EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019913 (Gene tree)
Gene ID: 110310815
Gene Symbol: Plec
Alias: Plec1
Full Name: plectin
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 64652 bases
Position: chr15:70116526-70181177
Accession: 110310815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038592	S10_plectin	PF03501.15	1.3e-35	1	1
MGP_CAROLIEiJ_P0038589	S10_plectin	PF03501.15	5.4e-35	1	1
MGP_CAROLIEiJ_P0038583	S10_plectin	PF03501.15	5.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038599	-	691	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038590	-	15009	-	MGP_CAROLIEiJ_P0038590	4543 (aa)	-	-
MGP_CAROLIEiJ_T0038588	-	14995	-	MGP_CAROLIEiJ_P0038588	4543 (aa)	-	-
MGP_CAROLIEiJ_T0038589	-	15446	XM_021183919	MGP_CAROLIEiJ_P0038589	4686 (aa)	XP_021039578	UPI000A317774
MGP_CAROLIEiJ_T0038584	-	14979	-	MGP_CAROLIEiJ_P0038584	4589 (aa)	-	-
MGP_CAROLIEiJ_T0038585	-	14966	-	MGP_CAROLIEiJ_P0038585	4386 (aa)	-	-
MGP_CAROLIEiJ_T0038586	-	14862	XM_021183920	MGP_CAROLIEiJ_P0038586	4534 (aa)	XP_021039579	UPI000A31561D
MGP_CAROLIEiJ_T0038587	-	14949	-	MGP_CAROLIEiJ_P0038587	4550 (aa)	-	-
MGP_CAROLIEiJ_T0038580	-	18833	-	MGP_CAROLIEiJ_P0038580	4511 (aa)	-	-
MGP_CAROLIEiJ_T0038581	-	14924	XM_021183921	MGP_CAROLIEiJ_P0038581	4521 (aa)	XP_021039580	UPI000A31B1FB
MGP_CAROLIEiJ_T0038582	-	15012	-	MGP_CAROLIEiJ_P0038582	4548 (aa)	-	-
MGP_CAROLIEiJ_T0038583	-	15462	-	MGP_CAROLIEiJ_P0038583	4691 (aa)	-	-
MGP_CAROLIEiJ_T0038593	-	2145	-	MGP_CAROLIEiJ_P0038593	661 (aa)	-	UPI000016C904
MGP_CAROLIEiJ_T0038598	-	316	-	MGP_CAROLIEiJ_P0038598	53 (aa)	-	UPI0003F485DE
MGP_CAROLIEiJ_T0038595	-	2099	-	MGP_CAROLIEiJ_P0038595	499 (aa)	-	UPI0001F78E01
MGP_CAROLIEiJ_T0038592	-	3075	-	MGP_CAROLIEiJ_P0038592	964 (aa)	-	-
MGP_CAROLIEiJ_T0038594	-	2219	-	MGP_CAROLIEiJ_P0038594	702 (aa)	-	UPI000016C906
MGP_CAROLIEiJ_T0038596	-	2078	-	MGP_CAROLIEiJ_P0038596	676 (aa)	-	UPI0001F78E02
MGP_CAROLIEiJ_T0038591	-	4937	-	MGP_CAROLIEiJ_P0038591	1645 (aa)	-	-
MGP_CAROLIEiJ_T0038597	-	254	-	MGP_CAROLIEiJ_P0038597	43 (aa)	-	UPI00001822FF

Gene Model

Click here to download MGP_CAROLIEiJ_G0019913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019913	Plec	100	93.561	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0019913	Plec	100	93.090	ENSANAG00000032431	PLEC	100	93.090	Aotus_nancymaae
MGP_CAROLIEiJ_G0019913	Plec	100	92.554	ENSBTAG00000011922	PLEC	100	92.554	Bos_taurus
MGP_CAROLIEiJ_G0019913	Plec	100	93.325	ENSCJAG00000021472	PLEC	100	93.325	Callithrix_jacchus
MGP_CAROLIEiJ_G0019913	Plec	100	92.455	ENSCAFG00000001433	PLEC	100	92.455	Canis_familiaris
MGP_CAROLIEiJ_G0019913	Plec	88	92.471	ENSCHIG00000022260	PLEC	99	92.471	Capra_hircus
MGP_CAROLIEiJ_G0019913	Plec	100	93.966	ENSTSYG00000033419	PLEC	100	93.966	Carlito_syrichta
MGP_CAROLIEiJ_G0019913	Plec	100	91.701	ENSCAPG00000013570	PLEC	100	92.805	Cavia_aperea
MGP_CAROLIEiJ_G0019913	Plec	100	94.917	ENSCPOG00000007957	PLEC	100	94.672	Cavia_porcellus
MGP_CAROLIEiJ_G0019913	Plec	100	93.325	ENSCCAG00000031237	PLEC	100	93.325	Cebus_capucinus
MGP_CAROLIEiJ_G0019913	Plec	100	93.945	ENSCATG00000009349	PLEC	100	93.945	Cercocebus_atys
MGP_CAROLIEiJ_G0019913	Plec	100	95.643	ENSCLAG00000012830	PLEC	100	94.650	Chinchilla_lanigera
MGP_CAROLIEiJ_G0019913	Plec	100	79.257	ENSCPBG00000021974	PLEC	99	72.665	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0019913	Plec	100	97.822	ENSCGRG00001019864	Plec	100	97.421	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0019913	Plec	100	96.652	ENSCGRG00000002714	Plec	100	96.652	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0019913	Plec	96	89.935	ENSDNOG00000031742	PLEC	99	89.935	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0019913	Plec	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
MGP_CAROLIEiJ_G0019913	Plec	83	96.636	ENSEEUG00000004554	-	67	96.942	Erinaceus_europaeus
MGP_CAROLIEiJ_G0019913	Plec	100	92.383	ENSFCAG00000042897	PLEC	100	92.383	Felis_catus
MGP_CAROLIEiJ_G0019913	Plec	100	95.436	ENSFDAG00000011856	PLEC	100	94.416	Fukomys_damarensis
MGP_CAROLIEiJ_G0019913	Plec	100	92.658	ENSGGOG00000012217	PLEC	100	92.125	Gorilla_gorilla
MGP_CAROLIEiJ_G0019913	Plec	100	95.021	ENSHGLG00000012646	PLEC	100	94.389	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0019913	Plec	100	92.539	ENSHGLG00100011759	PLEC	100	83.316	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0019913	Plec	100	93.786	ENSSTOG00000023061	PLEC	100	93.786	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0019913	Plec	100	95.586	ENSJJAG00000012390	Plec	100	95.608	Jaculus_jaculus
MGP_CAROLIEiJ_G0019913	Plec	100	93.902	ENSMFAG00000032066	PLEC	100	93.902	Macaca_fascicularis
MGP_CAROLIEiJ_G0019913	Plec	100	92.658	ENSMMUG00000000388	PLEC	100	90.636	Macaca_mulatta
MGP_CAROLIEiJ_G0019913	Plec	100	93.866	ENSMNEG00000011406	PLEC	100	93.859	Macaca_nemestrina
MGP_CAROLIEiJ_G0019913	Plec	100	92.554	ENSMLEG00000033296	PLEC	100	93.527	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0019913	Plec	100	97.315	ENSMAUG00000001116	Plec	100	97.315	Mesocricetus_auratus
MGP_CAROLIEiJ_G0019913	Plec	100	93.647	ENSMICG00000016160	PLEC	100	93.647	Microcebus_murinus
MGP_CAROLIEiJ_G0019913	Plec	100	97.718	ENSMOCG00000000674	Plec	100	97.293	Microtus_ochrogaster
MGP_CAROLIEiJ_G0019913	Plec	100	99.793	ENSMUSG00000022565	Plec	100	99.793	Mus_musculus
MGP_CAROLIEiJ_G0019913	Plec	100	99.378	MGP_PahariEiJ_G0019923	Plec	100	99.378	Mus_pahari
MGP_CAROLIEiJ_G0019913	Plec	100	99.702	MGP_SPRETEiJ_G0020816	Plec	100	99.702	Mus_spretus
MGP_CAROLIEiJ_G0019913	Plec	100	90.463	ENSMPUG00000007329	PLEC	100	90.548	Mustela_putorius_furo
MGP_CAROLIEiJ_G0019913	Plec	100	96.992	ENSNGAG00000008931	Plec	100	96.505	Nannospalax_galili
MGP_CAROLIEiJ_G0019913	Plec	98	92.743	ENSMEUG00000004499	-	70	92.743	Notamacropus_eugenii
MGP_CAROLIEiJ_G0019913	Plec	91	91.958	ENSOPRG00000015206	PLEC	69	90.895	Ochotona_princeps
MGP_CAROLIEiJ_G0019913	Plec	100	95.436	ENSODEG00000014671	PLEC	100	95.436	Octodon_degus
MGP_CAROLIEiJ_G0019913	Plec	85	92.393	ENSOCUG00000023075	-	100	92.963	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0019913	Plec	100	77.618	ENSOARG00000015846	-	100	74.089	Ovis_aries
MGP_CAROLIEiJ_G0019913	Plec	100	92.037	ENSPPAG00000042112	PLEC	100	88.998	Pan_paniscus
MGP_CAROLIEiJ_G0019913	Plec	100	93.731	ENSPTRG00000020672	PLEC	100	93.731	Pan_troglodytes
MGP_CAROLIEiJ_G0019913	Plec	100	93.667	ENSPANG00000023403	-	100	93.667	Papio_anubis
MGP_CAROLIEiJ_G0019913	Plec	100	97.701	ENSPEMG00000011922	Plec	100	97.701	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0019913	Plec	100	87.565	ENSPCIG00000014981	PLEC	100	83.065	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0019913	Plec	100	93.710	ENSPCOG00000023279	PLEC	100	93.710	Propithecus_coquereli
MGP_CAROLIEiJ_G0019913	Plec	100	92.401	ENSPVAG00000009376	PLEC	91	92.622	Pteropus_vampyrus
MGP_CAROLIEiJ_G0019913	Plec	100	98.379	ENSRNOG00000023781	Plec	100	98.379	Rattus_norvegicus
MGP_CAROLIEiJ_G0019913	Plec	100	92.427	ENSRBIG00000041068	PLEC	61	84.169	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0019913	Plec	100	93.777	ENSRROG00000015881	PLEC	100	93.777	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0019913	Plec	100	90.832	ENSSBOG00000025259	PLEC	100	90.832	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0019913	Plec	100	85.492	ENSSHAG00000009020	PLEC	99	80.350	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0019913	Plec	100	86.515	ENSTTRG00000010427	PLEC	95	90.134	Tursiops_truncatus
MGP_CAROLIEiJ_G0019913	Plec	100	92.050	ENSVVUG00000010214	PLEC	100	92.050	Vulpes_vulpes