EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020042 (Gene tree)
Gene ID: 110310396
Gene Symbol: Fam83f
Alias: -
Full Name: family with sequence similarity 83 member F
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 29041 bases
Position: chr15:74694224-74723264
Accession: 110310396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039051	FAM83	PF07894.12	3.2e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039051	-	2987	XM_021183322	MGP_CAROLIEiJ_P0039051	495 (aa)	XP_021038981	UPI000A31A68C

Gene Model

Click here to download MGP_CAROLIEiJ_G0020042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020042	Fam83f	56	35.587	MGP_CAROLIEiJ_G0019807	Fam83a	93	33.058
MGP_CAROLIEiJ_G0020042	Fam83f	59	40.532	MGP_CAROLIEiJ_G0029741	Fam83e	61	40.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.770	ENSG00000133477	FAM83F	100	79.167	Homo_sapiens
MGP_CAROLIEiJ_G0020042	Fam83f	71	79.830	ENSAMEG00000011020	FAM83F	99	79.830	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020042	Fam83f	99	55.865	ENSAPLG00000009665	FAM83F	99	55.666	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020042	Fam83f	100	54.389	ENSACAG00000007387	FAM83F	100	54.008	Anolis_carolinensis
MGP_CAROLIEiJ_G0020042	Fam83f	100	75.197	ENSANAG00000027381	FAM83F	100	75.000	Aotus_nancymaae
MGP_CAROLIEiJ_G0020042	Fam83f	100	77.407	ENSBTAG00000014247	FAM83F	100	78.389	Bos_taurus
MGP_CAROLIEiJ_G0020042	Fam83f	100	75.591	ENSCJAG00000002721	FAM83F	100	74.409	Callithrix_jacchus
MGP_CAROLIEiJ_G0020042	Fam83f	70	77.493	ENSCAFG00000001288	FAM83F	100	77.493	Canis_familiaris
MGP_CAROLIEiJ_G0020042	Fam83f	98	78.182	ENSCAFG00020002339	FAM83F	96	78.384	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020042	Fam83f	100	77.515	ENSCHIG00000026060	FAM83F	100	78.501	Capra_hircus
MGP_CAROLIEiJ_G0020042	Fam83f	99	78.758	ENSTSYG00000028609	FAM83F	100	79.359	Carlito_syrichta
MGP_CAROLIEiJ_G0020042	Fam83f	80	76.500	ENSCAPG00000004680	FAM83F	100	76.500	Cavia_aperea
MGP_CAROLIEiJ_G0020042	Fam83f	100	76.634	ENSCPOG00000014133	FAM83F	100	76.634	Cavia_porcellus
MGP_CAROLIEiJ_G0020042	Fam83f	100	76.134	ENSCCAG00000026740	FAM83F	100	75.937	Cebus_capucinus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.175	ENSCATG00000035519	FAM83F	100	78.571	Cercocebus_atys
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.020	ENSCLAG00000016721	FAM83F	100	77.822	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.373	ENSCSAG00000006058	FAM83F	100	78.770	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020042	Fam83f	81	76.485	ENSCHOG00000010532	FAM83F	95	78.117	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0020042	Fam83f	93	58.974	ENSCPBG00000022941	FAM83F	92	58.547	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020042	Fam83f	90	76.484	ENSCANG00000030851	FAM83F	100	77.083	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020042	Fam83f	100	87.751	ENSCGRG00001018899	Fam83f	100	87.349	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020042	Fam83f	76	87.335	ENSCGRG00000016702	Fam83f	100	86.807	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020042	Fam83f	100	75.149	ENSDNOG00000046641	FAM83F	100	75.944	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020042	Fam83f	89	79.195	ENSDORG00000013192	Fam83f	96	79.642	Dipodomys_ordii
MGP_CAROLIEiJ_G0020042	Fam83f	98	70.707	ENSETEG00000016860	FAM83F	100	71.717	Echinops_telfairi
MGP_CAROLIEiJ_G0020042	Fam83f	99	80.716	ENSEASG00005005338	FAM83F	99	80.119	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020042	Fam83f	100	80.157	ENSECAG00000009129	FAM83F	100	80.943	Equus_caballus
MGP_CAROLIEiJ_G0020042	Fam83f	57	69.825	ENSEEUG00000001255	-	100	69.825	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.252	ENSFCAG00000013509	FAM83F	100	79.417	Felis_catus
MGP_CAROLIEiJ_G0020042	Fam83f	93	59.958	ENSFALG00000012211	FAM83F	90	59.110	Ficedula_albicollis
MGP_CAROLIEiJ_G0020042	Fam83f	68	77.907	ENSFDAG00000006165	FAM83F	100	78.488	Fukomys_damarensis
MGP_CAROLIEiJ_G0020042	Fam83f	100	54.389	ENSGALG00000045936	FAM83F	81	54.008	Gallus_gallus
MGP_CAROLIEiJ_G0020042	Fam83f	92	60.213	ENSGAGG00000007869	FAM83F	97	59.574	Gopherus_agassizii
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.968	ENSGGOG00000006871	FAM83F	100	79.365	Gorilla_gorilla
MGP_CAROLIEiJ_G0020042	Fam83f	100	80.000	ENSHGLG00000017812	FAM83F	100	80.594	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020042	Fam83f	95	79.375	ENSHGLG00100004088	FAM83F	99	80.000	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020042	Fam83f	83	76.190	ENSSTOG00000023057	FAM83F	86	78.750	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020042	Fam83f	98	85.744	ENSJJAG00000011999	Fam83f	99	85.744	Jaculus_jaculus
MGP_CAROLIEiJ_G0020042	Fam83f	61	45.955	ENSLACG00000011004	FAM83F	100	45.741	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020042	Fam83f	85	77.283	ENSLAFG00000016675	FAM83F	100	77.674	Loxodonta_africana
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.373	ENSMFAG00000002020	FAM83F	100	78.770	Macaca_fascicularis
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.373	ENSMMUG00000017166	FAM83F	100	78.770	Macaca_mulatta
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.175	ENSMNEG00000033076	FAM83F	100	78.571	Macaca_nemestrina
MGP_CAROLIEiJ_G0020042	Fam83f	82	79.853	ENSMLEG00000034781	FAM83F	99	79.853	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020042	Fam83f	99	55.098	ENSMGAG00000012348	FAM83F	98	55.489	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020042	Fam83f	100	86.228	ENSMAUG00000015744	Fam83f	100	85.429	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.458	ENSMICG00000016129	FAM83F	100	78.458	Microcebus_murinus
MGP_CAROLIEiJ_G0020042	Fam83f	100	82.932	ENSMOCG00000003997	Fam83f	100	82.731	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020042	Fam83f	69	61.560	ENSMODG00000008966	-	99	60.724	Monodelphis_domestica
MGP_CAROLIEiJ_G0020042	Fam83f	100	97.576	ENSMUSG00000022408	Fam83f	100	97.576	Mus_musculus
MGP_CAROLIEiJ_G0020042	Fam83f	100	94.343	MGP_PahariEiJ_G0020044	Fam83f	100	94.141	Mus_pahari
MGP_CAROLIEiJ_G0020042	Fam83f	100	97.778	MGP_SPRETEiJ_G0020940	Fam83f	100	97.778	Mus_spretus
MGP_CAROLIEiJ_G0020042	Fam83f	98	79.596	ENSMLUG00000015534	FAM83F	99	79.596	Myotis_lucifugus
MGP_CAROLIEiJ_G0020042	Fam83f	100	83.466	ENSNGAG00000020952	Fam83f	100	83.865	Nannospalax_galili
MGP_CAROLIEiJ_G0020042	Fam83f	100	80.159	ENSNLEG00000015307	FAM83F	100	79.960	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020042	Fam83f	64	65.506	ENSMEUG00000004881	-	97	65.506	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020042	Fam83f	55	68.531	ENSOPRG00000000702	-	54	74.825	Ochotona_princeps
MGP_CAROLIEiJ_G0020042	Fam83f	100	76.832	ENSODEG00000012376	FAM83F	100	76.832	Octodon_degus
MGP_CAROLIEiJ_G0020042	Fam83f	88	74.550	ENSOCUG00000014060	FAM83F	99	75.225	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.571	ENSOGAG00000030522	FAM83F	100	78.571	Otolemur_garnettii
MGP_CAROLIEiJ_G0020042	Fam83f	81	77.114	ENSOARG00000017179	FAM83F	93	75.369	Ovis_aries
MGP_CAROLIEiJ_G0020042	Fam83f	88	76.906	ENSPPAG00000027631	FAM83F	100	78.475	Pan_paniscus
MGP_CAROLIEiJ_G0020042	Fam83f	100	79.297	ENSPPRG00000021618	FAM83F	100	80.469	Panthera_pardus
MGP_CAROLIEiJ_G0020042	Fam83f	81	74.083	ENSPTIG00000021999	FAM83F	79	74.146	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020042	Fam83f	100	79.167	ENSPTRG00000014405	FAM83F	100	79.563	Pan_troglodytes
MGP_CAROLIEiJ_G0020042	Fam83f	100	77.976	ENSPANG00000016392	FAM83F	100	78.373	Papio_anubis
MGP_CAROLIEiJ_G0020042	Fam83f	54	48.084	ENSPSIG00000010230	FAM83F	100	47.387	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020042	Fam83f	100	84.739	ENSPEMG00000010602	Fam83f	100	84.739	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020042	Fam83f	100	64.591	ENSPCIG00000020369	FAM83F	100	63.938	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.770	ENSPPYG00000011847	FAM83F	100	79.365	Pongo_abelii
MGP_CAROLIEiJ_G0020042	Fam83f	79	86.254	ENSPCAG00000008047	FAM83F	79	86.254	Procavia_capensis
MGP_CAROLIEiJ_G0020042	Fam83f	100	80.473	ENSPCOG00000016351	FAM83F	100	80.079	Propithecus_coquereli
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.063	ENSPVAG00000004972	FAM83F	100	79.447	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020042	Fam83f	100	89.000	ENSRNOG00000018330	Fam83f	100	89.400	Rattus_norvegicus
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.571	ENSRBIG00000028821	FAM83F	100	78.968	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020042	Fam83f	100	78.571	ENSRROG00000031286	FAM83F	100	78.968	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020042	Fam83f	93	74.788	ENSSBOG00000024462	FAM83F	100	73.517	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020042	Fam83f	66	63.063	ENSSHAG00000011148	-	99	63.664	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020042	Fam83f	100	58.627	ENSSPUG00000010758	FAM83F	100	57.843	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020042	Fam83f	99	75.634	ENSSSCG00000000079	FAM83F	99	77.193	Sus_scrofa
MGP_CAROLIEiJ_G0020042	Fam83f	93	60.169	ENSTGUG00000010169	FAM83F	100	59.322	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020042	Fam83f	100	74.753	ENSTBEG00000005578	FAM83F	100	75.740	Tupaia_belangeri
MGP_CAROLIEiJ_G0020042	Fam83f	68	65.889	ENSTTRG00000011451	-	99	66.472	Tursiops_truncatus
MGP_CAROLIEiJ_G0020042	Fam83f	100	75.098	ENSUAMG00000007221	FAM83F	100	75.882	Ursus_americanus