	57	40.172	ENSPNAG00000009850	zc3h3	64	38.854	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.561	ENSRBIG00000039855	ZC3H3	100	69.738	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.561	ENSRROG00000040493	ZC3H3	100	69.634	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019897	Zc3h3	100	69.447	ENSSBOG00000021819	ZC3H3	100	70.262	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019897	Zc3h3	65	42.500	ENSSMAG00000016302	zc3h3	65	42.936	Scophthalmus_maximus
MGP_CAROLIEiJ_G0019897	Zc3h3	62	45.076	ENSSDUG00000021871	zc3h3	62	44.886	Seriola_dumerili
MGP_CAROLIEiJ_G0019897	Zc3h3	62	44.697	ENSSLDG00000016166	zc3h3	62	44.508	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0019897	Zc3h3	61	42.775	ENSSPAG00000008518	zc3h3	62	43.133	Stegastes_partitus
MGP_CAROLIEiJ_G0019897	Zc3h3	100	64.301	ENSSSCG00000006956	ZC3H3	99	64.718	Sus_scrofa
MGP_CAROLIEiJ_G0019897	Zc3h3	65	57.945	ENSTBEG00000009096	-	74	58.654	Tupaia_belangeri
MGP_CAROLIEiJ_G0019897	Zc3h3	91	69.390	ENSUAMG00000012919	ZC3H3	98	70.000	Ursus_americanus
MGP_CAROLIEiJ_G0019897	Zc3h3	99	67.906	ENSVVUG00000022609	ZC3H3	98	68.684	Vulpes_vulpes
MGP_CAROLIEiJ_G0019897	Zc3h3	63	50.286	ENSXETG00000004937	zc3h3	72	50.669	Xenopus_tropicalis
MGP_CAROLIEiJ_G0019897	Zc3h3	58	40.102	ENSXCOG00000005025	zc3h3	72	40.550	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0019897	Zc3h3	64	44.316	ENSXMAG00000006422	zc3h3	66	44.316	Xiphophorus_maculatus