EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020006 (Gene tree)
Gene ID: 110310252
Gene Symbol: Polr2f
Alias: 1810060D16Rik|RNA Pol II
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9343 bases
Position: chr15:73138908-73148250
Accession: 110310252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0038918	RNA_pol_Rpb6	PF01192.22	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0038918	-	556	XM_021183029	MGP_CAROLIEiJ_P0038918	127 (aa)	XP_021038688	UPI00000019E5

Gene Model

Click here to download MGP_CAROLIEiJ_G0020006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSG00000100142	POLR2F	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSAPOG00000002902	polr2f	100	88.189	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSAMEG00000010331	POLR2F	100	98.425	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSACIG00000000923	polr2f	100	88.189	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSAOCG00000003182	polr2f	100	88.976	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSAPEG00000012999	polr2f	100	88.976	Amphiprion_percula
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSATEG00000008929	polr2f	100	88.189	Anabas_testudineus
MGP_CAROLIEiJ_G0020006	Polr2f	80	97.030	ENSAPLG00000015235	POLR2F	85	96.226	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSACAG00000015288	POLR2F	100	98.425	Anolis_carolinensis
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSANAG00000020840	POLR2F	100	99.213	Aotus_nancymaae
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSACLG00000016129	polr2f	100	88.976	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020006	Polr2f	100	90.551	ENSAMXG00000012812	polr2f	100	90.551	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSBTAG00000004820	POLR2F	100	99.213	Bos_taurus
MGP_CAROLIEiJ_G0020006	Polr2f	63	77.500	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCJAG00000048241	POLR2F	100	99.213	Callithrix_jacchus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSCAFG00000001437	POLR2F	100	98.425	Canis_familiaris
MGP_CAROLIEiJ_G0020006	Polr2f	95	98.347	ENSCHIG00000012907	POLR2F	95	98.347	Capra_hircus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSTSYG00000008187	POLR2F	100	98.425	Carlito_syrichta
MGP_CAROLIEiJ_G0020006	Polr2f	94	99.167	ENSCAPG00000013419	POLR2F	94	99.167	Cavia_aperea
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCPOG00000034094	POLR2F	100	99.213	Cavia_porcellus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCCAG00000036489	POLR2F	100	99.213	Cebus_capucinus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCATG00000041014	POLR2F	100	99.213	Cercocebus_atys
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCLAG00000017167	POLR2F	100	99.213	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCSAG00000006862	POLR2F	100	99.213	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020006	Polr2f	95	97.521	ENSCPBG00000023030	POLR2F	62	97.521	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020006	Polr2f	83	73.585	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCANG00000041884	POLR2F	100	99.213	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCGRG00001023541	POLR2F	100	99.213	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSCGRG00000011921	POLR2F	100	99.213	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020006	Polr2f	83	89.623	ENSCSEG00000006848	polr2f	83	89.623	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSCVAG00000010437	polr2f	100	87.402	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	ENSDARG00000036625	polr2f	100	86.614	Danio_rerio
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSDNOG00000005884	POLR2F	100	99.213	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSDORG00000024789	Polr2f	100	99.213	Dipodomys_ordii
MGP_CAROLIEiJ_G0020006	Polr2f	80	72.115	FBgn0003275	RpII18	78	71.569	Drosophila_melanogaster
MGP_CAROLIEiJ_G0020006	Polr2f	56	77.465	ENSEBUG00000008509	polr2f	73	77.465	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020006	Polr2f	72	70.330	ENSEBUG00000002842	-	90	62.500	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020006	Polr2f	72	97.802	ENSEASG00005018802	-	82	97.802	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSEEUG00000011014	POLR2F	100	96.850	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	ENSELUG00000000319	polr2f	100	86.614	Esox_lucius
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSFCAG00000002806	POLR2F	100	98.425	Felis_catus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSFDAG00000009926	POLR2F	100	99.213	Fukomys_damarensis
MGP_CAROLIEiJ_G0020006	Polr2f	88	87.500	ENSFHEG00000005448	polr2f	84	87.736	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020006	Polr2f	100	82.677	ENSGMOG00000009967	polr2f	100	82.677	Gadus_morhua
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSGALG00000012291	POLR2F	100	96.850	Gallus_gallus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSGAFG00000017573	polr2f	100	88.189	Gambusia_affinis
MGP_CAROLIEiJ_G0020006	Polr2f	100	84.252	ENSGACG00000007322	polr2f	100	84.252	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSGAGG00000021757	POLR2F	100	98.425	Gopherus_agassizii
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSGGOG00000005213	POLR2F	100	99.213	Gorilla_gorilla
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSHBUG00000022089	polr2f	100	88.976	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSHGLG00000018942	POLR2F	100	99.213	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSHGLG00100012851	POLR2F	100	99.213	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	ENSHCOG00000006149	polr2f	100	86.614	Hippocampus_comes
MGP_CAROLIEiJ_G0020006	Polr2f	76	90.722	ENSIPUG00000000814	polr2f	100	90.722	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSSTOG00000025722	POLR2F	100	99.213	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSJJAG00000008097	Polr2f	100	99.213	Jaculus_jaculus
MGP_CAROLIEiJ_G0020006	Polr2f	100	89.764	ENSKMAG00000014230	polr2f	100	89.764	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020006	Polr2f	83	88.679	ENSLBEG00000008383	polr2f	88	88.679	Labrus_bergylta
MGP_CAROLIEiJ_G0020006	Polr2f	100	93.701	ENSLACG00000003931	POLR2F	100	93.701	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.692	ENSLOCG00000011827	polr2f	100	87.692	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSLAFG00000012632	POLR2F	100	99.213	Loxodonta_africana
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMFAG00000033687	POLR2F	100	99.213	Macaca_fascicularis
MGP_CAROLIEiJ_G0020006	Polr2f	95	98.347	ENSMMUG00000038231	POLR2F	99	98.347	Macaca_mulatta
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMNEG00000044365	POLR2F	100	99.213	Macaca_nemestrina
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMLEG00000033077	POLR2F	100	99.213	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSMAMG00000008056	polr2f	100	88.976	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSMZEG00005005705	polr2f	100	88.976	Maylandia_zebra
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSMGAG00000012504	POLR2F	100	96.850	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMAUG00000018586	Polr2f	100	99.213	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMICG00000013128	POLR2F	100	99.213	Microcebus_murinus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSMOCG00000000237	Polr2f	100	99.213	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSMMOG00000005106	polr2f	100	88.976	Mola_mola
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSMODG00000019063	POLR2F	100	96.850	Monodelphis_domestica
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSMALG00000001444	polr2f	100	88.976	Monopterus_albus
MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	ENSMUSG00000033020	Polr2f	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	MGP_PahariEiJ_G0020008	Polr2f	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	MGP_SPRETEiJ_G0020904	Polr2f	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSMPUG00000012997	POLR2F	100	98.425	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020006	Polr2f	98	92.742	ENSMLUG00000029612	-	98	92.742	Myotis_lucifugus
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.899	ENSMLUG00000014315	-	100	96.899	Myotis_lucifugus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSNGAG00000020682	Polr2f	100	99.213	Nannospalax_galili
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSNBRG00000002492	polr2f	100	88.189	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSNLEG00000014987	-	100	99.213	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSODEG00000014123	POLR2F	100	99.213	Octodon_degus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSONIG00000008394	polr2f	100	88.189	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSOANG00000014684	POLR2F	100	98.425	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSOCUG00000012064	POLR2F	100	99.213	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020006	Polr2f	100	86.614	ENSORLG00000014580	polr2f	100	86.614	Oryzias_latipes
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSORLG00020006910	polr2f	100	87.402	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020006	Polr2f	94	82.500	ENSORLG00015015332	polr2f	77	85.965	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020006	Polr2f	80	85.294	ENSOMEG00000006530	polr2f	65	80.000	Oryzias_melastigma
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSOGAG00000025463	POLR2F	100	99.213	Otolemur_garnettii
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSOARG00000014692	POLR2F	100	99.213	Ovis_aries
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPPAG00000024276	POLR2F	100	99.213	Pan_paniscus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSPPRG00000013030	POLR2F	100	98.425	Panthera_pardus
MGP_CAROLIEiJ_G0020006	Polr2f	95	95.868	ENSPTIG00000000632	POLR2F	99	95.868	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPTRG00000014356	POLR2F	100	99.213	Pan_troglodytes
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPANG00000023979	POLR2F	100	99.213	Papio_anubis
MGP_CAROLIEiJ_G0020006	Polr2f	100	90.551	ENSPKIG00000002464	polr2f	100	90.551	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020006	Polr2f	56	98.592	ENSPSIG00000013913	POLR2F	100	98.592	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSPMGG00000009619	polr2f	100	88.976	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPEMG00000008322	Polr2f	100	99.213	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSPCIG00000012000	-	100	96.850	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSPFOG00000000139	polr2f	100	87.402	Poecilia_formosa
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSPLAG00000000988	polr2f	100	87.402	Poecilia_latipinna
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSPMEG00000019063	polr2f	100	87.402	Poecilia_mexicana
MGP_CAROLIEiJ_G0020006	Polr2f	77	87.755	ENSPREG00000016749	polr2f	100	87.755	Poecilia_reticulata
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPPYG00000011809	POLR2F	100	99.213	Pongo_abelii
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSPCOG00000025716	POLR2F	100	99.213	Propithecus_coquereli
MGP_CAROLIEiJ_G0020006	Polr2f	79	99.000	ENSPVAG00000010107	POLR2F	64	99.000	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSPNYG00000019790	polr2f	100	88.976	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020006	Polr2f	100	89.764	ENSPNAG00000009017	polr2f	100	89.764	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	ENSRNOG00000011214	Polr2f	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSRBIG00000044878	POLR2F	100	99.213	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSRROG00000019586	POLR2F	100	99.213	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020006	Polr2f	100	99.213	ENSSBOG00000023340	POLR2F	100	99.213	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020006	Polr2f	100	96.850	ENSSHAG00000008502	POLR2F	100	96.850	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020006	Polr2f	100	89.764	ENSSFOG00015012810	polr2f	100	89.764	Scleropages_formosus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	ENSSMAG00000005354	polr2f	100	88.189	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSSDUG00000016273	polr2f	100	88.976	Seriola_dumerili
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSSLDG00000024895	polr2f	100	88.976	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSSPUG00000011343	POLR2F	100	98.425	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSSPAG00000019646	polr2f	100	88.976	Stegastes_partitus
MGP_CAROLIEiJ_G0020006	Polr2f	100	100.000	ENSSSCG00000000116	POLR2F	100	100.000	Sus_scrofa
MGP_CAROLIEiJ_G0020006	Polr2f	69	97.727	ENSTGUG00000016504	-	100	97.727	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020006	Polr2f	100	97.638	ENSTGUG00000010476	POLR2F	93	97.638	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020006	Polr2f	100	89.764	ENSTRUG00000021130	polr2f	71	89.764	Takifugu_rubripes
MGP_CAROLIEiJ_G0020006	Polr2f	100	88.976	ENSTNIG00000010827	polr2f	100	88.976	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020006	Polr2f	79	99.000	ENSTTRG00000004817	POLR2F	64	99.000	Tursiops_truncatus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSUAMG00000020504	POLR2F	100	98.425	Ursus_americanus
MGP_CAROLIEiJ_G0020006	Polr2f	100	98.425	ENSUMAG00000015052	POLR2F	100	98.425	Ursus_maritimus
MGP_CAROLIEiJ_G0020006	Polr2f	95	97.521	ENSVVUG00000024021	POLR2F	92	97.521	Vulpes_vulpes
MGP_CAROLIEiJ_G0020006	Polr2f	100	93.701	ENSXETG00000006346	polr2f	100	93.701	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSXCOG00000015983	polr2f	100	87.402	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020006	Polr2f	100	87.402	ENSXMAG00000001559	polr2f	100	87.402	Xiphophorus_maculatus