EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0019922 (Gene tree)
Gene ID: 110310465
Gene Symbol: Sharpin
Alias: 0610041B22Rik|SIPL1|cpdm
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 4007 bases
Position: chr15:70295423-70299429
Accession: 110310465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038638	zf-RanBP	PF00641.18	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038636	-	1878	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038637	-	1645	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038634	-	1872	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038635	-	1711	XM_021183451	MGP_CAROLIEiJ_P0038635	376 (aa)	XP_021039110	UPI000A31B2C2
MGP_CAROLIEiJ_T0038638	-	407	-	MGP_CAROLIEiJ_P0038638	82 (aa)	-	-
MGP_CAROLIEiJ_T0038639	-	773	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038643	-	1854	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038642	-	824	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038641	-	806	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0038640	-	823	-	MGP_CAROLIEiJ_P0038640	153 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0019922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0019922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0019922	Sharpin	100	72.093	ENSG00000179526	SHARPIN	91	72.093	Homo_sapiens
MGP_CAROLIEiJ_G0019922	Sharpin	100	98.780	ENSMUSG00000022552	Sharpin	99	98.780	Mus_musculus
MGP_CAROLIEiJ_G0019922	Sharpin	100	96.341	MGP_PahariEiJ_G0019932	Sharpin	100	96.341	Mus_pahari
MGP_CAROLIEiJ_G0019922	Sharpin	100	97.561	MGP_SPRETEiJ_G0020825	Sharpin	100	97.561	Mus_spretus